LOC120571115


Basic Information

Item Value
gene id LOC120571115
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 32538277 ~ 32566162 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039819805.1
aagcagcagcagctgtttttTTGTGGCCCGACACAGAGCACAAAAACATGGTCCAACCGGCAGATAAAACTACGTTTTCAAAGCGAGAGAAGAGTCTGGTTCcgtgaaaatgtatttcttcGCAGTGTTTGTCCTTTTGGGGACAGGACTGGCGGTAAACGGCGAGATTCATTCCCTCACTTACATCTCCAAACCTGTCGGACTCCCGGGCATCCACGAGTTCACAGCCATGGGTCTGCTGGACGGCAGGATGATCGACTACTTTGACAGCGACAACCAGAAGAAAGTTCCCAAACAGGCCTGGATGAAAGAGCGACTGTCTGAAGATTACTGGGACAAAGGCACCCAGTCCCGCCAGAGCAAGCAGCAGTGGTTCAAAGTCAACATCAACATCCTGAAGGAACGAATGAGACAGAATGACACGGACCTCCATATTCTCCAGTGGATCGTCAGCTGCGAAGGCGAAATGAAGGACGGAAAGATGAAGTTCATACGTGGCATTAACATGTACGGCTACGATGGAAACGACTTCCTGTCATTTGATGAAGTCAACGGCGTCTGGGTTGCCCCAACTGACGCGGCAGTCCAGACCAAGACAAAGTGGGACGAAGTCCTAAAAGAATCCACCAAAGGCTACCTGGAGAACGAGTGCATCGATTGGTTGGGGAAGTTCATCATTTATGGACAAAAACAGCTGGAAGAAGCCATTCCTCCGGAGGTGCACCTGTTTACAAGGAACACCAAAGTTGAAGCAAACCTCCTTTTGACGTGCCTGGCCACAGGTTTCTTACCAAAAGAAATCACCCTGCGCATGAAAAGGAACGGCCGTGTTCTAACTCCAGCTGACGGAGTTGTGACCTCCGGCGTTCGACCCAATGGTGACGAGACCTTCCAGAGACGAGACAGCGTGGAGATTTTACGGAGTGACTTGTCTACCTACACCTGTGAAGTGATCCATCAGGCATCCAAAGTACATGTTGAGGAGGAGTGGGaTCATAAAGTTCCTGAGGCCTCTGGAGGAATCATTGGTGGGGCGATTGGAACCGTGATCGGGATCCTTGTCACGGTCGGGGTGGTACTGGTTATCTTGTATCTAAAAGGAATAATTGgcaatAACGGGCGGTAACAATGGCGCAGTCATGTACCTAACTGTCCTCCAGGGTGAgtgttttcctctcttttccatAAATctgacagctgatggccgaTGCTTCTTTCAGACAGTCACCATGAATCCTCTTGGCTTCCCGGGTGCTTGCAGGGGACGGGAGCTACTTTAGGTCTGCACCCTCAACATTACTGGGGGCTAAGTTATGTGGAACGATGTGACAGTTATCGAGGCATAGTAtcgctttttcttttaaagccaacccccc
>XR_005641193.1
aagcagcagcagctgtttttTTGTGGCCCGACACAGAGCACAAAAACATGGTCCAACCGGCAGATAAAACTACGTTTTCAAAGCGAGAGAAGAGTCTGGTTCcgtgaaaatgtatttcttcGCAGTGTTTGTCCTTTTGGGGACAGGACTGGCGGTAAACGGCGAGATTCATTCCCTCACTTACATCTCCAAACCTGTCGGACTCCCGGGCATCCACGAGTTCACAGCCATGGGTCTGCTGGACGGCAGGATGATCGACTACTTTGACAGCGACAACCAGAAGAAAGTTCCCAAACAGGCCTGGATGAAAGAGCGACTGTCTGAAGATTACTGGGACAAAGGCACCCAGTCCCGCCAGAGCAAGCAGCAGTGGTTCAAAGTCAACATCAACATCCTGAAGGAACGAATGAGACAGAATGACACGGACCTCCATATTCTCCAGTGGATCGTCAGCTGCGAAGGCGAAATGAAGGACGGAAAGATGAAGTTCATACGTGGCATTAACATGTACGGCTACGATGGAAACGACTTCCTGTCATTTGATGAAGTCAACGGCGTCTGGGTTGCCCCAACTGACGCGGCAGTCCAGACCAAGACAAAGTGGGACGAAGTCCTAAAAGAATCCACCAAAGGCTACCTGGAGAACGAGTGCATCGATTGGTTGGGGAAGTTCATCATTTATGGACAAAAACAGCTGGAAGAAGCCATTCCTCCGGAGGTGCACCTGTTTACAAGGAACACCAAAGTTGAAGCAAACCTCCTTTTGACGTGCCTGGCCACAGGTTTCTTACCAAAAGAAATCACCCTGCGCATGAAAAGGAACGGCCGTGTTCTAACTCCAGCTGACGGAGTTGTGACCTCCGGCGTTCGACCCAATGGTGACGAGACCTTCCAGAGACGAGACAGCGTGGAGATTTTACGGAGTGACTTGTCTACCTACACCTGTGAAGTGATCCATCAGGCATCCAAAGTACATGTTGAGGAGGAGTGGGaTCATAAAGTTCCTGAGGCCTCTGGAGGAATCATTGGTGGGGCGATTGGAACCGTGATCGGGATCCTTGTCACGGTCGGGGTGGTACTGGTTATCTTGTATCTAAAAGGAATAATTGgcaatAACGGGCGGTAACAATGGCGCAGTCATGTACCTAACTGTCCTCCAGGGAGCTCGCAGAGGCAGCCAAGGATCTCTCAACAGCGCTTCCACTGGCAGTTCCAGTGGTGGTTCTAgATCAGTTGAATCTCTCAACAGCAATCGGAGTCATAACACTGACCTTAACTTCTAACACCAGCACCATCGACCAGCTGTAGCTCTCTCTGCTCACCGTCCCTGCTCAGCTCCCCTCCATCGAGTCCGGCCGCCAGCCAGTCTCTTCACCACGGCGGGAGGAGGACAAACTGCGGAGATTACTAACAGTTTGGACAGTCTTGTTTCTTCACGTTTTTATCTGTTTCTACTGGTTGAAAAAGATTGGATTCGGACTTAAGCTGCATCGTATCAGAGCTAAGGTAAACACTGATAAGCTAGCGCCAGCTCCATGGTTACTTCCATTCCTCCTGGCGAGTCCCCACTTCCCTGCAAAATGTCCTCGTTATTTAGGAATgcaaacaaagatgttgctgacctTAAGGAAGATGTTCGTCGGCTTTCCGAGGACTTAAAGGCCAAAGACGCCTTGTTAACCGCCTGCCTGGACGTGGCTCATGAACCGTTGCTCCGGATCTCAACCCTCTCAGCGGCCCTCCAGGATCCAGCGCCTAGGGATCCATCTGCCTGCCAGCGTCCATCAAGGCGTCCTGGACTGAGGTGGTTTGCGGCCAAAAGTAAGTtgtatcagccaatcagaatgtcTGTAGCTCTTCCTGTTGCAGGAAGAATGGCAGTGCATGAGATAGGAGAAAGACGTTACTGAGCCAGTGAGCGAAACAAAAGTAGCAAACAGTGTTTTAAGCtctcatattttattttcttaagtGTTTTATGTTACATTCTGTCTACACAGGTAGACTGGTTTATTTTGCCGTTATTTAGCAAGTTTAGCAAAAGTTAGAAGTGTGAATGTTCGAATGCTTGAAGCCATGTTAAGGGGTTTTTACactagacgcatccaaggtggcgcgtgacatcgtgacgtcaaaattaCGTAACATCCGGCCGACGCGTCCAATTTATGGCGCGCTAGCCGAGGTCGCGCACGGCTCTTTTCTTTTCAGCGGTgcacgacaaagcggaaacaggaggcctgaacgAGTTTGCCGACAACCGGATgacaggactctcagagtgactgcaggtctctctggtaaacttactgggttaagatgagttcttttatggtgaatgaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039819805.1 False 1376 mRNA 0.50 6 32538277 32557399
XR_005641193.1 True 2345 transcript 0.50 10 32538277 32566162

Neighbor

gene id symbol gene type direction distance location
LOC120571114 NA coding upstream 2600 32454197 ~ 32535677 (+)
LOC120571110 NA coding upstream 8395 32516456 ~ 32529882 (+)
LOC120571111 NA coding upstream 25651 32483050 ~ 32512626 (+)
LOC120571113 NA coding upstream 86758 32430414 ~ 32451519 (+)
LOC120570933 NA coding upstream 112179 32423212 ~ 32426098 (+)
LOC120571112 NA coding downstream 7638 32573800 ~ 32587442 (+)
LOC120571107 LOC100707240,LOC102312923,LOC102203509,LOC101472130 coding downstream 144679 32710841 ~ 32731554 (+)
LOC120570938 NA coding downstream 178427 32744589 ~ 32761985 (+)
LOC120572046 NA coding downstream 590659 33156821 ~ 33160537 (+)
LOC120572051 NA coding downstream 625219 33191381 ~ 33195543 (+)
G138068 NA non-coding upstream 131254 32406664 ~ 32407023 (+)
G137981 NA non-coding upstream 254384 32282111 ~ 32283893 (+)
G137983 NA non-coding upstream 256299 32281455 ~ 32281978 (+)
G137970 NA non-coding upstream 392786 32144610 ~ 32145491 (+)
G137956 NA non-coding upstream 409918 32107861 ~ 32128359 (+)
G138111 NA non-coding downstream 140680 32706842 ~ 32707949 (+)
G138116 NA non-coding downstream 149828 32715990 ~ 32718124 (+)
G138117 NA non-coding downstream 166648 32732810 ~ 32740022 (+)
G138118 NA non-coding downstream 172083 32738245 ~ 32857673 (+)
LOC120571116 NA non-coding downstream 225665 32791827 ~ 32853611 (+)
G138076 NA other upstream 33301 32430410 ~ 32504976 (+)
LOC120571558 NA other upstream 534597 31995001 ~ 32003680 (+)
LOC120570800 NA other upstream 854825 31617595 ~ 31683452 (+)
G137773 NA other upstream 1601420 30921166 ~ 30936857 (+)
G137743 NA other upstream 1791269 30745785 ~ 30747008 (+)
G138105 NA other downstream 75479 32641641 ~ 32699309 (+)
G138130 NA other downstream 417600 32983762 ~ 33020409 (+)
LOC120572048 NA other downstream 596214 33162376 ~ 33200180 (+)
G138177 NA other downstream 596254 33162416 ~ 33195323 (+)
LOC120570940 NA other downstream 952603 33518765 ~ 33519270 (+)

Expression


Co-expression Network