LOC120572048


Basic Information

Item Value
gene id LOC120572048
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 33162376 ~ 33200180 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821250.1
GTGATATCACTAAATTAATATATACTGTACCAAAGTTTTCCAGCAGCATAGTGACCAATCTCCACAGCGCGGTAAGCAGTAAGTGAAGTGAAGCTACGGTTGGATTGTCTCAAGATGTCCGAAGATATTTATGCCAAACCAGATATGTCAAATAAGGTGAGATACAACAGAAATGTACAGAAGGACAATGAATGGGAGGAAAGGGAGGTGGAAATATACGACGATATCGGAGATGATCAAACTGCTAATCAGTCACACGGAGGAGGACCAGACACTGAGAGGAATCCTCCAGCCGTCCAAAGGAAGACTCTCAGGGCTGCAGCACTCTGTCTGGCAGTGCTCTGCTTTCTGATGATGACTGGAATCATCTTATCCGCATACTTATCCGTCAACATGAGTCAGTTAAAGGAAGAAGTAAAGCAGCTGAAGAACAGAACTGAAGAGAAGCGGTGTCCTGATGGATGGACGATATTAAAAAGCAGTTGTTACTTCAAAACTAATGGGTTGAACACTTGGTCTGGAAGCAGAGCTGACTGTCGGCAGAGAGGAGCAGATCTGGTCGTTATAAATGATGAAGAGGAATGgGAGTTTGTCTCTGAGCTGAGTAAGGATAAAGAGTCCTGGATTGGTCTACGGAATATAAACACAGGACAGGGACGGGGATGGGAATGGGTGGACGGATCACCGCTGACAGAAACGTTCTGGGCAAAAGGACTAACTCAAAATAACGGTTACTATGCTGCATGCTGCAATCAAGAAGGACAATTGACACAAACATATTCTTCTTATAATAAGAACTGGATCTGTGAGAAAAAGATTATCTGAACTCTTTGATGACAGAGAGGTGTGTAGTGTTGGGATCAGCTTTGTTAAATCAGAccaatatatatttaacatttagTCAGTTGTTATTCTGTGTTACTAAATAACCTGGATTACAGAGATATTGTTCCTCTGCCCTTCATAGTGCACAATCTGGTTAGAAGTCATGTGTACTTACTCTGTAGTCCTACaggattattataataaaagataataaaaacatGGATTAGCAGGTTGTCTTTACCTTGGTTCATGTAGTTgatcttgtatttgtatcttattctattttaacctgtttttatattctatCTCTTTCATGacagtttttaattgctctttattGTTTGATGTAAAGCGTTTTGAATTgtcttgttgctgaaatgtgctatagaaataaagatgCCTCTCCCtacaa
>XM_039821251.1
GTGATATCACTAAATTAATATATACTGTACCAAAGTTTTCCAGCAGCATAGTGACCAATCTCCACAGCGCGGTAAGCAGTAAGTGAAGTGAAGCTACGGTTGGATTGTCTCAAGATGTCCGAAGATATTTATGCCAAACCAGATATGTCAAATAAGGTGAGATACAACAGAAATGTACAGAAGGACAATGAATGGGAGGAAAGGGAGGTGGAAATATACGACGATATCGGAGATGATCAAACTGCTAATCAGTCACACGGAGGAGGACCAGACACTGAGAGGAATCCTCCAGCCGTCCAAAGGAAGACTCTCAGGGCTGCAGCACTCTGTCTGGCAGTGCTCTGCTTTCTGATGATGACTGGAATCATCTTATCCGCATACTTATCCGTCAACATGAGTCAGTTAAAGGAAGAAGTAAAGCAGCTGAAGAACAGAACTGAAGAGAAGCGGTGTCCTGATGGATGGACGATATTAAAAAGCAGTTGTTACTTCAAAACTAATGGGTTGAACACTTGGTCTGGAAGCAGAGCTGACTGTCGGCAGAGAGGAGCAGATCTGGTCGTTATAAATGATGAAGAGGAATGgGAGTTTGTCTCTGAGCTGAGTAAGGATAAAGAGTCCTGGATTGGTCTACGGAATATAAACACAGGACAGGGACGGGGATGGGAATGGGTGGACGGATCACCGCTGACAGAAACGTTCTGGGCAGCAGGACTAACTCAAAATAACGGTTACTATGCTGCATGCTGCAATCAACAAGGAAAATGGACACAAGGATATAATTATATGAATAAGAACTGGATGTGTGAGAAAAAGATCTGAACTCTTTGATGATAGAGAGGTGTGTAGTGTTGGGATCAGCTTTGTCAAATCAGACCaatatacatttaacatttaCTCAGCCGTTTATTCTGTGTTGCTAAATAATCTGGATTACAGAGATATTGTTCCTCTGCCCTTCATAGTGCACAATCTGGTTAGAAGTCATGTGTACTTACTCTGTAGTCCTACAGGATTATTATCATTAAAGATGATAAAAACATGGATTAGCAGGTTGTCTGTACTTTGGTTTACGAAGTGGATTAATATGTTTGTGTTCAGTTAGATAAAAGTTGTTCCTGTGTCCTTTGATAAACCTGTAGTCAGCTGCTAATTTCCAGCTGCCAGTGAGAAGCTTCACCAGGAGAGTTAAACATGCATTGAGATTAATGTTACGCCTCTTgagcctgtgtgtctgtccaacTTCAACACAAGGGACATTGGAAGTTTTactcttgtatttgtatcttattctattaaagtttttaactgctctttaacatttgatgtaaagcattttgtattgccttgttgctgaaatgtgatATAGAAATAAAGATGCCTTGCCCtacaa
>XM_039821253.1
GTGATATCACTAAATTAATATATACTGTACCAAAGTTTTCCAGCAGCATAGTGACCAATCTCCACAGCGCGGTAAGCAGTAAGTGAAGTGAAGCTACGGTTGGATTGTCTCAAGATGTCCGAAGATATTTATGCCAAACCAGATATGTCAAATAAGGTGAGATACAACAGAAATGTACAGAAGGACAATGAATGGGAGGAAAGGGAGGTGGAAATATACGACGATATCGGAGATGATCAAACTGCTAATCAGTCACACGGAGGAGGACCAGACACTGAGAGGAATCCTCCAGCCGTCCAAAGGAAGACTCTCAGGGCTGCAGCACTCTGTCTGGCAGTGCTCTGCTTTCTGATGATGACTGGAATCATCTTATCCGCATACTTATCCGTCAACATGAGTCAGTTAAAGGAAGAAGTAAAGCAGCTGAAGAACAGAACTGAAGAGAAGCGGTGTCCTGATGGATGGACGATATTAAAAAGCAGTTGTTACTTCAAAACTAATGGGTTGAACACTTGGTCTGGAAGCAGAGCTGACTGTCGGCAGAGAGGAGCAGATCTGGTCGTTATAAATGATGAAGAGGAATGgGAGTTTGTCTCTGAGCTGAGTAAGGATAAAGAGTCCTGGATTGGTCTACGGAATATAAACACAGGACAGGGACGGGGATGGGAATGGGTGGACGGATCACCGCTGACAGAAACGTTCTGGGCAGCAGGACTGCCTCGCTATAACGGTTACTATGCAACATGCTGCATTCAACAAAGAAAATGGATGCCAGGACATACTGATAAAAAGAATGGGATATGTGAGAAAAAGATCTGAATTCTTTGATGACAGAGAGGTGTGTAGCGTTGGAATCAGCTTTGTCAAATCAGACACATTCTTTAACATTTACTCAGCTGTTTATTCTGTGTTGCTAAATAACCTGGATTACAGAGATATTGTTCCTCTGCCCTTCATAGTGCACAATCTGGTTAGAAGTCATGTGTACTTACTCTGTAGTCCTACAGGATTATTATCATTAAAGCTAATAAAAACATGGA
>XM_039821254.1
GTGATATCACTAAATTAATATATACTGTACCAAAGTTTTCCAGCAGCATAGTGACCAATCTCCACAGCGCGGTAAGCAGTAAGTGAAGTGAAGCTACGGTTGGATTGTCTCAAGATGTCCGAAGATATTTATGCCAAACCAGATATGTCAAATAAGGTGAGATACAACAGAAATGTACAGAAGGACAATGAATGGGAGGAAAGGGAGGTGGAAATATACGACGATATCGGAGATGATCAAACTGCTAATCAGTCACACGGAGGAGGACCAGACACTGAGAGGAATCCTCCAGCCGTCCAAAGGAAGACTCTCAGGGCTGCAGCACTCTGTCTGGCAGTGCTCTGCTTTCTGATGATGACTGGAATCATCTTATCCGCATACTTATCCGTCAACATGAGTCAGTTAAAGGAAGAAGTAAAGCAGCTGAAGAACAGAACTGAAGAGATTTCTGTCAACAGTCAGTTAGAGAGCAGCTACCAAACACTGAGTAAAAACAACAGTCAGCTACAGGATGAAGTAAAGAAGCTGAAGAAGAGAATTAAAGATGAGAAAAgcttaaaaacagaaaactccTGTATTTTACCAATTAACATTATATGGCTTGACTGTGTCTGTTTAATGCTGATGAACTTGAAATATTTCAGAGACAGTCACTTGAGATATAAAAACCTGAGAGAAACTATTTACAAATTATTTACAGAATAAACATGAAAGGGAAACGTGGCAGAGGCAGGAAAGATCTTTAATTAAACT
>XR_005641346.1
GTGATATCACTAAATTAATATATACTGTACCAAAGTTTTCCAGCAGCATAGTGACCAATCTCCACAGCGCGGTAAGCAGTAAGTGAAGTGAAGCTACGGTTGGATTGTCTCAAGATGTCCGAAGATATTTATGCCAAACCAGATATGTCAAATAAGGTGAGATACAACAGAAATGTACAGAAGGACAATGAATGGGAGGAAAGGGAGGTGGAAATATACGACGATATCGGAGATGATCAAACTGCTAATCAGTCACACGGAGGAGGACCAGACACTGAGAGGAATCCTCCAGCCGTCCAAAGGAAGACTCTCAGGGCTGCAGCACTCTGTCTGGCAGTGCTCTGCTTTCTGATGATGACTGGAATCATCTTATCCGCATACTAAGTATCCGTCAACATGAGTCAGTTAAAGGAAGAAGTAAAGCAGCTGAAGAACAGAACTGAAGAGAAGCGGTGTCCTGATGGATGGACGATATTAAAAAGCAGTTGTTACTTCAAAACTAATGGGTTGAACACTTGGTCTGGAAGCAGAGCTGACTGTCGGCAGAGAGGAGCAGATCTGGTCGTTATAAATGATGAAGAGGAATGgGAGTTTGTCTCTGAGCTGAGTAAGGATAAAGAGTCCTGGATTGGTCTACGGAATATAAACACAGGACAGGGACGGGGATGGGAATGGGTGGACGGATCACCGCTGACAGAAACGTTCTGGGCAAAAGGACTAACTCAAAATAACGGTTACTATGCTGCATGCTGCAATCAAGAAGGACAATTGACACAAACATATTCTTCTTATAATAAGAACTGGATCTGTGAGAAAAAGATTATCTGAACTCTTTGATGACAGAGAGGTGTGTAGTGTTGGGATCAGCTTTGTTAAATCAGAccaatatatatttaacatttagTCAGTTGTTATTCTGTGTTACTAAATAACCTGGATTACAGAGATATTGTTCCTCTGCCCTTCATAGTGCACAATCTGGTTAGAAGTCATGTGTACTTACTCTGTAGTCCTACaggattattataataaaagataataaaaacatGGATTAGCAGGTTGTCTTTACCTTGGTTCATGTAGTTgatcttgtatttgtatcttattctattttaacctgtttttatattctatCTCTTTCATGacagtttttaattgctctttattGTTTGATGTAAAGCGTTTTGAATTgtcttgttgctgaaatgtgctatagaaataaagatgCCTCTCCCtacaa

Function

GO: NA

KEGG:

id description
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821250.1 False 1237 mRNA 0.40 6 33162376 33177268
XM_039821251.1 True 1393 mRNA 0.41 6 33162376 33200180
XM_039821253.1 False 1040 mRNA 0.43 6 33162376 33183468
XM_039821254.1 False 753 mRNA 0.40 4 33162376 33167357
XR_005641346.1 False 1240 transcript 0.40 6 33162376 33177268

Neighbor

gene id symbol gene type direction distance location
LOC120572046 NA coding upstream 1839 33156821 ~ 33160537 (+)
LOC120570938 NA coding upstream 400391 32744589 ~ 32761985 (+)
LOC120571107 LOC100707240,LOC102312923,LOC102203509,LOC101472130 coding upstream 430822 32710841 ~ 32731554 (+)
LOC120571112 NA coding upstream 574934 32573800 ~ 32587442 (+)
LOC120571110 NA coding upstream 632494 32516456 ~ 32529882 (+)
LOC120570944 NA coding downstream 481427 33681607 ~ 33688186 (+)
LOC120572064 NA coding downstream 506897 33707077 ~ 33707676 (+)
LOC120572074 NA coding downstream 510679 33710859 ~ 33712367 (+)
LOC120570946 NA coding downstream 515314 33715494 ~ 33716008 (+)
LOC120572062 NA coding downstream 522219 33722399 ~ 33722906 (+)
G138174 NA non-coding upstream 17762 33143394 ~ 33144614 (+)
G138167 NA non-coding upstream 73928 33087859 ~ 33088448 (+)
G138133 NA non-coding upstream 95560 33011581 ~ 33066816 (+)
G138135 NA non-coding upstream 174636 32834870 ~ 32987740 (+)
G138141 NA non-coding upstream 191452 32861736 ~ 32970924 (+)
G138303 NA non-coding downstream 208566 33408746 ~ 33417971 (+)
G138324 NA non-coding downstream 332074 33532254 ~ 33562356 (+)
G138323 NA non-coding downstream 400327 33600507 ~ 33746312 (+)
LOC120572060 NA non-coding downstream 541039 33741219 ~ 33741724 (+)
LOC120572056 NA non-coding downstream 543986 33744166 ~ 33744877 (+)
G138130 NA other upstream 141967 32983762 ~ 33020409 (+)
G138105 NA other upstream 463067 32641641 ~ 32699309 (+)
LOC120571115 NA other upstream 596214 32538277 ~ 32566162 (+)
G138076 NA other upstream 657400 32430410 ~ 32504976 (+)
LOC120571558 NA other upstream 1158696 31995001 ~ 32003680 (+)
LOC120570940 NA other downstream 318585 33518765 ~ 33519270 (+)
LOC120572068 NA other downstream 330625 33530805 ~ 33531621 (+)
LOC120572063 NA other downstream 334477 33534657 ~ 33535271 (+)
G138322 NA other downstream 338935 33539115 ~ 33998689 (+)
LOC120572072 NA other downstream 343288 33543468 ~ 33544242 (+)

Expression


Co-expression Network