LOC120571887


Basic Information

Item Value
gene id LOC120571887
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 30067195 ~ 30069038 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039820998.1
AAAAAGGGCCACTGACTTTGCAGCAGTCATTAAGCTGAAACAACAGTTTCAGATTTTGTTGGTTCACTGCTAGCACGTCTTGCAGGCTGTTGGGCTTTGTCTATAACACAGAAATGTCCTCTGGGTTCTGTGTGAGAGTGCTTGTGCTTTCACTTGTGACTTTTGGGCAGCAAGCAAAGGCTCTCAGCTACAGAAGTGGAGGCTTCAACGACGTTACACCTCACTTTGATTTTCAAAGAAGATTCAACCCTGCTTCATCTGAGAACTTGGAGCCAGCGGCTGCACCGAGTGCAGCAGGTTCTAGTGGTTCTTACGGTTGGCAAATGGATGGCTACAGTCAAGAGGGAAGTGTTTCTAGTTACGGGCCTGGCCATCCAGTCCTTCAAGAACCCAGACAAAACCCCCAGCAGCCACCTCAAACTAACCCTAATACAGGATTCCTTTCAAGTAATGGCATTAAGATGGATTCTATTCCCCAACATGAGTCCACTTGGTGGTCCAGAACCCAGCAGCACGCTTACCCAGCTAAACTCCAGAAACTAGGATACCCAGCCAGGTCCCAGCAGCACACTGGCCCAGCCGGGTCCCAGCAGAACGCCTACATAGACTATCCTTCCAATCCCGTGGAGCCCTCTCGCCCATCCAATCCCGTGGAGCCCTCTCGCCCATCCAAGCCCAAGCGGCCTTCTCACCCATTGAAGTCTCAGAAACCAGGCTACCTATCCAAGCCCCAGTCCACTTGGTGGTCCAAAACCCAGCAGCATGCTTACCCAGCTAAACTCCAGAAACTAGGATACCCAGCCAGGTCCCAGCAGCACACCGGCCCAGCCGGGTCCCAGCAGCACGCCTACCTGGGCTATCCTTCCAAGCCCCTGCAGTCTGCTGTCCCAGTCAGGCCCCAGCAGCCCACCAAGCTCCAGAAAGGGGTGACTCAAACCAAAGTTGGCATGTGGGACCTTTTTGGTGGAGGTATTTTTGATTCCAAGCCCACGGATACAAAACTTCAAAATATTGCATCAAGTTATGAAATTATGAGGGACTCCACTTGGCAAGCTAAGCACCAGCAGCCCATCTACCTGACCAAGCACCAGCCACAATCTATTATTGCTTCAAGTCACGCAATTGAGATGCATTCTGGTCCCCAGTCTCAGTCCACTAAATCCCAGCAACCCGCCTACCTGACCAAGCACCAGCCACATTCTGTTATTGCTTCAAGTCATGCAATTGAGATGCATTCTGGTCCCCAGTCTCAGTCCACTAAATCCCAGCAGCCCGCCTACCAGACAAAGTCTCAGCAAAAAATCACCCAACACAAAGCTGGCATAATGTCAGATTTTACTCCTCTTCAGGGAGGTGGTATTTTTGTCTTTGAGCCCACTCACTCAAACCCACAAGTACTTCTTCATCCTAGAAGTTCAAGACCAATTCCAATGGCATCATCGGACCATCCCAGGTGGCAGCAGCAACAGGTGCCAGTGTCCAACAGACATGGTTGACCTTTCATGTTCCTGACCTTTCTGAAAGCAGTCTGCTCTTGCATAAACTGTTTTTGAGACCTTCAATAAAATACTTGGAACTGCA
>XM_039821001.1
AAAAAGGGCCACTGACTTTGCAGCAGTCATTAAGCTGAAACAACAGTTTCAGATTTTGTTGGTTCACTGCTAGCACGTCTTGCAGGCTGTTGGGCTTTGTCTATAACACAGAAATGTCCTCTGGGTTCTGTGTGAGAGTGCTTGTGCTTTCACTTGTGACTTTTGGGCAGCAAGCAAAGGCTCTCAGCTACAGAAGTGGAGGCTTCAACGACGTTACACCTCACTTTGATTTTCAAAGAAGATTCAACCCTGCTTCATCTGAGAACTTGGAGCCAGCGGCTGCACCGAGTGCAGCAGGTTCTAGTGGTTCTTACGGTTGGCAAATGGATGGCTACAGTCAAGAGGGAAGTGTTTCTAGTTACGGGCCTGGCCATCCAGTCCTTCAAGAACCCAGACAAAACCCCCAGCAGCCACCTCAAACTAACCCTAATACAGGATTCCTTTCAAGTAATGGCATTAAGATGGATTCTATTCCCCAACATGAGTCCACTTGGTGGTCCAGAACCCAGCAGCACGCTTACCCAGCTAAACTCCAGAAACTAGGATACCCAGCCAGGTCCCAGCAGCACACCGGCCCAGCCGGGTCCCAGCAGCACGCCTACCTGGGCTATCCTTCCAAGCCCCTGCAGTCTGCTGTCCCAGTCAGGCCCCAGCAGCCCACCAAGCTCCAGAAAGGGGTGACTCAAACCAAAGTTGGCATGTGGGACCTTTTTGGTGGAGGTATTTTTGATTCCAAGCCCACGGATACAAAACTTCAAAATATTGCATCAAGTTATGAAATTATGAGGGACTCCACTTGGCAAGCTAAGCACCAGCAGCCCATCTACCTGACCAAGCACCAGCCACAATCTATTATTGCTTCAAGTCACGCAATTGAGATGCATTCTGGTCCCCAGTCTCAGTCCACTAAATCCCAGCAACCCGCCTACCTGACCAAGCACCAGCCACATTCTGTTATTGCTTCAAGTCATGCAATTGAGATGCATTCTGGTCCCCAGTCTCAGTCCACTAAATCCCAGCAGCCCGCCTACCAGACAAAGTCTCAGCAAAAAATCACCCAACACAAAGCTGGCATAATGTCAGATTTTACTCCTCTTCAGGGAGGTGGTATTTTTGTCTTTGAGCCCACTCACTCAAACCCACAAGTACTTCTTCATCCTAGAAGTTCAAGACCAATTCCAATGGCATCATCGGACCATCCCAGGTGGCAGCAGCAACAGGTGCCAGTGTCCAACAGACATGGTTGACCTTTCATGTTCCTGACCTTTCTGAAAGCAGTCTGCTCTTGCATAAACTGTTTTTGAGACCTTCAATAAAATACTTGGAACTGCA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039820998.1 True 1581 mRNA 0.50 4 30067195 30069038
XM_039821001.1 False 1332 mRNA 0.49 5 30067195 30069038

Neighbor

gene id symbol gene type direction distance location
LOC120570844 LOC102290737,LOC100707037,LOC101469711,LOC103146442 coding upstream 84415 29933415 ~ 29982780 (+)
LOC120570845 NA coding upstream 154713 29888873 ~ 29912482 (+)
LOC120571183 LOC103370324,LOC102309436,LOC102214173 coding upstream 234834 29818666 ~ 29832361 (+)
LOC120570814 cacng8,LOC108242680,LOC106519608,LOC104958027,LOC101473306,LOC100708375 coding upstream 311288 29732913 ~ 29755907 (+)
cacng7a LOC100708651,LOC101075242,LOC101474381,LOC101173155,LOC103370323 coding upstream 347860 29670607 ~ 29719335 (+)
LOC120571888 LOC107086110,LOC104936375,LOC103356842,LOC104962367 coding downstream 8537 30077575 ~ 30089918 (+)
iffo1a NA coding downstream 22736 30091774 ~ 30129944 (+)
LOC120570896 LOC103146447,LOC105934086,LOC107086112,LOC104962365,LOC106519597 coding downstream 64182 30133220 ~ 30143546 (+)
LOC120570853 LOC103356836 coding downstream 175093 30244131 ~ 30266694 (+)
LOC120570731 LOC103376259 coding downstream 467314 30536352 ~ 30548827 (+)
LOC120570850 NA non-coding upstream 27583 29995188 ~ 30039612 (+)
LOC120570849 NA non-coding upstream 138682 29913995 ~ 29928513 (+)
G137527 NA non-coding upstream 144858 29921568 ~ 29922337 (+)
G137526 NA non-coding upstream 150274 29916717 ~ 29916921 (+)
G137485 NA non-coding upstream 270703 29795932 ~ 29796492 (+)
G137547 NA non-coding downstream 63917 30132955 ~ 30190325 (+)
G137548 NA non-coding downstream 77737 30146775 ~ 30147995 (+)
G137579 NA non-coding downstream 200005 30269043 ~ 30270380 (+)
G137584 ol-gb,LOC101069099,LOC104946927,LOC103356834 non-coding downstream 215162 30284200 ~ 30294784 (+)
G137645 NA non-coding downstream 231039 30300077 ~ 30300406 (+)
LOC120571186 LOC104962270,LOC108242670,LOC106519599,LOC101074355,LOC102221922 other upstream 180049 29857641 ~ 29887146 (+)
LOC120571185 LOC105025867,LOC101068015,LOC100697091,LOC104962269 other upstream 211725 29849803 ~ 29855470 (+)
LOC120571184 LOC104962268 other upstream 218985 29833443 ~ 29848210 (+)
LOC120570925 LOC102307141,LOC101475123,LOC103366049,LOC102237376,LOC103146430,LOC107394395,LOC108242668,LOC102779594 other upstream 866170 29163007 ~ 29201025 (+)
LOC120571364 LOC100710000,LOC101476588,LOC102306017,LOC102215018,LOC103366045 other upstream 1005834 29020235 ~ 29061361 (+)
G137551 NA other downstream 82581 30151619 ~ 30155115 (+)
LOC120570927 NA other downstream 447520 30516558 ~ 30517890 (+)
rnf139 rnf139,LOC106674496 other downstream 502425 30571463 ~ 30658439 (+)
G137743 NA other downstream 676747 30745785 ~ 30747008 (+)
G137773 NA other downstream 852128 30921166 ~ 30936857 (+)

Expression


Co-expression Network