G148557


Basic Information

Item Value
gene id G148557
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 33277761 ~ 33279405 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU200867
aatctacaatgtaaatagtcatgaaaataaatatatataatatatatatatgtaggtggcggtgtaaacGAGGAGCTGAAGCCCacgtcagccaatcagaatcccgacaacagcaaccaatcacgtcctgtctctttctctctctcggctgccctaaacaaacaaagatttccaaaaatctccactttgcccggagtttttagaaataatcgtttttctgtgattaaaaacacagaaaacgaGAGGCCACACCGCGGGAAAATATGTGTGCCTTCCCCTCGTGTAAACGGGGGCCTAAAACTACCGCTGACAGTTTGTAACGTTGAAATAAAATAGATTCTGGAtcgttttattattatttcgaCAGTTTGCAGCTGACTCGACCAGCTggcttctctattggctgttgaaaacATGTGACCTGTCTTACGGGCTAAAACCTATCCTGCTAACGCGCTAAAGCGTCTCCTCCCAGCGACAGCAGAAGTCCTTCCCTGTTGGTCTCGTCTCCGTGTGTCTCTGACCTCGTGTGGACGAGTTGCCCAACGAGTTGCCCAACGAGTTGCCCAACGAGTTGCCCGGTGCAGCCGCCACGCTAACGTCTAACGGACATCCAGAACATTCCAAGTTAcgatgttgttgttattgttgttgttgttgttgttgttgctttgtgtgtgtttggttttttaAGAGTATTTTTCTACAGCTTTTTGTATGTTAGCGTATTAcacagggctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgtgtgtgtgtgatgtgactTCCTGATTTGGCTGTAACCACTTTCTgacgatgacgatgatgatgatgatgatgatgatgatgatggtgatgatgatgatgatgaagatgatgatgatgatgatgatgatgatggtgatgatgatgatgatgatgacgatgatgatgatgatgatgatgatgatggtggtgatgatgataacgatgatgatgatgatgatgatgataacgaTGATGAtaacgatgatgatgatgatgatgatgaagactgTAATTGTTGACCTGTATAGATTTAGACCGTTTCCCTAATGTTCTGTGTAAAACGTGAATATTTTGGTTTGTATCACCTTTTATCCCACCAataaaactacacacacacactctggcgcctctgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtgtgtattgtattgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgt

Function

NR:

description
PREDICTED: aquaporin-12-like

GO:

id name namespace
GO:0043292 contractile fiber cellular_component
GO:0044449 obsolete contractile fiber part cellular_component
GO:0036379 myofilament cellular_component
GO:0005861 troponin complex cellular_component
GO:0005865 striated muscle thin filament cellular_component
GO:0030016 myofibril cellular_component
GO:0030017 sarcomere cellular_component

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes
ko05410 Hypertrophic cardiomyopathy
ko05414 Dilated cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
TU200867 True 1262 lncRNA 0.43 2 33277761 33279405

Neighbor

gene id symbol gene type direction distance location
LOC120572913 LOC101063171,LOC108228415 coding downstream 5276 33271926 ~ 33272485 (-)
LOC120572895 LOC103365251,LOC100699232,LOC101156360 coding downstream 73084 33198196 ~ 33204677 (-)
trnag-ucc_11 NA coding downstream 75589 33202101 ~ 33202172 (-)
LOC120572914 NA coding downstream 85675 33186655 ~ 33192086 (-)
LOC120572926 NA coding downstream 118477 33158690 ~ 33159284 (-)
LOC120572848 NA coding upstream 220595 33500000 ~ 33502560 (-)
LOC120572824 NA coding upstream 227433 33506838 ~ 33509846 (-)
LOC120572860 LOC106676966 coding upstream 243706 33523111 ~ 33524779 (-)
LOC120572617 NA coding upstream 245854 33525259 ~ 33527936 (-)
LOC120572619 NA coding upstream 343278 33622683 ~ 33625137 (-)
G148572 NA non-coding downstream 5949 33270954 ~ 33271812 (-)
G148571 NA non-coding downstream 6947 33269406 ~ 33270814 (-)
G148558 NA non-coding downstream 16082 33175630 ~ 33261679 (-)
G148563 NA non-coding downstream 80184 33177386 ~ 33197577 (-)
LOC120573033 NA non-coding downstream 102257 33159293 ~ 33175504 (-)
G148560 NA non-coding upstream 22781 33302186 ~ 33304042 (-)
G148559 NA non-coding upstream 30812 33310217 ~ 33312620 (-)
G148577 NA non-coding upstream 62678 33342083 ~ 33347980 (-)
G148578 NA non-coding upstream 71184 33350589 ~ 33351873 (-)
G148585 NA non-coding upstream 124960 33404365 ~ 33404745 (-)
LOC120572612 NA other downstream 145086 33110199 ~ 33132675 (-)
G148509 NA other downstream 315528 32831676 ~ 32962233 (-)
G148536 NA other downstream 331955 32945345 ~ 32945806 (-)
G148472 NA other downstream 522400 32731080 ~ 32755361 (-)
G148453 NA other downstream 577356 32652556 ~ 32700405 (-)
LOC120572843 NA other upstream 216308 33495713 ~ 33498046 (-)
G148879 NA other upstream 445260 33724665 ~ 33789375 (-)
G148918 NA other upstream 741167 34020572 ~ 34021079 (-)
LOC120572826 NA other upstream 766832 34046237 ~ 34201855 (-)
LOC120572812 NA other upstream 803057 34082462 ~ 34176045 (-)

Expression


Co-expression Network