LOC120572913 (LOC101063171,LOC108228415)


Basic Information

Item Value
gene id LOC120572913
gene name LOC101063171,LOC108228415
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 33271926 ~ 33272485 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822432.1
CTCAGGTGATGGCGCCCACGCGGATGAAGCTACGAGTCCGTCGGCGCGGCAACGCGGGCGCCGGCGCCAGCGACGACGCCGGCGGCGGCGGTCAACCGGAGGAAGAAGAGCGACGGCGAGAGAGCGGCGCCCGCACCAGCCGCAGGAAAAACGCCACCAACAACACCACCAGCAGCGCCTCAGCTACTCCCGCCACCGCCACGACCACGACGTCCTCGCCTCCCCCCCAGCGGGCGCCGCCGGCGGAGGACGCGTCCCCGGACTCCAAGTGCCCGATCTGCCTGGACCGGTTCTCCAACGTGGCGTACCTGGACCGCTGCCTGCACCGGTTCTGCTTCCCGTGCGTGCAGGAGTGGTCGCGCAGCAAGCCCGAGTGCCCGCTCTGCAAGCAGCCCTTCGCCTCCATCCTGCACTCCGTGGTCGCCGCCGACGACTTCAAGGAGTACACGCTGCGCCCGCCGCCGCCGACGCACGACGACAACGGCGGCGGCAGCGTGGCCGCCACGGTCGCCATGGTAGCCGCCAGGAGGCCGGGCGGTGCCGCAGCGACCACCAGATGA

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase Topors-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822432.1 True 560 mRNA 0.72 1 33271926 33272485

Neighbor

gene id symbol gene type direction distance location
LOC120572895 LOC103365251,LOC100699232,LOC101156360 coding downstream 67249 33198196 ~ 33204677 (-)
trnag-ucc_11 NA coding downstream 69754 33202101 ~ 33202172 (-)
LOC120572914 NA coding downstream 79840 33186655 ~ 33192086 (-)
LOC120572926 NA coding downstream 112642 33158690 ~ 33159284 (-)
LOC120572772 LOC103367226,LOC104955725 coding downstream 181269 33084338 ~ 33090657 (-)
LOC120572848 NA coding upstream 227515 33500000 ~ 33502560 (-)
LOC120572824 NA coding upstream 234353 33506838 ~ 33509846 (-)
LOC120572860 LOC106676966 coding upstream 250626 33523111 ~ 33524779 (-)
LOC120572617 NA coding upstream 252774 33525259 ~ 33527936 (-)
LOC120572619 NA coding upstream 350198 33622683 ~ 33625137 (-)
G148572 NA non-coding downstream 114 33270954 ~ 33271812 (-)
G148571 NA non-coding downstream 1112 33269406 ~ 33270814 (-)
G148558 NA non-coding downstream 10247 33175630 ~ 33261679 (-)
G148563 NA non-coding downstream 74349 33177386 ~ 33197577 (-)
LOC120573033 NA non-coding downstream 96422 33159293 ~ 33175504 (-)
G148557 NA non-coding upstream 5276 33277761 ~ 33279405 (-)
G148560 NA non-coding upstream 29701 33302186 ~ 33304042 (-)
G148559 NA non-coding upstream 37732 33310217 ~ 33312620 (-)
G148577 NA non-coding upstream 69598 33342083 ~ 33347980 (-)
G148578 NA non-coding upstream 78104 33350589 ~ 33351873 (-)
LOC120572612 NA other downstream 139251 33110199 ~ 33132675 (-)
G148509 NA other downstream 309693 32831676 ~ 32962233 (-)
G148536 NA other downstream 326120 32945345 ~ 32945806 (-)
G148472 NA other downstream 516565 32731080 ~ 32755361 (-)
G148453 NA other downstream 571521 32652556 ~ 32700405 (-)
LOC120572843 NA other upstream 223228 33495713 ~ 33498046 (-)
G148879 NA other upstream 452180 33724665 ~ 33789375 (-)
G148918 NA other upstream 748087 34020572 ~ 34021079 (-)
LOC120572826 NA other upstream 773752 34046237 ~ 34201855 (-)
LOC120572812 NA other upstream 809977 34082462 ~ 34176045 (-)

Expression


Co-expression Network