G148560


Basic Information

Item Value
gene id G148560
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 33302186 ~ 33304042 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU200877
agttagttagttagatagatagatagatagatagttagttagttagttagttagttagttagGTAGTTAGTTAGGTAGTTAGTTAGATAGTTAGGCAGTTAGTTAATTAAATAGGTAGTTAATTAGATAGTTaggtagttagttagttaattagATAGTTaattagatagataggtagTTAGATAGTTAGTTAATTAGATAGGTAGTTAGTTAGTCCCCTGGTCAGCTTGCATAAGGTGCCCAATGAGTTAGTAGTTATTTAGTCTGTGGGTCAGTTAATGAGCACCCGGTctacctgtctccctctgtcctcgTGTGTcgtctacctgtctctctctgtccttgtgtgttgtctacctgtctctctctgtccttgtGTAATGAGCACCcggtctacctgtctctctctgtcctcgtGTAATGAGCACCcggtctacctgtctctctctgtcctcgtGTAATGAGCACCCGGTctacctgtctccctctgtcctcgTGTAATGAGCACCCGGTctacctgtctccctctgtcctcgTGTATTGAGCACCCGGTctacctgtctccctctgtcctcgTGTAATGAGCACCCGGTctacctgtctccctctgtcctcgTGTAATGAGCACCCGGTctacctgtctccctctgtcctcgTGTATTGAGCACCCGgt

Function

GO:

id name namespace
GO:0043292 contractile fiber cellular_component
GO:0044449 obsolete contractile fiber part cellular_component
GO:0036379 myofilament cellular_component
GO:0005861 troponin complex cellular_component
GO:0005865 striated muscle thin filament cellular_component
GO:0030016 myofibril cellular_component
GO:0030017 sarcomere cellular_component

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes
ko05410 Hypertrophic cardiomyopathy
ko05414 Dilated cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
TU200877 True 673 lncRNA 0.45 3 33302186 33304042

Neighbor

gene id symbol gene type direction distance location
LOC120572913 LOC101063171,LOC108228415 coding downstream 29701 33271926 ~ 33272485 (-)
LOC120572895 LOC103365251,LOC100699232,LOC101156360 coding downstream 97509 33198196 ~ 33204677 (-)
trnag-ucc_11 NA coding downstream 100014 33202101 ~ 33202172 (-)
LOC120572914 NA coding downstream 110100 33186655 ~ 33192086 (-)
LOC120572926 NA coding downstream 142902 33158690 ~ 33159284 (-)
LOC120572848 NA coding upstream 195958 33500000 ~ 33502560 (-)
LOC120572824 NA coding upstream 202796 33506838 ~ 33509846 (-)
LOC120572860 LOC106676966 coding upstream 219069 33523111 ~ 33524779 (-)
LOC120572617 NA coding upstream 221217 33525259 ~ 33527936 (-)
LOC120572619 NA coding upstream 318641 33622683 ~ 33625137 (-)
G148555 corin,LOC102795062 non-coding downstream 7698 33197794 ~ 33294488 (-)
G148557 NA non-coding downstream 22781 33277761 ~ 33279405 (-)
G148572 NA non-coding downstream 30374 33270954 ~ 33271812 (-)
G148571 NA non-coding downstream 31372 33269406 ~ 33270814 (-)
G148558 NA non-coding downstream 40507 33175630 ~ 33261679 (-)
G148559 NA non-coding upstream 6175 33310217 ~ 33312620 (-)
G148577 NA non-coding upstream 38041 33342083 ~ 33347980 (-)
G148578 NA non-coding upstream 46547 33350589 ~ 33351873 (-)
G148585 NA non-coding upstream 100323 33404365 ~ 33404745 (-)
G148591 NA non-coding upstream 161510 33465552 ~ 33466272 (-)
LOC120572612 NA other downstream 169511 33110199 ~ 33132675 (-)
G148509 NA other downstream 339953 32831676 ~ 32962233 (-)
G148536 NA other downstream 356380 32945345 ~ 32945806 (-)
G148472 NA other downstream 546825 32731080 ~ 32755361 (-)
G148453 NA other downstream 601781 32652556 ~ 32700405 (-)
LOC120572843 NA other upstream 191671 33495713 ~ 33498046 (-)
G148879 NA other upstream 420623 33724665 ~ 33789375 (-)
G148918 NA other upstream 716530 34020572 ~ 34021079 (-)
LOC120572826 NA other upstream 742195 34046237 ~ 34201855 (-)
LOC120572812 NA other upstream 778420 34082462 ~ 34176045 (-)

Expression


Co-expression Network