LOC120572965



Basic Information


Item Value
gene id LOC120572965
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 32803592 ~ 32809157 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XR_005641534.1
gagtctccacccagctgggtctctgtcacagGGAAACCCACCACCCCTCCGCCTCCTCCATCCCCCTCCAGCCCTGGCTCctcctccttgtctcctctgtcCTCGTCTCCTGCTCTCCTAGCGTCCTTGCTGTCTGTCCCAGTCCTCTGTGGTCTGGTGCTGCTGGTCGTTCTGGTCCTACTGGTGAGACGATGTGTCCGCAGGAAacactcaacaacaacaacaacaacaacaacaacaacagAGACTGATCCAGCTCCGGTCTACTCAGCAGTGGAAAGAACAGAAGAAGTCAGTTATGAAGAGAACAGGCGGAGAGAGAGTGATCGAGCTGCAGTGAGAGGAACTACAGACGTCAGTTATGGACAAATAGTGATCGGACCAAACAGGGCGAGAGaGTTTCCAGCAGAACCAGAAGTCGTCTACTCCTTGCTGAAGCCGACCATCCCTCCTTCACACCAGTCCAACCAGTGAAGTCTGgctgtttacatttctttaaaccaatcacagtcctccTGGGCGGCGCTGATCTCCAGACGcagtgacggtggctctgctaaatagtctcaggaaggaacttgttttggtggaacatttgcaccctgcaaaataAAACGGAACTTTTTACAGAACCacgcaggcctgccttgttgcaacATCCAAATCTACTTCTAAACTTGACTTTTTCAAGGAGTAGCttgaaggttgttgttgttctctggaaaatgtatttctgtTGATCCGGGCTAACTGCCCCTCTTCATAGACATGATTTACTTCAtgatatgttgtgtgtgtctgcctgttgtttaagtgttatttatttgaggtatttcaaaataaaaac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005641534.1 True 847 lncRNA 0.49 5 32803592 32809157

Neighbor


gene id symbol gene type direction distance location
LOC120572810 NA coding downstream 140782 32652305 ~ 32662810 (-)
LOC120572800 NA coding downstream 317239 32476726 ~ 32486353 (-)
LOC120572804 NA coding downstream 355262 32440648 ~ 32448330 (-)
LOC120572803 NA coding downstream 384013 32381753 ~ 32419579 (-)
LOC120572776 NA coding downstream 1252034 31506583 ~ 31551558 (-)
LOC120572789 NA coding upstream 176365 32985522 ~ 32995763 (-)
LOC120572766 NA coding upstream 197423 33006580 ~ 33034300 (-)
LOC120572924 NA coding upstream 240202 33049359 ~ 33055500 (-)
LOC120572785 NA coding upstream 254039 33063196 ~ 33073135 (-)
LOC120572772 LOC103367226,LOC104955725 coding upstream 275181 33084338 ~ 33090657 (-)
G148506 NA non-coding downstream 28763 32773852 ~ 32774829 (-)
G148505 NA non-coding downstream 29878 32771322 ~ 32773714 (-)
LOC120573002 NA non-coding downstream 79776 32714627 ~ 32723816 (-)
LOC120573043 NA non-coding downstream 105156 32696110 ~ 32698436 (-)
G148485 NA non-coding downstream 121525 32681068 ~ 32682067 (-)
G148520 NA non-coding upstream 18567 32827724 ~ 32831071 (-)
G148510 NA non-coding upstream 76688 32885845 ~ 32938578 (-)
G148533 kif1c,LOC106511699 non-coding upstream 125916 32935073 ~ 32939839 (-)
G148537 NA non-coding upstream 138577 32947734 ~ 32949183 (-)
G148543 NA non-coding upstream 164199 32973356 ~ 32976183 (-)
G148472 NA other downstream 48231 32731080 ~ 32755361 (-)
G148453 NA other downstream 103187 32652556 ~ 32700405 (-)
LOC120572607 NA other downstream 428043 32132336 ~ 32375549 (-)
G148246 NA other downstream 1065910 31428928 ~ 31737682 (-)
LOC120572802 NA other downstream 1129968 31277977 ~ 31673624 (-)
G148509 NA other upstream 22519 32831676 ~ 32962233 (-)
G148536 NA other upstream 136188 32945345 ~ 32945806 (-)
LOC120572612 NA other upstream 301042 33110199 ~ 33132675 (-)
corin nfxl1,corin,LOC102297304 other upstream 412578 33221735 ~ 33341537 (-)
LOC120572843 NA other upstream 686556 33495713 ~ 33498046 (-)

Expression



Co-expression Network