G154723


Basic Information

Item Value
gene id G154723
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 13774102 ~ 13775989 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU209688
TGACTCAGCCGGCTTTGAGTGTGCATGTCCCCGTGTTTGTGTGTAGCCTACATGAGGGTTGGTGCAGCAGGGCTCAAACACCCACGTCCTGCTGTGTGAACCCAGCGCCACCTGTTGCCCAGTCTGGCACAGCCCCTGCCATCCACACGTCATCTGTGGGAAAGAGCCTTTTAGGCCTCACCAAGCCTTTCTACATCTCACATACGCCCTCACACAACCAAACCACGATTGCCAGTTTTATCAGATCACAGAGACATCATATTGGCCCCATACGTGTTTTATATCATTCAACGTATACAAGATTATGAAAGCACAGCACGGAAATCAAACATCATATGGAGAAACATTATAGTAGAGTATTGGGGGTTCAGAGTGAACTGAAACAAACTGGAAAGGTTGCAGGTctgtgtcatgacaaaaaaacacaattattcaCCCAATGTGAGCTCTTCAGAAACGTTGATTTGCCAGGAAGAAACTGGAACACATGGAGGATGAGCCTGAAGACATGGGGTCCCTGCTGCTTTCGATGAAAGACAGGATTAAAATAGGATGAAGCCCCTCCATAGTTCCTTTCAAATCACTTAAATCCACAGACCAGCAGGCCAACAGTCGCATCAGCACACTGAtaagtcaatttaaaaaaatacttgttAGTATTTTATGAAAAGTAGTCGTATTTCCACATGTAATTCTAGTCACGGATTGAATCTGTCTGCCAATTGATTGATTGCTTTGGATGCAACCAGTATTAACTAAACAAGCGATTAACATTCGTTAACTGTGCGTTCTATGGTCCCTTCTCCTGTGAGTTGAGTGCCATCTGCTGGTACACTCAGTGTTGCAAGAGCTCCATTACTGACCTCGGGTTACATTTTTCCATTATTCTAGGTATTAATTGGTATTAATGCAGTACAATTAGACAacaaaaatcaaaatcaaaatataatttaaaacatggAAGTATTATTGAAccattagaaaaataaaaacctacACTCTTAAAATTGAAATATTTCTGAGAAGACCAACTGGAATTACAGTGATCCAGGCTGTAAAATCTATTTGCCACATGCCGATATCATGTAGTAAATGCATCTCATTATTCGTAAAGCCATGCCAATCCAAATTTGGTGATATTTCAGATAAATTGAAGGGTTGAATGTTCCTGTATGGGTTGAGAACATTCCTGGAGTCTCTAAAGCTAAATAAACCATTCATAAACCCACTGGATTATCTGAACACAAAAcgacaaaaactgtaaatattagACGTCACAGTCAGTAACatcaataaagaataaaaaaataaaagaaataataaacatGACTTTTTCAGTCATGCAAGTTACTGCATGGCATCAGACACTAAATAAATACAGTCACagcacatgaaaaaaaaacagattcttCACAATAATCACCTTGATTTAAGGACAAATATACACCGAGTTACCACTATATTAGGTACACCTGCTTGCCCTAAAGCAATCCAATGTAATGGTCTTGCAATTCATTTTATTGTTGTGATCTTTATGTTCTAGTTTTATTGACAGTGTCAGAGGGGTATGATTCAACTGCCGTTGcactggattattattattattattattataataatactgAGAGGTAATATTTGATTTATCTTATGAATGTAAGGAGGAGGTAAACGGAGTATAACTGGTAACTCAGTGTAATATGCTCTGTAGTCAGTCAAGCTCACAGTCCAGGACTATGGCAGGGAAATGCTCCCCTCCTTCACCCAGCAGGGAGTACATGTCTCTCAGCACACCGAAGTTGGGACATCCAGGCCCAGGTACTATAGACGAAAGATGAGGGGACAGAGTGTCCAACAGAGC

Function

GO:

id name namespace
GO:0016070 RNA metabolic process biological_process
GO:0090304 nucleic acid metabolic process biological_process
GO:0016853 isomerase activity molecular_function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function
GO:0016859 cis-trans isomerase activity molecular_function

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU209688 True 1858 lncRNA 0.40 2 13774102 13775989

Neighbor

gene id symbol gene type direction distance location
hmox2b LOC103358700,LOC108247647,LOC100705244,LOC101479559 coding downstream 9566 13757750 ~ 13764536 (-)
coro7 LOC103358706,LOC106915773 coding downstream 25500 13636809 ~ 13748602 (-)
pam16 pam16,LOC106601835,LOC103358706,LOC107695711 coding downstream 137940 13632142 ~ 13636162 (-)
srl srl coding downstream 187348 13572655 ~ 13586754 (-)
LOC120574398 adcy9 coding downstream 206303 13532771 ~ 13567799 (-)
LOC120575446 LOC104960164 coding upstream 84161 13860150 ~ 13863534 (-)
LOC120575451 rab26,LOC102798624,LOC101484267,LOC100707100 coding upstream 108348 13884337 ~ 13950756 (-)
LOC120574465 sstr2,LOC104918336,LOC102291375,LOC103373483 coding upstream 323466 14099455 ~ 14106823 (-)
LOC120575134 NA coding upstream 509185 14285174 ~ 14288819 (-)
rnf213a rnf213 coding upstream 608113 14384102 ~ 14417141 (-)
G154713 NA non-coding downstream 81631 13656018 ~ 13692471 (-)
G154601 NA non-coding downstream 519329 13254473 ~ 13254773 (-)
G154600 NA non-coding downstream 520896 13252924 ~ 13253206 (-)
LOC120574707 NA non-coding downstream 835438 12931733 ~ 12938664 (-)
G154517 NA non-coding downstream 842783 12874360 ~ 12931319 (-)
LOC120575453 NA non-coding upstream 160779 13936768 ~ 13946397 (-)
G154788 NA non-coding upstream 302525 14078514 ~ 14099281 (-)
G154791 LOC100698953,LOC106518679,LOC103373486 non-coding upstream 309753 14085742 ~ 14087766 (-)
G154825 NA non-coding upstream 549984 14325973 ~ 14326936 (-)
LOC120575037 NA non-coding upstream 554956 14330945 ~ 14337074 (-)
tfap4 tfap4 other downstream 142266 13589483 ~ 13631836 (-)
prkar1b prkar1b,LOC107661853,LOC107653458 other downstream 352151 13335449 ~ 13421951 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other downstream 761321 12973260 ~ 13012781 (-)
iqck NA other downstream 801273 12954974 ~ 12972829 (-)
LOC120575506 LOC100697827 other downstream 1036619 12735444 ~ 12737483 (-)
med9 med9 other upstream 274749 14050738 ~ 14057354 (-)
LOC120574967 mafg,LOC104918330,LOC108241257,LOC103373400,LOC101487863,LOC106533856 other upstream 678848 14454837 ~ 14471430 (-)
cenpx cenpx other upstream 750137 14526126 ~ 14529153 (-)
LOC120574989 LOC108241285,LOC103373333,LOC106518659 other upstream 757693 14533682 ~ 14543994 (-)
LOC120574213 NA other upstream 989745 14765734 ~ 14790778 (-)

Expression


Co-expression Network