LOC120574707


Basic Information

Item Value
gene id LOC120574707
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 12931733 ~ 12938664 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641887.1
cacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacctcctaaaTATAGGGTATTTTCTTAATATCACTGTCACAGGCTGGAGACTACGCACATTTTGGACTCGTGCTTCTCCAGATCCTACTAGTTCCAGTTTGCGGCACTGGTCTAACCAACAGGGGCAAGTTCAATGTTTGATCCCTTCAACATGTGGACAGAAGTCAGAAGAAGCCATGGATTGAACCACATACCCTGCTATCAATGGAGGGTCTGCTgagccacagcagcagcaacagaaccAATGACCACTTCATCCCATTCCAGGCCCTAACCTCTCGAGGTCTTGTGTTACCTCCACCCTCATGCACAATCACCCAACCAAGTGGAAGCTGCTTTCTGGGGTGGGGCAGAGTTTGAGACGGGTGGGGTGACTGCAGAGCCCTGTGTCCGTGAAGTCCTGAAGAGAGAAAAGATTGGGGACATGGATTTTTACAGGATTTACAGGATCATAGGCGTGCCTCCACTGATAGCAGAGCTCTCATTATACATAGCACGAGACTCCTTCAATCTGCCTTCCACGGTCAGACATACTGCTAACCCCCTGCGTGGATTCagacaccacacagacagataatCCCTCCTAAAGTCTGCAATTTGATGTTGCTCCCCCAGATGAACAAGACACATTAGCATGTATGTGTTATGCATACATACAAGCATtgacgcacactcacacacaaagggTGGGGAGGATTTGCGATCACAGCATGCAACTACTTTTTTGGGTTTGGGGAGAGTAAAGGATTATTGATTTAGGACACTGGCCAGATGTACCCATATGCCTGACACAGTGCAGTAAAATTCAACTATTTGCAGCAATCTTGTCCAGCAATGGCATCATTTGATTTGTGTAGACTGAAAGGTTTTACAATGAGTGCTTTCACTTCCCACTATCAGTAATGGCCTTGCTAATGTTTTTCTCCAGGGCCTTTTCATTCACGTCTAATATACTGTAAGTCCATCAATCTGTCCATACAATGACTGACTTCTTTTCTGTGTCAACATAAAAAATCCCAGGTCTCTTGCTCTGTCCCTGCTCTTCATCTACAAGCCATTTTCCATCTCTTCATCTCGTTACTTTCTCAGCCTGTCAAACACCTCTCACTCTGCCCCTTTTTCCCCTCTCCTGCTATTTTCTTTCCCCTTTTAGCATTCACATCACATCCTTGTCTCCCCATTTGGTCAGAGTTTAGGTTTGATTAAGGGAATAGAATCAAACTGATGCAGTTGCTCTTTGATATTTAAGTGATATTCTGAATCAGCAGCTCAGAGCACATGAAGTTGAGCTTCTACCTTGCTCAGTGTGTTTACTGTGCGCCTCTGTGTATATGTAAGATTGAGCATATAAATGGAGCTGGCAGGACCACAGAGCAGGACCAGACTCAGAAAGGAAGGAGCTCCACTCAAATTAATCTCCACTGGACAGCCCAGTAAAGGAGCAGAGCCATTTTTGGGAGCAAGGAGCCATCTCCTAGGTGAGTGCCATGGCAACAGCCAACGTGGGCCCCAGCTCTCAGAGCTGTCCTTTTCAAGCTTCCGATCAGAAGTGGCAGGCCAGGTTTTTTGTTATGTGGCgtctcttactctctctctctctctctctctctctctctctctctctctcttgcccaTTATTCTgcttctccttttctcttcctgCATGACACGGTCCTGGCCTTGTTCTTATACAGGAAGGCTGTGAGAAGACTGCAGAGGGAACTGTCTGTGGGAAAATGTTGCCAGACAACACAGGGGTATGTGACAGTGAGTGCAAGCAAATAAAGGGACAAAAAGGGGAAATAAGACTAGATGAGATAGATTGTCAGAGCTACATTTGAAACTATGAGAACTGCAGATTTGATGCTTTGCGCATGCTTGAAAATGTCCATGTTTTAACACGGCAGATAACAGAAATAGAAGAGCCTTTACATTTAAATCACCATCAGAATTAAATAACTTTCTCAATCTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641887.1 True 2059 lncRNA 0.46 3 12931733 12938664

Neighbor

gene id symbol gene type direction distance location
gpr139 gpr139 coding downstream 14394 12902581 ~ 12917339 (-)
LOC120574878 NA coding downstream 53519 12874376 ~ 12878214 (-)
si:ch211-139g16.8 NA coding downstream 68148 12861352 ~ 12863585 (-)
cdr2a LOC104947687 coding downstream 78002 12844396 ~ 12853731 (-)
trnal-uag_2 NA coding downstream 88759 12842893 ~ 12842974 (-)
LOC120574970 NA coding upstream 91552 13030216 ~ 13062840 (-)
LOC120574969 NA coding upstream 125589 13064253 ~ 13073926 (-)
LOC120574972 NA coding upstream 140420 13079084 ~ 13100217 (-)
LOC120574975 NA coding upstream 182197 13120861 ~ 13145929 (-)
LOC120574973 NA coding upstream 222161 13160825 ~ 13187553 (-)
G154517 NA non-coding downstream 414 12874360 ~ 12931319 (-)
G154446 LOC104918798,LOC100695608,LOC101483500,LOC105930091 non-coding downstream 150288 12779015 ~ 12781445 (-)
G154438 NA non-coding downstream 161611 12769409 ~ 12770122 (-)
G154437 LOC104947690 non-coding downstream 163130 12766698 ~ 12768603 (-)
LOC120574720 NA non-coding downstream 252623 12677493 ~ 12679110 (-)
G154600 NA non-coding upstream 314260 13252924 ~ 13253206 (-)
G154601 NA non-coding upstream 315809 13254473 ~ 13254773 (-)
G154713 NA non-coding upstream 717354 13656018 ~ 13692471 (-)
G154717 NA non-coding upstream 817000 13755664 ~ 13827791 (-)
G154723 NA non-coding upstream 835438 13774102 ~ 13775989 (-)
LOC120575506 LOC100697827 other downstream 194250 12735444 ~ 12737483 (-)
cep112 NA other downstream 366262 12427504 ~ 12565471 (-)
LOC120574419 NA other downstream 840752 12085985 ~ 12090981 (-)
G154033 NA other downstream 1706187 11203450 ~ 11225546 (-)
tnrc6c1 LOC103361861 other downstream 1794205 11098316 ~ 11137528 (-)
iqck NA other upstream 16310 12954974 ~ 12972829 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other upstream 34596 12973260 ~ 13012781 (-)
prkar1b prkar1b,LOC107661853,LOC107653458 other upstream 396785 13335449 ~ 13421951 (-)
tfap4 tfap4 other upstream 650819 13589483 ~ 13631836 (-)
med9 med9 other upstream 1112074 14050738 ~ 14057354 (-)

Expression


Co-expression Network