LOC120574970


Basic Information

Item Value
gene id LOC120574970
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 13030216 ~ 13062840 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825506.1
GTTTCGTTTCTTGGTTTGGGTTCAACAACGATTAGGAGAAAGCGGGACTCATATCGCCCGCCTGAATGCCAGAGGACCGGTCGGACCCCTGTCTTGATCTGATAACCTAGGCTGAATACACGTTACAGTTGCTGTTCTTGGTCATGGATGATTTTGTCCGTAACAAACTAAGAGAATGGGGTTTCAGCGAGTTGATAGAAAAATTTGAAGatgAAGGCATTGACACTGAAAGTCTTTACATTCTTGGGGATCAAGAAATCGCTGACTTGATCCTAAAAGTGGGACCAAGGGCAAAATTCAAGAACAAACTCAACTTGTTAAAGGAACAAAACTCAACAAATCTGGTACCAGTTAATTCTCCTGCTCAGGAACAAAACTCAACAAATCTGGTACCAGTTAATTCTCCTGCTCAGGTTTTTCCGTCCACCAGTGACACCAGTGATAAAGGGAAGAGAAAGTTGGATCTTCTGGCCGAGTCCAGCAATTGGCAATCACCGACAAGAAAACGACGATGTGACACTTACTCAGAAGAAGCCATACTCTGTGATGTGAAAGACATCATGAAGTTTGTCCAACAGAAAATACCTAACCAAGACAACAAGCTCAATAAATTCCTGAAGAAGAAAATAAGTGCTTTGGAGACAGACAAGAGGGAGTTGGTCGGTGTCTTTGGTAAAACCGGGGCTGGAAAGAGTTCTCTGATAAATGCCGTCATTGGAGTGAAGAATCTCTTGCCCTCTGGAAGTGTCAGTGCATGTACATCAGTCATGATTAAAGTCGAGGCTAACAAGGGGAAGCAAACCTATGAGGCAGACATTGAGTTTATTACAAAAGAGgagtGGAAAGATGAGCTATGGTCCTTGTTAAATTTTCTCCGGGATAATGCAGATCAGGAAAATAGTCAGGAAGAGGACGAAGATTTTCATGACACTGAGGAAAAGCTGTCAGCGCTGTATGGAGAAGAATGGAAGAACAAATCTCCTGAAAACCTCATGGATAACAAACATTTCAAAGAAATTCCAGAATTTCTATTTTCCAAGAAGAAGAGGTTGACGTGTGAATCAGCTAAAGAGCTATCTGCAAAATTTGTCAAATACACAAGAAGTGACTCAGAAGATGGAGAAGGAAAGAGGTGGTACTGGCCACTAGTGAAGTGTGTAACTATCAGGGTGCCCAATAATGATCTTCTCCGGCATGTCACACTTGTGGATCTTCCTGGAAATGGGGACCGTAACAAGAGCAGAGACAAGATGTGGAAACGGGTTGTTGGAAGTTGTTCTACTGTGTGGATTGTGACTGACATAAATcgagcagcagcagagaaagaACCCTGGGAAATCCTGAAAAGTGCCAGCAGCCTCATGGGAAATGGTGGCGAGTGTCAGCACATTCACTTTATCTGCACCAAGTCAGATGTTATTGAAGATTTGGAATCTGATGATCATTCAGCAGCTGCTGTACGTGctctcatatttaaaaaaaacatgcaagccAAGGAACAAGTGTACAAAGAATTCAGCAAACTCCCCGAGGTTAAAaaacatttcaATGAAGAATGTTTCAAAGTGTTCACAGTGAGCTCCAAAGAGTTTCTAAGAAAGAAACGTCTGGACTCAGATGACACTGAAATACCCAAACTTCGAGCATTTCTGAAAGATCTCAATGACTGTCACTCAGAAATATTGAACTATGTCTCTGGAGCTTTTGGGATTCTCTCTCTGATTCAAGGTGCCAGATGTCAAGATGGGGCTGACAAAAGAACAGATGTGTGCACAGACCTTGTAAAAAAGATGGACCATGAACTTGACGAAGTCAGAAAACCCATGGAAGAGACTTTGGAGGCTTTTCAAAAATGCCTCAGTGAGGGGGTTGAAAAGTCAAAAGGTTCATGTGAAAAAGTCTTGAAGTCGTTCTTACATCCTaGAAAGGCAAAAGGTTTTTACAAGATATTGAAGTGTGTAGTTGAGAACGGTGGCACCCACAAACCAAAAAAAGGGAAACCCATCAATCTCAATGGGAAGTTAGCTTCATGCCTGACTGACAGCATTGACGAGGAATTCAAGAAGACCTTCCCAAATGAAGGAAAATGTGGACCATTCAACGGTGCCCTCAATAAGTTTTCACTTGACACTAAGAGTCTGATTGAAAAGTACAAAGATGTCGAACTGCAGCTGATATTTCTCCAGACAGAGGTAGAAAAAGTGAAGACAAAACTCAACAAACTCATCCGGGAGCGTAAGAAAACGATCTACAGCAGTCTGACGACGACAATCGAGGAATTCATGCAAGAATGCTATGATAaAGCAGCAGAGTTTCGTGGTGAGGGCTCTCTGAAAAACATGAGGGACACGATTGAGAAGCATGTACGTGATGCAAAGAACATCATGTTTGAGCGGGCTAAAGATGAAATGATGAACCAGCTGAGAGACTTGATGGAAGAGATCCTGGAGGACCTGGAGAAAACAATGCAGGAATCAATCGAGCTGTCACTCAGCACATATGGTGACTCAATCCCAGatgTTACAGCGGAGCTTCAGATGGTGAAGAGCCACTACAATGAACTGATGAGAAACCTAAATGAAGAAACATCACAAGCTTGGTTTGCTCCTTGGAGAGAAACAGCCGAGGCCAGATTACCCACTGAAGGTCCTTCAGACACACTTGATTACTGACGTCAGGCCTCTGGATTTAGTCTCAACCATTTTAATCAAGTTATCTCTGTTCTTTTTGAGTGTTGTTTGGTGTAAATACTGGAACCATTATTCCCACGCTGACGCTGTGCCGGTCTAAATTAATTATTTCTACTTCATTCAAACATCAAAACAGTCAGCGAATTTGGACATGCCAGGGTAGTACTTTTATCATTCGTTCCTTTGATATTTTCAGAAATATTCCATGTTATTCATATTTTCAGCTGGAAACTCCATTTAAACCTTAAAATTTTCCACATCTTTCATACATTCCGGGTAGTATTCAACTTTCAAATCccattaaaacttaaaaacaaaaggTTAAACTTCATTTGAAGCTTAGTAAAAATGACCTCAGATTTTTACATTAGTGGTTGTGCTGATagttgtgcacacactacacTGGCATaggtatcccacaatgcaatgcagtaAAAACATAACCTTCATAACAGACACACGGACAGCAACCAAGGCAGCTCTGTAATGTCAAAACCGCTTcaatttacatttctacatataattttttttgtcacatgtgACTGCTGGAATAGTTGATTACCTTTTTAAGTAATTTAAGCATTATTTGGCGATGCCGCTAGAGCGGAGGTTGGCAGGGGTTACCGTGGTTTGCGTCTCCAacctggcttttgtttgatatctagTTTCGGCAATAAATGTTGTGCATGTGATGTGTTCATACTAACACCAAGTCAGTTTAGAGAGAAGATGATGGTCTGTGCATATTTCTGTTGCCTTTATTTACATGCTGTAAAGCCACCTAACAAGCCGTGCACATGTaaactgtcaaataaaacaGGCTTACGCCACAGAATGAATAATCAAATACTCATATTGAAGAGCCAAATCCATGATGACATGCAGCCAAGGCTCCCCAGTTGGATTCGAACCAGGGACGTTGTGAGTTTCATTGTACAAGCCTTAGCCATCATTCCACTGTGATGTCccagtgacattttttttataacttaacAGTTTTTTCTCATATATTTTGTAGGCCTTTTGCATTTATTAATACATGATTACTTTGGCAGAATGCATTCGTAAAGTGTGATTTGGACTTAATCTCTGATTGTTAGGATgatgtattatatatttctttccttttttatttctttagctTTTATATTCTTAATGTGTGGATATATGCATGGCATACTAAAAAGCTttataaaagtaattgtgtgcacatcccaccttctggcaggtgcaggacaaatgaaagtaCTTAAAACGAAAAGaatgtaatgtccgcaacactgctttaaactcccatatttaatataaaatgcaacgtttcgaccctacTGGGTCATATACTAAAAAGCTTACCATGGTTCTAAACATTGTGTTAAAATGATTGCCATGAAGCCAAATCAGTGAACAGGAAACGGGAAATTGTGGTTTAGCATGTAGCTGACAGGAAGCCGTCGCTGCTTGAAAGTTTGAACATTTCTATGaagaagacaggaaaggtgaGCCTCAAGCAAACATGTAGATGGTGTGATGATTCTCGCCTCTGAATattgagtacagcccctttaaatgCAATTACAGTACATACTCTAGACTGGATTTGGCATTGACTTTTTAAAGAATGATCTtgatcctttttcttttatgttCAAGGACATAAACGTTACTTACTGCAAATAcaagtttgtgtatttgtgtctttatttatatatgaaAAATAATGAGCTCTATGATAATAAACCAGCTTACCTGGCTTCTTGTCATTTACTGAACAATTGTTATGTTTTAATGTACACTGACTCTAAATGTATTTGATATGGTATACCTTAATAAAGTTCACATATTACAATTACAGTACATACTCTAGACTGGATTTGGCATTGACTTTTTAAAGAATGATCTTGATCCTTTTTCATTTATGTTCAAGGACATAACTGTTGCTTACTGAAAAAACgggtttgtgtatttgtgtctccATTCATATATGAAAAATAATGAGCTCTATGATAGTAAACAGCTTATCTGGCTTCTTGTCATTTACTGAACAATTGTTATGTTTTAAAGTACACTGactctaaataaataaagttcacATATTACAAAGTT

Function

GO: NA

KEGG:

id description
ko04064 NF-kappa B signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825506.1 True 4793 mRNA 0.39 23 13030216 13062840

Neighbor

gene id symbol gene type direction distance location
gpr139 gpr139 coding downstream 112877 12902581 ~ 12917339 (-)
LOC120574878 NA coding downstream 152002 12874376 ~ 12878214 (-)
si:ch211-139g16.8 NA coding downstream 166631 12861352 ~ 12863585 (-)
cdr2a LOC104947687 coding downstream 176485 12844396 ~ 12853731 (-)
trnal-uag_2 NA coding downstream 187242 12842893 ~ 12842974 (-)
LOC120574969 NA coding upstream 1413 13064253 ~ 13073926 (-)
LOC120574972 NA coding upstream 16244 13079084 ~ 13100217 (-)
LOC120574975 NA coding upstream 58021 13120861 ~ 13145929 (-)
LOC120574973 NA coding upstream 97985 13160825 ~ 13187553 (-)
LOC120574974 NA coding upstream 132110 13194950 ~ 13213720 (-)
G154515 NA non-coding downstream 76828 12871558 ~ 12953388 (-)
LOC120574707 NA non-coding downstream 91552 12931733 ~ 12938664 (-)
G154517 NA non-coding downstream 98897 12874360 ~ 12931319 (-)
G154446 LOC104918798,LOC100695608,LOC101483500,LOC105930091 non-coding downstream 248771 12779015 ~ 12781445 (-)
G154438 NA non-coding downstream 260094 12769409 ~ 12770122 (-)
G154600 NA non-coding upstream 190084 13252924 ~ 13253206 (-)
G154601 NA non-coding upstream 191633 13254473 ~ 13254773 (-)
G154713 NA non-coding upstream 593178 13656018 ~ 13692471 (-)
G154717 NA non-coding upstream 692824 13755664 ~ 13827791 (-)
G154723 NA non-coding upstream 711262 13774102 ~ 13775989 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other downstream 17435 12973260 ~ 13012781 (-)
iqck NA other downstream 57387 12954974 ~ 12972829 (-)
LOC120575506 LOC100697827 other downstream 292733 12735444 ~ 12737483 (-)
cep112 NA other downstream 464745 12427504 ~ 12565471 (-)
LOC120574419 NA other downstream 939235 12085985 ~ 12090981 (-)
prkar1b prkar1b,LOC107661853,LOC107653458 other upstream 272609 13335449 ~ 13421951 (-)
tfap4 tfap4 other upstream 526643 13589483 ~ 13631836 (-)
med9 med9 other upstream 987898 14050738 ~ 14057354 (-)
LOC120574967 mafg,LOC104918330,LOC108241257,LOC103373400,LOC101487863,LOC106533856 other upstream 1391997 14454837 ~ 14471430 (-)
cenpx cenpx other upstream 1463286 14526126 ~ 14529153 (-)

Expression


Co-expression Network