LOC120574969


Basic Information

Item Value
gene id LOC120574969
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 13064253 ~ 13073926 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825504.1
GGACAACTACTGAGAGTAGCAGAGACTCCTATCGCCTGCTTCACAGCGAGAGGATCGGCACTGATGCATATGTAGATAGCTCATCTACGCTACACACTATACAGTGAATTGCCATGGAGACACCTGATTTTGTCCGGGAAAAATTAACCGAATGGGGCTTCAATGATTTAGTCCAGAGATTTGAAGATGAAGGTATTGACAAGGAGATCTTTCTAAATCTTGAAGATACCAACATCAATGTCTTGATTCCTAAAATTGGACCAAGAGTCAAATTCAAACGGAGACTCAAAGAATACTTACAGTGGAAATCAATGGAGACATGTCATTTTGTCCAGGATAAATTAACTGAGTGGAATCTCAGTGAGTTGATTCACAGATTTGAAGaCGAAGGCATTGACAAGGAGACATTCTTAATTCTTGAGGAGTCAGGCAACTTAAATATCTTGATTCCTAAAATTGGACCAAGAGTAAAATTCAGAAAGAAACTCAGAGAATACTTACAGGCCCTGAAAAGAAAGCACGCTGATACTCCTGAAACGATCGACCCTGAAACTGACACAAACTCAGACCAGGAGGACATCCCTGAACTGGCCCTGAAAAGAAAGCACGCTGATACTCCTGAAATTATGGACActgaaactgacacaaattCAGACCAAGACGACATCCCTGAACTGGAACCAACTATTTTTCCATGGCACTTTGAGTCCCCTTCAACATCTGACAAAGATCGAGACAATGAGATGAGTGAGGAGCCAATGTCCAACAGGAACTCGAGTACTGGCCTACTTGCGGTGATACTCTTCATTTTGCGTCACCATCTAACTGTGGCTGTGGGTGACTTAATGGCTCTACTGAATTTTCTGAGCCCTAACCTGGTTGTTGCATCAAAGTATCTCTCTGATAAGATTATTGCCTTGTGTACTGTATTTTATTGTCATCGCTGTCAAAACTACATGGGAACAAATCCTCATGATGCTCCTTGTTCGCAATGTGGTACCGTGTTCAACAAAGAAAGCAGTACTAAAAATGGACACTTCTTTTTGTCTGCATCGCTGAAAGACCTTCTGAAAGATATCCTTAAGATCCATGGCACCGAGTTGTTACCTAAAACAGTCGCCCAAGGGAATATCATAAAAGATGTAATGGATGGGAGGATGTACCAGAATCTTTTGAAACAAGGAAGATTAGGTGCAGATGACCTCACACTGTCATGGAATAGTGATGGCGTACCAATTTATAACTCACCCATTCATTCATACTCGATTTGGCCCCTtcaatttattataaatgaacttccttacacacaaagacaggaaaATGTGATAGTTGCAGGACTTTGGTTTGGCCCAAAACCACCTAAGATGAACACATTTCTAAAGCCTTTCATAGATGAATGTCGTGATTTAGCACACAATCCCTTTCAGTGGAGTGACAGCAATGGCACAGTTCACCACTCAAAAGTCTTCTCCTTGATTTTCTCCTCTGACGCCATAGCAAGGCCACTCCTCCGGAATTGCAAACAATTCAATGGTGAATATGGTTGTGACTGGTGTTTACACCCTGGCATGATGGTCAAAAAAGGCAATGGAAATATGAGGTCCTACCCATATGATGAAGAGAAACAAGTAGCAAGGTCAAATGATACGTTTAAGAATAATGCAACACAGGCTAAAAAAGGGGTAAAAGGATTGTCCTTGCTTTGCGAACTTCCCTTTTTCGATGTAGTTTTTGGATTTGTACCAGAGTATTTGCACTCTGTTCTACTAGGTGTGTCCAAACAACTTATGTCTCTGTGGTTGGACAGAGTCAACTCTGAGAAACCTTGGTATGTAGGtcaacacatttcaaaaatgGATTCCCGTCTTCTCTGTCTAAGGTCTccattagaaaaaaaagaaaacacatctgTGCGATCACTGAAGTGTAGGAATTCTTGGAAAGCATCAGAGTGGCGAGCATTCCTTTTATTTTATGCTATTAGTGTCCTTCCTGGCATCCTGCCGCTTACATTTCTGGAACATTATTTTCACCTCTCATTTAGTATTCACATTCTGCTACAAGAATCAATATCCCAACATGAACTTAAGCTGGCCCATGAGTCCTTGGTGCACTTTGTAAAATACATGAAAGTACTCTATGGTGAAGAAAATGTGTCTTTCAACTGCCATCAGTTAATCCACTTAACTGAAAGTGTACTGAACTGGGGGCCTCTCTGGGCAACatcagcatttagttttgagAGAAACAATGGAAATTTAAGAGCTCTGCTTAAAGGTGTAAATGATTACCCTCGACAAATTCACCAGATGTTTCTCGTTTGGCAGCACATACCCAGACACCTTAGTTCTTTAGTTTTCAACAAACAATCAGATTTTGGTGAGTTATTAGACAAGCTCACACCAGTACAAGAAGGCAGTGGCTCTGACAAAGCCCTTGGAAAATCACGCCATCTGGATCTCACAGGATCCACAAAACTAGCAATAGAAGAGCTCCTAAATCGACCAGTTCTTGTCAAATCAGTAGAGGCTTATGACAGCTTCACTAATGGACACACTGTTTATCACTCTACAAACTGCAAAGAGATAGACAAGACAGCCTGTGTTATTAAACTTAAGAATGGCTGCTGTGGAGAAATACAGTTGATTCTACTTTTTAAAGAGAACTGTGTTTGCACATCCGCCTGTTTGTGCCAGGCTGTTCCAGTCATTGTGGTCAATCTGTATGACATCAAACCTGGTACATTGTTCAGCAAAACCCATCCGTCTGAGACTGTCTTTGTAAGAGTTGAAAGGACAGATCAACCTAAAGCTTTCTTCTTAGAGGATATCAGGTGTAAATGTAAGTATGTGGATGGTTGGCTTGTGCCTGTACCAAACACATTTGAGAGATATTAGAGTCACTGCGGGGCTAAAGCATTTGCAGCAGAGAAATCGTGATCAGTAACCACATACAGTAGATTGAACTTGCCTTGCCATCAACGTATTACTTAAAATTATAATCAGCAACCCTTCAGTGTTTCCCTGTTCCTTTACCAagtttttcatctctttttctgGTGCCAACAGGTGAGTTGCTATGtaagtatatgtatgtatttcagGAAGATCTAAAACGATGGACTACTGGCCCCTGGGCATTGTCTTTgatgtgaaaatacatttttatttagtgAGTATGGCAATGGAGGAGTTGAAGTGTTGAGCATGCAATGACTGGAATAGTTCTTAACAGTGGACGCCAAATGTCTCCATAACTGACTCATGTGTTATGTGATCATCTGTGCTTATTAGGATATTTTCTTTGAATGactgtatgtaaatatataaataaataataatttactgtGCCACTTTGACAATTAAAAGTCCAGGGGGGCAAATTGTAAAGAAGCAGACATTGTATATGTATCAGAAAGATATTTAGTAATTTTGGTCAAACACAATCTTACATTCCTTCATCTGAGGAGACTTCTTATAGACTTGTCATATAATACATGTTGGTTTTATTTCTACTGCTAACTACAAGGCTGGCATGGCATAACTTTCTCTAAATAACATCAACAGTTGGTACATTTTGTAAAGGTTAATGtgaaaaacaatgcaaaaatacaaaaatacttattattttgttgtatcaTGATACAAGTCATTACTGAAAGAGCAGCTACAGATAAACTCTGTTTACTTTGCTTAATATATTGTGTGATGATGCTAACTCCATATGATCTTAAGATGCGtgctagtctttttttttttagatacacTGAGAATGGctataaaacagaaatgtgtcAGTAAAAAAGTGCCTAC
>XM_039825505.1
GGACAACTACTGAGAGTAGCAGAGACTCCTATCGCCTGCTTCACAGCGAGAGGATCGGCACTGATGCATATGTAGATAGCTCATCTACGCTACACACTATACAGTGAATTGCCATGGAGACACCTGATTTTGTCCGGGAAAAATTAACCGAATGGGGCTTCAATGATTTAGTCCAGAGATTTGAAGATGAAGGTATTGACAAGGAGATCTTTCTAAATCTTGAAGATACCAACATCAATGTCTTGATTCCTAAAATTGGACCAAGAGTCAAATTCAAACGGAGACTCAAAGAATACTTACAGTGGAAATCAATGGAGACATGTCATTTTGTCCAGGATAAATTAACTGAGTGGAATCTCAGTGAGTTGATTCACAGATTTGAAGaCGAAGGCATTGACAAGGAGACATTCTTAATTCTTGAGGAGTCAGGCAACTTAAATATCTTGATTCCTAAAATTGGACCAAGAGTAAAATTCAGAAAGAAACTCAGAGAATACTTACAGGCCCTGAAAAGAAAGCACGCTGATACTCCTGAAATTATGGACActgaaactgacacaaattCAGACCAAGACGACATCCCTGAACTGGAACCAACTATTTTTCCATGGCACTTTGAGTCCCCTTCAACATCTGACAAAGATCGAGACAATGAGATGAGTGAGGAGCCAATGTCCAACAGGAACTCGAGTACTGGCCTACTTGCGGTGATACTCTTCATTTTGCGTCACCATCTAACTGTGGCTGTGGGTGACTTAATGGCTCTACTGAATTTTCTGAGCCCTAACCTGGTTGTTGCATCAAAGTATCTCTCTGATAAGATTATTGCCTTGTGTACTGTATTTTATTGTCATCGCTGTCAAAACTACATGGGAACAAATCCTCATGATGCTCCTTGTTCGCAATGTGGTACCGTGTTCAACAAAGAAAGCAGTACTAAAAATGGACACTTCTTTTTGTCTGCATCGCTGAAAGACCTTCTGAAAGATATCCTTAAGATCCATGGCACCGAGTTGTTACCTAAAACAGTCGCCCAAGGGAATATCATAAAAGATGTAATGGATGGGAGGATGTACCAGAATCTTTTGAAACAAGGAAGATTAGGTGCAGATGACCTCACACTGTCATGGAATAGTGATGGCGTACCAATTTATAACTCACCCATTCATTCATACTCGATTTGGCCCCTtcaatttattataaatgaacttccttacacacaaagacaggaaaATGTGATAGTTGCAGGACTTTGGTTTGGCCCAAAACCACCTAAGATGAACACATTTCTAAAGCCTTTCATAGATGAATGTCGTGATTTAGCACACAATCCCTTTCAGTGGAGTGACAGCAATGGCACAGTTCACCACTCAAAAGTCTTCTCCTTGATTTTCTCCTCTGACGCCATAGCAAGGCCACTCCTCCGGAATTGCAAACAATTCAATGGTGAATATGGTTGTGACTGGTGTTTACACCCTGGCATGATGGTCAAAAAAGGCAATGGAAATATGAGGTCCTACCCATATGATGAAGAGAAACAAGTAGCAAGGTCAAATGATACGTTTAAGAATAATGCAACACAGGCTAAAAAAGGGGTAAAAGGATTGTCCTTGCTTTGCGAACTTCCCTTTTTCGATGTAGTTTTTGGATTTGTACCAGAGTATTTGCACTCTGTTCTACTAGGTGTGTCCAAACAACTTATGTCTCTGTGGTTGGACAGAGTCAACTCTGAGAAACCTTGGTATGTAGGtcaacacatttcaaaaatgGATTCCCGTCTTCTCTGTCTAAGGTCTccattagaaaaaaaagaaaacacatctgTGCGATCACTGAAGTGTAGGAATTCTTGGAAAGCATCAGAGTGGCGAGCATTCCTTTTATTTTATGCTATTAGTGTCCTTCCTGGCATCCTGCCGCTTACATTTCTGGAACATTATTTTCACCTCTCATTTAGTATTCACATTCTGCTACAAGAATCAATATCCCAACATGAACTTAAGCTGGCCCATGAGTCCTTGGTGCACTTTGTAAAATACATGAAAGTACTCTATGGTGAAGAAAATGTGTCTTTCAACTGCCATCAGTTAATCCACTTAACTGAAAGTGTACTGAACTGGGGGCCTCTCTGGGCAACatcagcatttagttttgagAGAAACAATGGAAATTTAAGAGCTCTGCTTAAAGGTGTAAATGATTACCCTCGACAAATTCACCAGATGTTTCTCGTTTGGCAGCACATACCCAGACACCTTAGTTCTTTAGTTTTCAACAAACAATCAGATTTTGGTGAGTTATTAGACAAGCTCACACCAGTACAAGAAGGCAGTGGCTCTGACAAAGCCCTTGGAAAATCACGCCATCTGGATCTCACAGGATCCACAAAACTAGCAATAGAAGAGCTCCTAAATCGACCAGTTCTTGTCAAATCAGTAGAGGCTTATGACAGCTTCACTAATGGACACACTGTTTATCACTCTACAAACTGCAAAGAGATAGACAAGACAGCCTGTGTTATTAAACTTAAGAATGGCTGCTGTGGAGAAATACAGTTGATTCTACTTTTTAAAGAGAACTGTGTTTGCACATCCGCCTGTTTGTGCCAGGCTGTTCCAGTCATTGTGGTCAATCTGTATGACATCAAACCTGGTACATTGTTCAGCAAAACCCATCCGTCTGAGACTGTCTTTGTAAGAGTTGAAAGGACAGATCAACCTAAAGCTTTCTTCTTAGAGGATATCAGGTGTAAATGTAAGTATGTGGATGGTTGGCTTGTGCCTGTACCAAACACATTTGAGAGATATTAGAGTCACTGCGGGGCTAAAGCATTTGCAGCAGAGAAATCGTGATCAGTAACCACATACAGTAGATTGAACTTGCCTTGCCATCAACGTATTACTTAAAATTATAATCAGCAACCCTTCAGTGTTTCCCTGTTCCTTTACCAagtttttcatctctttttctgGTGCCAACAGGTGAGTTGCTATGtaagtatatgtatgtatttcagGAAGATCTAAAACGATGGACTACTGGCCCCTGGGCATTGTCTTTgatgtgaaaatacatttttatttagtgAGTATGGCAATGGAGGAGTTGAAGTGTTGAGCATGCAATGACTGGAATAGTTCTTAACAGTGGACGCCAAATGTCTCCATAACTGACTCATGTGTTATGTGATCATCTGTGCTTATTAGGATATTTTCTTTGAATGactgtatgtaaatatataaataaataataatttactgtGCCACTTTGACAATTAAAAGTCCAGGGGGGCAAATTGTAAAGAAGCAGACATTGTATATGTATCAGAAAGATATTTAGTAATTTTGGTCAAACACAATCTTACATTCCTTCATCTGAGGAGACTTCTTATAGACTTGTCATATAATACATGTTGGTTTTATTTCTACTGCTAACTACAAGGCTGGCATGGCATAACTTTCTCTAAATAACATCAACAGTTGGTACATTTTGTAAAGGTTAATGtgaaaaacaatgcaaaaatacaaaaatacttattattttgttgtatcaTGATACAAGTCATTACTGAAAGAGCAGCTACAGATAAACTCTGTTTACTTTGCTTAATATATTGTGTGATGATGCTAACTCCATATGATCTTAAGATGCGtgctagtctttttttttttagatacacTGAGAATGGctataaaacagaaatgtgtcAGTAAAAAAGTGCCTACCGTGAA

Function

GO: NA

KEGG:

id description
ko04064 NF-kappa B signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825504.1 True 3812 mRNA 0.39 9 13064259 13073926
XM_039825505.1 False 3731 mRNA 0.39 8 13064253 13073926

Neighbor

gene id symbol gene type direction distance location
LOC120574970 NA coding downstream 1413 13030216 ~ 13062840 (-)
gpr139 gpr139 coding downstream 146914 12902581 ~ 12917339 (-)
LOC120574878 NA coding downstream 186039 12874376 ~ 12878214 (-)
si:ch211-139g16.8 NA coding downstream 200668 12861352 ~ 12863585 (-)
cdr2a LOC104947687 coding downstream 210522 12844396 ~ 12853731 (-)
LOC120574972 NA coding upstream 5158 13079084 ~ 13100217 (-)
LOC120574975 NA coding upstream 46935 13120861 ~ 13145929 (-)
LOC120574973 NA coding upstream 86899 13160825 ~ 13187553 (-)
LOC120574974 NA coding upstream 121024 13194950 ~ 13213720 (-)
LOC120574422 NA coding upstream 152541 13226467 ~ 13262644 (-)
G154515 NA non-coding downstream 110865 12871558 ~ 12953388 (-)
LOC120574707 NA non-coding downstream 125589 12931733 ~ 12938664 (-)
G154517 NA non-coding downstream 132934 12874360 ~ 12931319 (-)
G154446 LOC104918798,LOC100695608,LOC101483500,LOC105930091 non-coding downstream 282808 12779015 ~ 12781445 (-)
G154438 NA non-coding downstream 294131 12769409 ~ 12770122 (-)
G154600 NA non-coding upstream 178998 13252924 ~ 13253206 (-)
G154601 NA non-coding upstream 180547 13254473 ~ 13254773 (-)
G154713 NA non-coding upstream 582092 13656018 ~ 13692471 (-)
G154717 NA non-coding upstream 681738 13755664 ~ 13827791 (-)
G154723 NA non-coding upstream 700176 13774102 ~ 13775989 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other downstream 51472 12973260 ~ 13012781 (-)
iqck NA other downstream 91424 12954974 ~ 12972829 (-)
LOC120575506 LOC100697827 other downstream 326770 12735444 ~ 12737483 (-)
cep112 NA other downstream 498782 12427504 ~ 12565471 (-)
LOC120574419 NA other downstream 973272 12085985 ~ 12090981 (-)
prkar1b prkar1b,LOC107661853,LOC107653458 other upstream 261523 13335449 ~ 13421951 (-)
tfap4 tfap4 other upstream 515557 13589483 ~ 13631836 (-)
med9 med9 other upstream 976812 14050738 ~ 14057354 (-)
LOC120574967 mafg,LOC104918330,LOC108241257,LOC103373400,LOC101487863,LOC106533856 other upstream 1380911 14454837 ~ 14471430 (-)
cenpx cenpx other upstream 1452200 14526126 ~ 14529153 (-)

Expression


Co-expression Network