G157904


Basic Information

Item Value
gene id G157904
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 25164202 ~ 25167988 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU214004
GGATCTCAGCTCTCCATCTCCTGGTTGCAGCGATGACTCTGAGACCGTTCGTCCACGTTTAAGAGTCTCCCTCACAACTAGATGtgtGCGGTATAACTCGGCTCAACGCCAGGATTGTTGGAGGACAGAACGCCCCTCCGGGTAACTGGCCCTGGCAAGCCAGCCTGCAAACATTTGGGAGCCACTTCTGTGGAGGATCCCTCATTAACAGTGAATGGGTG

Function

GO:

id name namespace
GO:0005507 copper ion binding molecular_function

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05133 Pertussis
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU214004 True 221 lncRNA 0.55 3 25164202 25167988

Neighbor

gene id symbol gene type direction distance location
LOC120575275 NA coding upstream 28280 25117079 ~ 25135922 (+)
LOC120575217 NA coding upstream 139602 25009949 ~ 25024600 (+)
LOC120575218 NA coding upstream 180328 24960818 ~ 24983874 (+)
fus LOC103040960,LOC101075112 coding upstream 229650 24916668 ~ 24934552 (+)
arl6ip1 arl6ip1 coding upstream 263424 24894031 ~ 24900778 (+)
LOC120575220 NA coding downstream 136 25168124 ~ 25174704 (+)
mfsd11 mfsd11 coding downstream 38195 25206183 ~ 25215992 (+)
LOC120574196 LOC104946427 coding downstream 49100 25217088 ~ 25244583 (+)
foxj1a foxj1,LOC102198006 coding downstream 111414 25279402 ~ 25285893 (+)
amdhd2 amdhd2 coding downstream 135053 25303041 ~ 25314893 (+)
LOC120575222 NA non-coding upstream 90965 25065606 ~ 25073237 (+)
G157873 NA non-coding upstream 228874 24916571 ~ 24935328 (+)
G157872 NA non-coding upstream 247804 24914702 ~ 24916398 (+)
G157854 NA non-coding upstream 289015 24871963 ~ 24875187 (+)
G157838 NA non-coding upstream 293336 24867376 ~ 24870866 (+)
G157877 eif1b,LOC107396491,LOC101163413,LOC103469494,LOC100702522,LOC104946424 non-coding downstream 23717 25191705 ~ 25194343 (+)
G157915 NA non-coding downstream 81327 25249315 ~ 25249587 (+)
LOC120574200 NA non-coding downstream 92945 25260933 ~ 25262297 (+)
G158005 LOC104963332,LOC104953734,LOC104942256,LOC104948352 non-coding downstream 160079 25328067 ~ 25331668 (+)
LOC120574001 NA non-coding downstream 203978 25371966 ~ 25373342 (+)
LOC120575219 NA other upstream 61691 25083281 ~ 25102511 (+)
LOC120574235 anapc2 other upstream 304430 24852538 ~ 24859772 (+)
rab40c rab40c,LOC103366693,LOC107690266,LOC107567894,LOC107685905,LOC107590575,LOC103393433 other upstream 440332 24702819 ~ 24723870 (+)
grin2ca LOC103366762 other upstream 1026619 24053726 ~ 24137583 (+)
G157468 NA other upstream 2264431 22896406 ~ 22899771 (+)
srsf2b LOC104946423,LOC101476251,LOC100695205 other downstream 29660 25197648 ~ 25202835 (+)
G158004 NA other downstream 162447 25330435 ~ 25367712 (+)
zgc:158403 LOC103370216,LOC106932766 other downstream 215376 25383364 ~ 25403052 (+)
G158184 NA other downstream 864316 26032304 ~ 26036164 (+)
LOC120575027 NA other downstream 921664 26089652 ~ 26091008 (+)

Expression


Co-expression Network