LOC120575275


Basic Information

Item Value
gene id LOC120575275
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 25117079 ~ 25135922 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825994.1
ATGGCTCTCTACAAGGTGATCGGTGCGGTGGCTCTGCTGACTCTCCTGACACACGAGTCTCACTCACAACTAGATGtgtGCGGTAAAACTCGGCTCAACACCAGGATTGTTGGAGGACAGAACGCCCCTCCGGGTAACTGGCCCTGGCAAGCCAGCCTGCAAACATCTGGGAGCCACTTCTGTGGAGGATCCCTCATTAACAGTCAATGGGTGGTGACTGCTGCTAACTGCTTCTTAAGCATCCCAGCCAGTCTGACTGTGTCTCTGGGTCTCCAGAGTCTACAGGGACCCAACCCCAATGGGGTGTCTCGGACGGTAACAAAGATCATCGTAAATCCTAACTTTGACTACATGATTGGTGACAACGACATCTGcctcctgcagctctcctcACCAGTGACGTTCACAGATTTCATTGTTCCGATCTACCTGGCAGCTCCAGGCAGCACCTTCTTCAGCGGCGTTAGCTCCTGGGTGACCGGCTTTGGCGCCATTGCATCCGGAGTTTACCCTCCTCTCCCAGTAAACCTAATGGAGGTGAATGTGCCAATTGTGGGGAACAGACAGTGTAACTGCGATTATGGTGTGGGCCGAATCACGAACAACATGATCTGTGCCGGGTTAAGTGCTGGAGGGAAGGGCCCCTGTCAGGGGGATTCAGGTAGTCCGCTGGTGAGCAAGCAGGGCAGCCGCTGGATCCTGGGGGGAATCGTAAGTTTTGGAAATGGTTGTGCCGAGCCTAATACCCCAGGAGTCTACACCAGAGTGTCCCAATATCAGTCCTGGATCAACAGCCAGATCACCAGCAGCCAGCCGGGCTTTGTCACCTTTACATCCACTGGAACTGACAGTGACCTCAGGATcagctgtgctggcctgccacCGCCTCCAACCACCCTCCCTCCAACCACCCTCCCTCCAACCACCCTCCCTCCAACCACTACAACCACCCTCCCTCCAACCACTACAACCACCCTCCCTACAACCACAGtgtGCGGTATAACTCGGCTCAACACCAGGATTGTTGGAGGACAGAACGCCCCTCCGGGTAACTGGCCCTGGCAAGCCAGCCTGCAAACATCTGGGGGACACTTCTGTGGAGGATCCCTCATTAACAGTGAATGGGTGCTGACTGCTGCTCACTGCTTCCCAAGCATCCCAGCCAGTCTGACTGTGTCTCTGGGTCTCCAGAGTCTACAGGGACCCAACCCCAATGGGGTGTCTCGGACGGTAACAAAGGTCATCGTAAATCCTAACTATAACGCCATAAGTTATGACAACGACATCTGcctcctgcagctctcctcACCGGTGACCTTCACAGATTTCCTTGTTCCGATCTGCCTGGCAGCTCCAGGCAGCACCTTCTTCAGCGGCGTTAGCTCCTGGGTGACCGGCTTTGGCGCCATTGCATCCGGAGTTTACCCTCCTCTCCCAGTAAACCTAATGGAGGTGAATGTGCCAATCATGGGGAACAGACAGTGTAACTGTGACTATGGTGTGGGCTCAATCACGAACAACATGATCTGTGCTGGGTTAAGTGCTGGAGGGAAGGACACCTGTCAGGGGGATTCAGGTGGTCCGCTGGTGAGCAAGCAGGGCAGCCGCTGGATCCTGGGGGGAATCGTAAGTTTTGGAAATGGTTGTGCCCAGCCTAATACCCCAGGAGTCTACACCAGAGTGTCCCAATACCAGTCCTGGATCAACAGCCAGATCACCAGCAGCCAGCCGGGCTTTGTCACCTTCACGTCCACTGGAACTGACAGTGACCTCAGCATcagctgtgctggcctgccacCGCCTCCAACCACCCTCCCTCCCTAAAACCACTACaaccaaacaacaacacaaattaatGTAAATGTTCTGAGTTTCTGAAGGGTAACTGCTATCAGTCTAAAATGAAGGGTGTAAAATGAAGACTGGTTTAAGTTGCACTAAACAAATGTCTATGTAATATGTTGTCAATTGTTGACAGTGACCTCAGCATcagctgtgctggcctgccatGATTATTTGTCATTGACATGAAGTGTCACCCTAAACTGACACAGAGAAGGATGCATTTATGATTACTTTGCAGATAGAGTCAAACTAACTTTATGTCAGAGAAGGCTTTAACACGTGCAATGAAATGAAAGCTACAGAAGCATATTTTGGAGGCCTGAGGAACACAGTAACTTTTATCAGCTTGTCCATCATCTACCTCAGAGAGCTACTGTATGTTTATATCTATCTGAAGCAGTTTATGTACACAAACTGTATTTGCTGCACTTTAAATGGATATTTCTTTGGTTTGAATGCTTAATGCCAATTCTTGCATAGTCTTGTCCAGTAAATGTGAAGTCCTTTCTGTTCGCTTGA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825994.1 True 2364 mRNA 0.51 10 25117079 25135922

Neighbor

gene id symbol gene type direction distance location
LOC120575217 NA coding upstream 92479 25009949 ~ 25024600 (+)
LOC120575218 NA coding upstream 133205 24960818 ~ 24983874 (+)
fus LOC103040960,LOC101075112 coding upstream 182527 24916668 ~ 24934552 (+)
arl6ip1 arl6ip1 coding upstream 216301 24894031 ~ 24900778 (+)
LOC120574228 LOC102295563,LOC103366689,LOC100703873,LOC102207615 coding upstream 316775 24762190 ~ 24800304 (+)
LOC120575220 NA coding downstream 32202 25168124 ~ 25174704 (+)
mfsd11 mfsd11 coding downstream 70261 25206183 ~ 25215992 (+)
LOC120574196 LOC104946427 coding downstream 81166 25217088 ~ 25244583 (+)
foxj1a foxj1,LOC102198006 coding downstream 143480 25279402 ~ 25285893 (+)
amdhd2 amdhd2 coding downstream 167119 25303041 ~ 25314893 (+)
LOC120575222 NA non-coding upstream 43842 25065606 ~ 25073237 (+)
G157873 NA non-coding upstream 181751 24916571 ~ 24935328 (+)
G157872 NA non-coding upstream 200681 24914702 ~ 24916398 (+)
G157854 NA non-coding upstream 241892 24871963 ~ 24875187 (+)
G157838 NA non-coding upstream 246213 24867376 ~ 24870866 (+)
G157904 NA non-coding downstream 28280 25164202 ~ 25167988 (+)
G157877 eif1b,LOC107396491,LOC101163413,LOC103469494,LOC100702522,LOC104946424 non-coding downstream 55783 25191705 ~ 25194343 (+)
G157915 NA non-coding downstream 113393 25249315 ~ 25249587 (+)
LOC120574200 NA non-coding downstream 125011 25260933 ~ 25262297 (+)
G158005 LOC104963332,LOC104953734,LOC104942256,LOC104948352 non-coding downstream 192145 25328067 ~ 25331668 (+)
LOC120575219 NA other upstream 14568 25083281 ~ 25102511 (+)
LOC120574235 anapc2 other upstream 257307 24852538 ~ 24859772 (+)
rab40c rab40c,LOC103366693,LOC107690266,LOC107567894,LOC107685905,LOC107590575,LOC103393433 other upstream 393209 24702819 ~ 24723870 (+)
grin2ca LOC103366762 other upstream 979496 24053726 ~ 24137583 (+)
G157468 NA other upstream 2217308 22896406 ~ 22899771 (+)
srsf2b LOC104946423,LOC101476251,LOC100695205 other downstream 61726 25197648 ~ 25202835 (+)
G158004 NA other downstream 194513 25330435 ~ 25367712 (+)
zgc:158403 LOC103370216,LOC106932766 other downstream 247442 25383364 ~ 25403052 (+)
G158184 NA other downstream 896382 26032304 ~ 26036164 (+)
LOC120575027 NA other downstream 953730 26089652 ~ 26091008 (+)

Expression


Co-expression Network