G158292


Basic Information

Item Value
gene id G158292
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 26604087 ~ 26609349 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU214581
CGCATAGCCACCCAGCCCCAATTACCGTCTTTTGAGCTGAATACCTTCTAATTACGTGAACGTCTTAGCATAAGCAGTACATTAATACTCAAGTGGGAGATACTCCGAATGTTTCCAACTTTCTTGACATTTACCGCGCAGTCAGTGGCTCCCTTGTTTCTGTCTCCTATCTTGATCTTAAGTCCTTGCACAGGGTCTCTCCCCCACCATTCGCCATCTCCCTCAGATGTTGAGGGCAGCAGGatgccaggaaaaaaaaaaaaaaaaacactcttttCAAAAGTCATGGAGTGAGCTTTACTATGCGAGACCGCTGAAACCCCCTTCAGGGGGAGGAGGAAAGGCCTCGAACTCTCTGCAGAGGTTCATTCTAAGCAGGGAGTCCGTTCCTTTTAATGTAATCCCTGCACCACTTCCTGTTGTGGCCACTCCTGACGCCAGTAATggttcctttctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgatgcataCTACTGTAGAAAGATCAGTCTTTATACGCTctgatttgtgtatttgtgtcagcGAGAATCCTCTCTGGTGGTGCAAGAGCCTTTTATAAAGTTTTTCTCTCATCCCACTGAAgcagtattttttttgtctctctctttttatccACTGAAACAATTCAAGCCCCTTGAGCGAAGctactgaaagaaagaaagagacagcaacagagatggagggagggagggagagagtggAAACAGAACAGAGACTGCCACAGCGACAGCAAACTCGCTATCACCAACGGATGATGCCGTCCCGCCTTTGGGCCAATCAGACTCATTTGTAGAATGGTGGTGTGCACCAGTGTGATGGCTGCACCTGCTGCCACACAACTGATAGTAACTCACAACCACTGAGATTACATTAAACAAGATCTAAGATCTAATCAGCGCTGTCTGAAGTGGCAAGTGGATGAACAAATAAATGATTCACGTAAtgtctcctccccccccccctttgggCCAAATCACTGTAATTTAAAACGCATGGAAACACATTGATGCATCATTTCCTCGAGGTTTGCGCTAATCTGATCAGCTAATTTGTGTGAGATATCAAGTGTGACACGTGGACAAACAATTGTGAAGATTAGCATCCCCCTGAGTGTTAGTGCTAAAAACACTGCCTCCCCCTGGTTTAGTTAAAATCACATTTGTGATGTCGGCAGTACCATGTGTCACAAACGTACCAAACCCAAGCAGGCATGATTCTAATTGTGTTTAGTTCTTAGTTCTTACCAATGACTGTGTATAAAGATGTACGACGCGTCTCCACTTTCTCCCAccgtacaaaagtgaagccaaaatgtcCCGGATACGGGCGCTGCCCTCTTGTAATTTTAGAGCCAGAGTCTGGGCAGTAGTGATTGGGCAATGGAGCTTTGGTAACGAAAGTCCTGCCCAAACAGTACACCCACCCGACCAATCACGAGTCaatcccagctgtcaatcatgacattTTACCcagtttttatagcatcaaataactaataaaaaccaaacttatCGGACAAATTAAGACTCGAACAAACATTATCAGCCTGATAAtaactacctaaaatgacagaaaccatctttgggaaGAATTTATTTGTCGTGTACTTTTTTTAGTTTGGCCCATGACCCATCGCTAACATGGAGGGGGCGGTGTTTATGACCTAttctgcagccagccaccagggggtgatccagatgttttggcttcacttgtacagtctatgcatcaaccCTTGATAAAGATGCCATGACAGCTCCCCAAAACgaagccaaaacatctcgaACCCCCCACTGGTGGCTGGCTCCAAAATAGcattttaggtagttcttaTCACACTGATGTTTGTCGTGataattcatttcatttttttttcggTTATTTGCGGCTATAAAAAGGGTGTGTGACGTCACGATTGAAAGCGGCGATTGTGCTCGCGTATAAGTCGGGTGTAGGGGCGTAACCAACGGTTCAGATTACAGTTTTGAGTCCCGtatcggatttttaaaatttttttttcatgctttcCATGTTTTTACTACTACAAAGaactatcaaaaaaaaaaaaaactgcgtgTTCAAGTCAGGGAGCAGAGTTTGCTTTCCTGGGGAAAACAAAGACCTTTCATCCTGGAAATgtgtgttccttgggagtgttttaatccaaaccatgatctttttcctaaacccaactattcgttttggtgcctaaacttaactgtaatgtccgaccaaacgaccggcagctcgcggtgcccTGTACACGGCTCAAAGCCCCGTATTGTTGGGTAACTCAACTACCAACTGCTGCAGATACGACAGAGCTCTGTAGCAAGCGTCGGCTTTTCAAGTTATTCCGCTCCTCCAGTAGCCATGACCGTCTCGATCGACTGCTTTTAACATGCTCTGTTCAAAGAAactgcgttgcctgtatctttttaCGGCAACCCTCCATAGAGATTTATCAGCCTACTTTAAGTAAccgtgataaaaaaaaattcacactATTATTATGTAAACTTCGCAATTAATCCGCGGTTCACATGCATTCCAAATCGTGGTTGTTGATCCGTACGGACCATGTCTCAACTATGGTCCATTACACCACTAGTTGGGTGGGTGTATGAGCGGGAATTTCTATACTGCAGCTTCCCCGGTCACTACTGcacagactctggctccaaatgACGTGACCAGCGCATGATAGCAGAGCCCGATTCCGTGATATTTTGGCTTCATTTTTGTCTCGAGGCAGAAAGGCCATCCTTATATACAGTGTATGGTTCTTAAAGATAAAAGAATGTGCACTATCAAAGAGAGACATAAAAGGACAAAAACTAATATAATATGagaaaaattacaattatttctttcgtttttgtcatttcttttcataaaagttgccaaatggtccAATAAATCCATGcaaaaccaataaaataaaagaaccaATAGGACGGGGTTTTAGAGTGCTAGTGTGTTTAGATACCGGAATATTTGATCAAAGAATGAGTAAACACGATTATGAATCTGACCAGACATTTTGTAGTAAGATTTACAGCTGcactaatttaattttttaacacCAATGTGAAATGTGTGTGAAGCACATAAGGAGAAACCCACAGAGAGTTATCACTGACTCTGCAGTTGTTTTATCAGGTTGTAGCTCAGTGTTTTACTGCCACTTAACTTGAATGTTGTCATTCAAATTCAAGTAGCCAAACAATCTATAATTACATTGACTACAAGAGGTGGAGAGCTAGGCACAATGCTGATACCAGGGTTTATGTTTTCCAAGACAAATTCCAGTCTTCTCTGCTTTCTTCCAGACCTTAATACCTTTAGGTCGGTCCTTGGCCAGTTTTCAAGATAATAGGCTTTGTTTAAATCCCCTTCATATTATCCTGCCTTTATCCCACATTACTGACAGACACAGTGGATACCATTGTGGGGTACAGGGCCCCCTACGTTCATCtaaatcaggggtgtcaaacatacgGCCCGTGGGCCAGGACCGGCCCgccaaagggtccaatcaggcccactggatgactttgcaacGTGTCAAAACTGCAGAGAAGTAATTAATTCCAATTCCAAATTTaccactctctcacacactctcttaatctcagagaatatcaGAGTTCTTTTTCCGTAAATTTACGTCTTTAATCTTAGAGTTTTTTCTCGGAATATTATCCCTCTGCCCCGGGTCTGTAGAATGCAGTCGAGGCAGAAGCAACTTGCGTTcgccaacatcaagctgacaagaaactctgtggcagaaAAAGCTTCTGATCTTTCTGAAGTGGTTTACTGGTCCggcccacttgagatcaaattAGGGGTATGTGGTCCATGAACAAAAATGAGTCTGACACCCCTGATCTAAATGGTTTAGAAATATACGGAGTAGGATAAACAAACTTTGTTTTCcacaaatcattttatttttttttttttttttccatttagcAAAGGAAGTCACATTTCAACCAGTGGAAATCTCTCTGCCTAAAAACggttttgttattgttgtcaTGAATATTTCAGTGCGTGTTCCATTTGCTGTGGTTGTTGAACTTGTTGTGGCTGTCAGGGTATACAGGAAAATAACAGAAACCAAAATGGTGGAAATCGGTGAGGACAAAGAAAACCGACATGATAGCCATGCTATCATGACTGTCCGCACAacatgtcatggcaatccaatCCACTGACCAACCGACGGACAGGACGACATTGTCATGAATAGAGCCaataattaaaaacacagcaaaaactaaaatatgcaaaacatttgaaaacacagaGAGCATGTACAGCTTCAcagacagctcagcctcaggaCAGAGCACTGGAAATCAAAAAGCATTCAAGACAAGCTTCTGATGCAGGACAAACAGCCTGCCCCAAGGAGAAACTGTTCCACTTTGTATCTTTAATAGAGTGTGAAATAAGCACTCATTTTATTCTTCAGTTCCTAGTCAAACCACGAAACCTTAACAATTCAGAAATTTCCCCAAACACATATTTGCACTAAAACACTGCTGTGCCGGTATCACGTGTACTGTAGTTGTGCAGCAGATGAAATGATCAATTGCCAAAATGTACGTTGATGCATAGATTCTCATTTGGGCATTATTCTACACATTTTATGTGACTTACTGACTTGCTAAGCCAATAGATAACCCTAACCTGATTCAAGCAGGAGCACCTTATatgttgtagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtatatgtattgCAGGTCTTTCAGGCAGCCCTGGATGTGTAAATGAGTGTGATTTGGCCACCGGATGTCTTGTAGCAGACAGGAAATTATGATGGCTGACAGGagcaaacgccctgcaacttaatgaaacacacgcaaatagacaaaacacaagcaaataaaaaaaataaaaacaccttcattaatttgacaacatatgtgcagcatttagcaaacgcactgcaaatacacacaacacaaccaaatgcACAAACGtgctgcaaaaagaaaagcagttttcggggattgtgtgcttttctttttttgtgttgtgtgtatttgcagcgcgtttgctaaatgctgcgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU214581 True 5177 lncRNA 0.42 2 26604087 26609349

Neighbor

gene id symbol gene type direction distance location
LOC120574712 LOC102077703,LOC102789758,LOC102295644,LOC101478841,LOC107104997 coding upstream 114398 26484137 ~ 26489689 (+)
prl LOC103358656 coding upstream 122117 26475037 ~ 26481970 (+)
LOC120575278 NA coding upstream 335585 26250843 ~ 26268502 (+)
LOC120574687 NA coding upstream 378041 26202967 ~ 26226046 (+)
syt5a LOC105920779,LOC103358649,LOC101481810,LOC102228091,LOC102207842 coding upstream 442932 26142535 ~ 26161155 (+)
jupb LOC103359554,LOC100701331,LOC102214474,LOC101475556 coding downstream 130688 26740037 ~ 26886302 (+)
sept12 LOC104934564 coding downstream 828928 27438277 ~ 27538689 (+)
hao1 hao1 coding downstream 1054904 27664253 ~ 27671058 (+)
LOC120575474 NA coding downstream 1152629 27761978 ~ 27774184 (+)
zgc:86896 LOC104927173,LOC107391795,LOC103363450,LOC103393532 coding downstream 1250474 27859823 ~ 27872407 (+)
G158259 NA non-coding upstream 111775 26328191 ~ 26492312 (+)
G158245 NA non-coding upstream 259603 26340639 ~ 26344484 (+)
G158205 NA non-coding upstream 484541 26119104 ~ 26119546 (+)
G158204 NA non-coding upstream 485430 26117148 ~ 26118657 (+)
G158187 LOC103376870 non-coding upstream 555626 26040679 ~ 26048461 (+)
G158296 nsf,LOC102297066,LOC101477540 non-coding downstream 21251 26630600 ~ 26632308 (+)
G158359 NA non-coding downstream 72490 26681839 ~ 26685666 (+)
LOC120575007 NA non-coding downstream 95323 26704672 ~ 26707686 (+)
G158371 NA non-coding downstream 250803 26860152 ~ 26861591 (+)
LOC120574958 NA non-coding downstream 281640 26890989 ~ 26907662 (+)
G158276 NA other upstream 134320 26455638 ~ 26469767 (+)
LOC120575027 NA other upstream 513079 26089652 ~ 26091008 (+)
G158184 NA other upstream 567923 26032304 ~ 26036164 (+)
zgc:158403 LOC103370216,LOC106932766 other upstream 1201035 25383364 ~ 25403052 (+)
G158004 NA other upstream 1236375 25330435 ~ 25367712 (+)
LOC120575279 NA other downstream 790527 27399876 ~ 27400968 (+)
smg1 smg1 other downstream 992444 27601793 ~ 27661623 (+)
G158612 NA other downstream 1439163 28048512 ~ 28052449 (+)
G158767 gps1 other downstream 1917486 28526835 ~ 28532630 (+)
rras rras other downstream 2130319 28739668 ~ 28767614 (+)

Expression


Co-expression Network