Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120574928 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053126.1 |
| NCBI id | CM020923.1 |
| chromosome length | 38831509 |
| location | 34272118 ~ 34273253 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | name | namespace |
|---|---|---|
| GO:0050877 | nervous system process | biological_process |
| GO:0050953 | sensory perception of light stimulus | biological_process |
| GO:0007600 | sensory perception | biological_process |
| GO:0007601 | visual perception | biological_process |
| GO:0003008 | system process | biological_process |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU217105 | True | 425 | lncRNA | 0.39 | 2 | 34272119 | 34273253 |
| XR_005641925.1 | False | 358 | lncRNA | 0.40 | 2 | 34272118 | 34273185 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:66474 | NA | coding | upstream | 53387 | 34213522 ~ 34218731 (+) |
| LOC120574922 | NA | coding | upstream | 98974 | 34170327 ~ 34173144 (+) |
| sgf29 | sgf29 | coding | upstream | 247559 | 34014534 ~ 34024559 (+) |
| LOC120574905 | NA | coding | upstream | 276049 | 33989477 ~ 33996069 (+) |
| LOC120575301 | NA | coding | upstream | 417230 | 33852359 ~ 33854888 (+) |
| LOC120575309 | LOC107740693 | coding | downstream | 17633 | 34290886 ~ 34296422 (+) |
| LOC120574915 | NA | coding | downstream | 246071 | 34519324 ~ 34522700 (+) |
| LOC120574921 | NA | coding | downstream | 262707 | 34535960 ~ 34550715 (+) |
| LOC120574912 | NA | coding | downstream | 320698 | 34593951 ~ 34603781 (+) |
| jmjd6 | jmjd6 | coding | downstream | 369255 | 34642508 ~ 34647627 (+) |
| LOC120574932 | NA | non-coding | upstream | 25365 | 34244113 ~ 34246753 (+) |
| G160331 | NA | non-coding | upstream | 55633 | 34215921 ~ 34216485 (+) |
| G160321 | NA | non-coding | upstream | 87602 | 34184276 ~ 34184516 (+) |
| G160239 | NA | non-coding | upstream | 120719 | 34150428 ~ 34151399 (+) |
| LOC120574937 | NA | non-coding | upstream | 187997 | 34081742 ~ 34084121 (+) |
| LOC120574933 | NA | non-coding | downstream | 5893 | 34279146 ~ 34281366 (+) |
| G160402 | NA | non-coding | downstream | 276377 | 34549630 ~ 34605618 (+) |
| LOC120574936 | NA | non-coding | downstream | 366572 | 34639825 ~ 34641101 (+) |
| G160420 | NA | non-coding | downstream | 366933 | 34640186 ~ 34640634 (+) |
| G160424 | NA | non-coding | downstream | 374445 | 34647698 ~ 34649825 (+) |
| G160318 | LOC104961098 | other | upstream | 88457 | 34183099 ~ 34183661 (+) |
| G160243 | NA | other | upstream | 104472 | 34167080 ~ 34167646 (+) |
| LOC120574293 | NA | other | upstream | 728957 | 33463255 ~ 33543161 (+) |
| LOC120574300 | NA | other | upstream | 960513 | 33307453 ~ 33311605 (+) |
| G159938 | NA | other | upstream | 1109307 | 33162395 ~ 33162811 (+) |
| LOC120574901 | NA | other | downstream | 576336 | 34849589 ~ 34928475 (+) |
| G160423 | mvp | other | downstream | 688847 | 34962100 ~ 34966949 (+) |
| LOC120575316 | NA | other | downstream | 772464 | 35045717 ~ 35055656 (+) |
| LOC120575321 | keratin,LOC103393440,LOC106904882 | other | downstream | 1353262 | 35626515 ~ 35648984 (+) |
| G160851 | LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 | other | downstream | 1816367 | 36089620 ~ 36125552 (+) |
