aldh16a1 (aldh16a1)


Basic Information

Item Value
gene id aldh16a1
gene name aldh16a1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 26077619 ~ 26101488 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825601.1
ATGGCTGGTAGCACCATCAATACAGTGCAGAATATTTTTCAAAGCATGGAGTACGGACCAGCAGCAACTCCGAGCACTGCCACTGCACAGGCCTGGTTGGATAACCATTCCCGCTCTCTGGGTCTGTTCTTCGATGGCAAGTTTGTCCGTCCAGCAGACAGACATCGCTCCCTGGCTGATTCTAAAGGTGGTCATGTGTGCAGCACAGTGTGCGCTGTGGAGGCAGATGTTTCCCAGGCTGCCTCCTCTGCTGTTAGCGGCCACAAGGCCTGGAGCGGCCTGAGCTGCTACCAAAGGGCCAAAGTGCTGCTCagGCTGGTGGGCGTCCTCGGGCAGCACGGCCAGTGTTTGTCAGAGCTGTGCGAGCTGTGTGAGGCGTCGTGCTCGCCCTCCGCCCTGGTCAGACTGCTGCAGTACTACAGCAGCTGGGCTCAGCTCCGAGACACTCTCATCCCCAACTGGACACCGCTGGGTGTGGTGGCTGTAGCCGTCTCTGAAGACTGCTCTCTCTACTCCCTTATGCTCAAAGTCCTACCAGCCCTCGCCatggGCAACTCCGTGGTCGTCGTCGTCCCTGGTCGGAGCAGCGCCCCTCCAGCGCTCCTCTTGGCCCAGCTTTTCGTGGGAGCAGGACTTCCCGCCGGGGCTCTTAATGTcttaacaggaagtgacatgtCGCTGGGGGCCAAAGTGGCACAGAACCCCAGCATCAGCTACGTCACCTACAGCGGCAACAGGCAGGATGGGGTGACGCTGTGTAAGGCCACAGCAGGGATGGGCGTTCccgtttctgtctcccccaacATCGGCGCTACGTGTCCCTTCATCATCTTTGAGTCAGCCGACATCGACAGCGCAGTGGACGCAGTGATAGAGGCTGCCTtcaagaagaaaagagagGTCCACTGGGTGTTGTGCGTGCAGGAGAGCGTGCTGGACAGTGTCGTGGCCCGTCTCAGGCTCCGTATGGCAGGGATGAAGTGTGTGGCCCTGCACAGTGAGGGGGACAGGGTCCTGGTGGACACTGCAGTACAGGTCGCTCAGCAGCAGGGCGCCACGTTGGTTCAGTCCTGCGCTGCCCCCCCTTCAGGTGCTCAGTACCCTCCCACAGTGCTCTGCGGGGCGGCCCCCTCCTCTCCATTTGTGGTCAGCCCCTCCCCTGGACCACTGCTGCCACTCATGACATTCAGAAGCAACACCGAGGCAGTGACCCTGGGAAACCACAGTCCTCACGGCTATGCCGCCTCCATCTGGACTGAAGACCTCACGCTGGCTTTGGACACAGCAAAGagtCTGTCAGTCGGCTCAGTGTGGGTGAACTCCCACTCGGTGTCTGACCCGTGTCTGCCCGTCTCTGGCCACAAAGACAGCGGCACCTGCACTGACGGAGGACACGAGGGTCTGTACCAGTTTCTACGCccgtcctcttcttcctctcctctacCTCGCTCCTCCCCCGTCTCTATGGACTACTCAAAGTTTGGAACAGCGGCATCCCCCGCTATCATTCCTGATGACTCAGACCCTGCCAGCGCTCCGAAGCCCTACCTGCAGTTTGTCGGCGGTAAGCCATGTAAATCAGTGTCTGGCTGCAGCGTGGCTGTGCAGTCACCAGGGGGCGGCAGCGTGTTAGCCTATTGTCCAGATGGAGGCCGGAAAGACGTCCGTAATGCCGTGGAGGCTGCTGTCAAAGTCCAGCCTGGATGGATGAAAAAGAGTCCGTCTGCACGCGCTCAGTCACTCTACTCTCTGACCAAGGCCCTGGAGGCTAAGAGGCGGGACATAGCTGCATCAGTCAGTGTTCAGACCGGCCTCTCAATGGACGAGGCTGACACGGAGGTGGAGCTCAGCATCGCCAGGCTCAGTGATTGGGCGGCTTACTGTGACAAAAACCAAGGAGGAACTCCGcCTTTGCCACAGTCTGGCtctgctctctccctccccGAAGCCCTGGGAGTCGTGGGACTCGTCCTCCCCGACGAGAATCCCCTCCTCTCCATGGTAACGCTACTAGGGGCAGCAATCGCCGGTGGCAACGCTGTCGTCATGGTCCCCAGTCAGAAGTATCCACTACCAGCCTTGGCATTCATTCAGGTGCTCCAGGCTTCAGACCTGCCAGCAGGATTGGTAAATGTCATCACAGGGAGCAGAGACGAGCTGACAGCGGCTCTGGCTAATCACAGCGTCATCAAGGCCATCTGGTACTGGGGCAGTGCTGAGGGCTGCCAGTACCTCCAGTACACCTGCACCAGCCCTCTGAAAATCCTGCATCTGTTCTGCCAAAAGGAAGATGGAGGCAAGGACTGGACTAAGTCTCATCCCTCGCTCCTGGAAGAGATGTGGAGAAATGCCGTCCAGTGGAAGAGTGTGTGGATTCCTACTGCataaaaagacagagagggagaatgaaAGACGAAGGTGACGAGAAAGATGGAGGGGGGAAGAGTTGCAGATAtccactgtgtgtctgtggagtCAAACTATAGGATGTAGAtttaaaaaggataaaaaaaaaaagaataacggTGACCATGAAAATCA

Function

symbol description
aldh16a1 Predicted to enable oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor. Is expressed in several structures, including intermediate cell mass of mesoderm; liver; neural tube; spinal cord; and vasculature. Orthologous to human ALDH16A1 (aldehyde dehydrogenase 16 family member A1).

NR:

description
PREDICTED: aldehyde dehydrogenase family 16 member A1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825601.1 True 2541 mRNA 0.58 17 26077619 26101488

Neighbor

gene id symbol gene type direction distance location
LOC120575277 LOC102297800,LOC102193357,LOC103367484 coding upstream 67505 26003768 ~ 26010114 (+)
LOC120575039 pacrg,LOC107697704,LOC107583491,LOC107695182 coding upstream 79861 25996025 ~ 25997758 (+)
dnase1 dnase1l2 coding upstream 90833 25977292 ~ 25986786 (+)
LOC120575190 prpsap2,LOC103393631 coding upstream 199200 25864573 ~ 25878419 (+)
traf7 traf7 coding upstream 373851 25684331 ~ 25703768 (+)
LOC120575028 LOC101073513,LOC103367474,LOC104931113 coding downstream 4515 26106003 ~ 26108214 (+)
LOC120575029 LOC101073513,LOC103367474,LOC104931113 coding downstream 11671 26113159 ~ 26115434 (+)
syt5a LOC105920779,LOC103358649,LOC101481810,LOC102228091,LOC102207842 coding downstream 41047 26142535 ~ 26161155 (+)
LOC120574687 NA coding downstream 101479 26202967 ~ 26226046 (+)
LOC120575278 NA coding downstream 149355 26250843 ~ 26268502 (+)
G158187 LOC103376870 non-coding upstream 29158 26040679 ~ 26048461 (+)
LOC120574899 NA non-coding upstream 60104 26014235 ~ 26017515 (+)
G158179 NA non-coding upstream 78866 25998529 ~ 25998753 (+)
G158075 NA non-coding upstream 89293 25869170 ~ 25988326 (+)
G158064 NA non-coding upstream 347441 25638368 ~ 25730178 (+)
G158204 NA non-coding downstream 15660 26117148 ~ 26118657 (+)
G158205 NA non-coding downstream 17616 26119104 ~ 26119546 (+)
G158259 NA non-coding downstream 226703 26328191 ~ 26492312 (+)
G158245 NA non-coding downstream 239151 26340639 ~ 26344484 (+)
G158292 NA non-coding downstream 502599 26604087 ~ 26609349 (+)
G158184 NA other upstream 41455 26032304 ~ 26036164 (+)
zgc:158403 LOC103370216,LOC106932766 other upstream 674567 25383364 ~ 25403052 (+)
G158004 NA other upstream 709907 25330435 ~ 25367712 (+)
srsf2b LOC104946423,LOC101476251,LOC100695205 other upstream 874784 25197648 ~ 25202835 (+)
LOC120575219 NA other upstream 975108 25083281 ~ 25102511 (+)
G158276 NA other downstream 354150 26455638 ~ 26469767 (+)
G158291 nsf,LOC101477540,LOC102297066,LOC100697603 other downstream 474151 26575639 ~ 26628036 (+)
LOC120575279 NA other downstream 1298388 27399876 ~ 27400968 (+)
smg1 smg1 other downstream 1500305 27601793 ~ 27661623 (+)
G158612 NA other downstream 1947024 28048512 ~ 28052449 (+)

Expression


Co-expression Network