LOC120575028 (LOC101073513,LOC103367474,LOC104931113)


Basic Information

Item Value
gene id LOC120575028
gene name LOC101073513,LOC103367474,LOC104931113
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 26106003 ~ 26108214 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825612.1
TCCACTACCATTTCACAACCGGGAAGAAAGCCATTAGGAGTTCTTGCTTCAACAGTGTTTGAACGGAGCTTCTTTCTTCGTCCCGCTTTTTACTTCAACTAGTCTGCATTCCGGACACAAATAACCGCTACTACTTCAACACTACTGGAAAAGTCGACGTAAAGCTTTATTTTTGTACCGTTTTgttaagaaaaacacaaaaaaacgccAGCGAAAAATGGAGTCTCAAGTGCGTCAGAACTACCACCGCGACTGCGAGGCCGCCATCAACCGGATGGTCAACATGGAGATGTATGCCTCCTACACCTACACTTCCATGGCCTTTTACTTCTCCCGTGACGATGTGGCCCTTCCAGGCTTTGCCCACTTCTTCAAGGAGAACAGCGACGAGGAGAGGGAGCACGCCGAGAAGCTGCTGTCCTTCCAGAACAAGAGAGGAGGACGCATCTTCCTCCAGGACATCAAGAAACCGGAGCGTGATGAGTGGGGGAGCGGGCTGGAGGCCATGCAGTGCGCCCTGCAGCTGGAGAAGAAGGTCAACCAGGCTCTGCTGGACTTGCACAAATTGGCCAATGAACATGTAGACCCTCATATGTGTGACTTCCTGGAGACCCACTACCTGAACGAGCAGGTGGAGGCCATCAAGAAGCTGGGCGACTACATTACCAACCTCACCCGCATGGACGCCCAAAACAACAAGATGGCGGAGTACCTGTTTGACAAGCACACCCTTGAGAGCAAGAGCTAAACTCCTAGTCCTGAGAGCCTGGAGTGAAAATGTCAATGACACACTAAACACTGGCTTTAAACTAAACTCCTTCTTCTGCTTCAGCTGTTCAGAGTGTAACATCTAATCTTGTTAAACCTGTAAGTTGATGCATTCTCATATGTTCTGTTGGTCTTGCTGTTAAATGTCAGGTGGAAAGATGGGTGTTCATCAGGTTATGGCTTTGCCCTTATCACCTATGTATAAGCCTCCTGTGTGACCTTTTTATAACTGATTGTGACTGAATGTTTCTGATCTGTTCTTAATCGGAATAAAACCTTTTTGAGCTGGA

Function

NR:

description
PREDICTED: ferritin, middle subunit

GO:

id name namespace
GO:0006879 cellular iron ion homeostasis biological_process
GO:0006826 iron ion transport biological_process
GO:0008199 ferric iron binding molecular_function

KEGG:

id description
K00522 FTH1; ferritin heavy chain

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825612.1 True 1058 mRNA 0.48 4 26106003 26108214

Neighbor

gene id symbol gene type direction distance location
aldh16a1 aldh16a1 coding upstream 4515 26077619 ~ 26101488 (+)
LOC120575277 LOC102297800,LOC102193357,LOC103367484 coding upstream 95889 26003768 ~ 26010114 (+)
LOC120575039 pacrg,LOC107697704,LOC107583491,LOC107695182 coding upstream 108245 25996025 ~ 25997758 (+)
dnase1 dnase1l2 coding upstream 119217 25977292 ~ 25986786 (+)
LOC120575190 prpsap2,LOC103393631 coding upstream 227584 25864573 ~ 25878419 (+)
LOC120575029 LOC101073513,LOC103367474,LOC104931113 coding downstream 4945 26113159 ~ 26115434 (+)
syt5a LOC105920779,LOC103358649,LOC101481810,LOC102228091,LOC102207842 coding downstream 34321 26142535 ~ 26161155 (+)
LOC120574687 NA coding downstream 94753 26202967 ~ 26226046 (+)
LOC120575278 NA coding downstream 142629 26250843 ~ 26268502 (+)
prl LOC103358656 coding downstream 366823 26475037 ~ 26481970 (+)
G158187 LOC103376870 non-coding upstream 57542 26040679 ~ 26048461 (+)
LOC120574899 NA non-coding upstream 88488 26014235 ~ 26017515 (+)
G158179 NA non-coding upstream 107250 25998529 ~ 25998753 (+)
G158075 NA non-coding upstream 117677 25869170 ~ 25988326 (+)
G158045 NA non-coding upstream 379522 25646198 ~ 25726481 (+)
G158204 NA non-coding downstream 8934 26117148 ~ 26118657 (+)
G158205 NA non-coding downstream 10890 26119104 ~ 26119546 (+)
G158259 NA non-coding downstream 219977 26328191 ~ 26492312 (+)
G158245 NA non-coding downstream 232425 26340639 ~ 26344484 (+)
G158292 NA non-coding downstream 495873 26604087 ~ 26609349 (+)
LOC120575027 NA other upstream 14995 26089652 ~ 26091008 (+)
G158184 NA other upstream 69839 26032304 ~ 26036164 (+)
zgc:158403 LOC103370216,LOC106932766 other upstream 702951 25383364 ~ 25403052 (+)
G158004 NA other upstream 738291 25330435 ~ 25367712 (+)
srsf2b LOC104946423,LOC101476251,LOC100695205 other upstream 903168 25197648 ~ 25202835 (+)
G158276 NA other downstream 347424 26455638 ~ 26469767 (+)
G158291 nsf,LOC101477540,LOC102297066,LOC100697603 other downstream 467425 26575639 ~ 26628036 (+)
LOC120575279 NA other downstream 1291662 27399876 ~ 27400968 (+)
smg1 smg1 other downstream 1493579 27601793 ~ 27661623 (+)
G158612 NA other downstream 1940298 28048512 ~ 28052449 (+)

Expression


Co-expression Network