LOC120575029 (LOC101073513,LOC103367474,LOC104931113)


Basic Information

Item Value
gene id LOC120575029
gene name LOC101073513,LOC103367474,LOC104931113
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 26113159 ~ 26115434 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825613.1
CTCTCTTCACTCCATCTCACAACCGGGAAGAAAGCCATTAGGAGTTCTTGCTTCAACAGTGTTTGAACGGAGCTTCTTTCTTCGTCCCGCTTATTACTTCTGCATTCTGGACACAAAGAACCTCTGCTACTTGAACAATACTGGAAAAGTCGACGTAAAGCTTTATTTTTGTACCGTTTtgttaagaaaaacaaaagaaaacgccagcGAAAAATGGAGTCTCAAGTGCGTCAGAACTACCACCGCGACTGCGAGGCCGCCATCAACCGGATGGTCAACATGGAGATGTATGCCTCCTACACCTACACTTCCATGGCCTTTTACTTCTCCCGTGACGATGTGGCCCTTCCAGGCTTTGCCCACTTCTTCAAGGAGAACAGCGACGAGGAGAGGGAGCACGCCGAGAAGCTGCTGTCCTTCCAGAACAAGAGAGGAGGACGCATCTTCCTCCAGGACATCAAGAAACCGGAGCGTGATGAGTGGGGGAGCGGGCTGGAGGCCATGCAGTGCGCCCTGCAGCTGGAGAAGAAGGTCAACCAAGCTCTGCTGGACTTGCACAAAGTGGCCAATGAACATGTAGACCCTCATCTTTGTGACTTCCTGGAGACTCACTACCTGAACGAGCAGGTGGAGGCCATCAAGAAGCTGGGTGACTACATTACCAACCTCACCCGCATGGACGCCCAAAACAACAAGATGGCGGAGTACCTGTTTGACAAGCACACCCTTGAGAGCAAGAGCTAAACTCCTCCTAGTCCTGAGAGCCTGGAGTGAAAATGTCAATGACACACTAAACACTGGCTTTAAACTAAACTCATTCTTCTGCTTCAGCTGTTCGGAGTGTAACCTCTAATCTTGTTAAACCTATAAGTTGATGCATTCTCATATGTTCTGTTGGTCTTGCTGTTAAATGTCAGGTGGAAAGATGGGTGTTCATCAGGTTATGGCTTTGCCCTTATCACCTATGTATAAGCCTCCTGTTGACATTCTGACTGAAGTTTCTGATCTGTTCTTAATGTGAATAAAACTTTTTGAGCTGGA

Function

NR:

description
PREDICTED: ferritin, middle subunit

GO:

id name namespace
GO:0006879 cellular iron ion homeostasis biological_process
GO:0006826 iron ion transport biological_process
GO:0008199 ferric iron binding molecular_function

KEGG:

id description
K00522 FTH1; ferritin heavy chain

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825613.1 True 1041 mRNA 0.48 4 26113159 26115434

Neighbor

gene id symbol gene type direction distance location
LOC120575028 LOC101073513,LOC103367474,LOC104931113 coding upstream 4945 26106003 ~ 26108214 (+)
aldh16a1 aldh16a1 coding upstream 11671 26077619 ~ 26101488 (+)
LOC120575277 LOC102297800,LOC102193357,LOC103367484 coding upstream 103045 26003768 ~ 26010114 (+)
LOC120575039 pacrg,LOC107697704,LOC107583491,LOC107695182 coding upstream 115401 25996025 ~ 25997758 (+)
dnase1 dnase1l2 coding upstream 126373 25977292 ~ 25986786 (+)
syt5a LOC105920779,LOC103358649,LOC101481810,LOC102228091,LOC102207842 coding downstream 27101 26142535 ~ 26161155 (+)
LOC120574687 NA coding downstream 87533 26202967 ~ 26226046 (+)
LOC120575278 NA coding downstream 135409 26250843 ~ 26268502 (+)
prl LOC103358656 coding downstream 359603 26475037 ~ 26481970 (+)
LOC120574712 LOC102077703,LOC102789758,LOC102295644,LOC101478841,LOC107104997 coding downstream 368703 26484137 ~ 26489689 (+)
G158187 LOC103376870 non-coding upstream 64698 26040679 ~ 26048461 (+)
LOC120574899 NA non-coding upstream 95644 26014235 ~ 26017515 (+)
G158179 NA non-coding upstream 114406 25998529 ~ 25998753 (+)
G158075 NA non-coding upstream 124833 25869170 ~ 25988326 (+)
G158045 NA non-coding upstream 386678 25646198 ~ 25726481 (+)
G158204 NA non-coding downstream 1714 26117148 ~ 26118657 (+)
G158205 NA non-coding downstream 3670 26119104 ~ 26119546 (+)
G158259 NA non-coding downstream 212757 26328191 ~ 26492312 (+)
G158245 NA non-coding downstream 225205 26340639 ~ 26344484 (+)
G158292 NA non-coding downstream 488653 26604087 ~ 26609349 (+)
LOC120575027 NA other upstream 22151 26089652 ~ 26091008 (+)
G158184 NA other upstream 76995 26032304 ~ 26036164 (+)
zgc:158403 LOC103370216,LOC106932766 other upstream 710107 25383364 ~ 25403052 (+)
G158004 NA other upstream 745447 25330435 ~ 25367712 (+)
srsf2b LOC104946423,LOC101476251,LOC100695205 other upstream 910324 25197648 ~ 25202835 (+)
G158276 NA other downstream 340204 26455638 ~ 26469767 (+)
G158291 nsf,LOC101477540,LOC102297066,LOC100697603 other downstream 460205 26575639 ~ 26628036 (+)
LOC120575279 NA other downstream 1284442 27399876 ~ 27400968 (+)
smg1 smg1 other downstream 1486359 27601793 ~ 27661623 (+)
G158612 NA other downstream 1933078 28048512 ~ 28052449 (+)

Expression


Co-expression Network