LOC120574035


Basic Information

Item Value
gene id LOC120574035
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 6709402 ~ 6711199 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641813.1
CGGGAACTGACATGAATTGACCTCTGGCAGTTAAGGAGCAACAttattcatttggagtcgtgtttctggccTCCCTGgagaatCTGTACAGCGGGTGAGGGTCAGCCACCTCCAACCCCTCCCCACTGCCTCCATTCCTACTGCCCAGCTGTTTGTGTCCTGCTTCCCAATGCTCCAAGGCAGGCTGACCAGAAAAGTGAATCGTGGATGGAGAGATTCTGCTTTGGAATAACCTAAGGAGGAGAGGAATGATGGAGGGATAATACTgtggaggaagagaaaaaaaacaaaggtacacaatacacacaatacGCACCCATTGGACCAatgggtgtgtgttgtgtggagcAGGCATGACACTTGATGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641813.1 True 368 lncRNA 0.50 3 6709402 6711199

Neighbor

gene id symbol gene type direction distance location
myo15aa myo15a,LOC102214943,LOC103147438 coding downstream 11015 6650829 ~ 6698387 (-)
llgl1 llgl1,LOC102796592 coding downstream 60143 6607284 ~ 6649259 (-)
desi1a LOC102210395,LOC104922913,LOC103361812,LOC102293927,LOC100707393 coding downstream 124377 6576144 ~ 6585025 (-)
ccdc97 NA coding downstream 359138 6345320 ~ 6350264 (-)
baiap2l2a NA coding downstream 464983 6229363 ~ 6244419 (-)
drg2 drg2,LOC107720047,LOC107674714 coding upstream 425 6711624 ~ 6718897 (-)
znf598 LOC101064755,LOC105416421,LOC103147408,LOC106595880,LOC104962932 coding upstream 26912 6738111 ~ 6748409 (-)
slc25a17 slc25a17,LOC104965902,LOC102798647 coding upstream 39067 6750266 ~ 6756280 (-)
rpusd1 rpusd1 coding upstream 47061 6758260 ~ 6766315 (-)
clcn7 clcn7 coding upstream 103477 6814676 ~ 6831673 (-)
G152560 flii non-coding downstream 110526 6597999 ~ 6598876 (-)
G152559 flii,LOC102796290 non-coding downstream 111559 6597354 ~ 6597843 (-)
G152548 NA non-coding downstream 281166 6427328 ~ 6428236 (-)
G152497 NA non-coding downstream 317804 6387165 ~ 6391598 (-)
G152495 NA non-coding downstream 328211 6380875 ~ 6381191 (-)
G152577 NA non-coding upstream 45592 6756791 ~ 6757085 (-)
G152720 NA non-coding upstream 302048 7013247 ~ 7013685 (-)
G152712 NA non-coding upstream 310270 7021469 ~ 7038559 (-)
G152730 NA non-coding upstream 489488 7200687 ~ 7200912 (-)
G152729 socs1,LOC100174889 non-coding upstream 493115 7204314 ~ 7206094 (-)
G152441 LOC104944083,LOC103371237,LOC107087166,LOC105933549,LOC100701083,LOC101478422 other downstream 481288 6182408 ~ 6228114 (-)
LOC120574101 NA other downstream 714213 5991937 ~ 5995189 (-)
atp5mf atp5j2,LOC102786280 other downstream 1095680 5574680 ~ 5613722 (-)
bud31 bud31,LOC106595689 other downstream 1126538 5580263 ~ 5582864 (-)
top3a top3a,LOC102783137 other downstream 1141863 5549291 ~ 5567539 (-)
G152567 NA other upstream 8585 6719784 ~ 6720643 (-)
arhgdig NA other upstream 61681 6772880 ~ 6801536 (-)
grin2aa grin2a,LOC102780805 other upstream 858519 7569718 ~ 7723914 (-)
LOC120574885 LOC103375378,LOC104925605,LOC104966930 other upstream 1370939 8082138 ~ 8100398 (-)
G152952 NA other upstream 1729980 8441179 ~ 8444381 (-)

Expression


Co-expression Network