LOC120575613 (LOC103357740,LOC104968174)


Basic Information

Item Value
gene id LOC120575613
gene name LOC103357740,LOC104968174
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 25839404 ~ 25846377 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU228842
TCTAGACATAAATTCATTGCAATTTTTCTACTTGTGCTGGTAACTacgtttttttatgtttcaaatGTGCAGCTTAAGTATTCAAACAAGGACTGGACCTGGACCAAGAACCAACGCAACTTAGCATACAAGAGGTATAGCTCAGCAAATATGGAGGGCACGCTTACTCGTCAACAAAAATATGAAGCCCAAGGGTTTTCCTGCTCTGTGGCACCACAGTACTGGACCTGGGGAAACCATATGAATGACTGCAAGATTTCTTTTCAAGAGGGAGAAGTTCCTCACTCATGGACTCCAAAGTACACTCAGCCTCATTCTAAAGCACCAGACTACCAGCACAATGTGTACATACCTGGCACCCCGTCTGACTACAGCACTCTGAAGCTGGCACCCAGAGGAGAACTGGATGTGTACAACACTTTCTCTAcgtttgggaaaaaaaagagattcaCGTCAAACTATGAACAATCTTTTGACAACGATGATGGTCTCATCGTAAGTAATGACATGTTCAAATGATACATcaactatactgtatattctgtgTTTAATATATGCCATTAACTAGTTCCATTAAAAAACTATAATTTGCTTCTTGGAGGCTGACAGACTATGTTTCCCCTTGTTTCCAGTGGGATTAAATAACACTCCGTACCAcaagtatatttttatttttgtaaatactgaaataaagtAAAGTATATTTTGAGTCATGGTAGAATCAAGTGATGACTTTCTCCATCATGAAGTTGTATTGTAGAAAGGCAGTAAACTGGAGCACTACAGAGAAGGCCTTTCGTTTGCAGCAGCAGTGAGCTCAGGTAAATGTGAGTTGATCTGTTTGGAGGCTGCAGAGTTAATGTCTAACTTTAAAAAGGTGTTCACAATGTCAGCAGCTTACAGTCTATTACACAAGGGGTGTCCATGTACCTTGTACTTACTTTTATGtagacacacattttttttgtcttatagGACACATGTTGTGTGTCAAAATTGTGAACCAACTGTACTAACCAGAGAGTTTATACTTGTATTAATGCTACAACAATCTTTGTGGGCGTTAGTTTTCACAAATGCTGTAAATCTTGGTTGGATGATGAAGCAGTGCCACAGTTACAGTTGTATCTTAAGTTCAAAGTCTTTCATCCAATCCTGCCTGGTGCATTTAGTGACAGGACATTTGTTCTGTACATGTCTGAATGCAGTCCAGGAACAATGCACAAGCGATGCCAACAGATGGTAAAGGTAATACAATAGAAAAGAGACCCAATGGCAAATGCATCAGATTTCCAATTATGACATTGAAATGAGTGTAACCATACAACATCTCCTTCAACGAGGGTTAATTGAGGAATTGTGTTACAAGGAATAGCATCACAGCTGGGATTTTACTCACTGGGCCTGTGCAGTAGACCGTTACACTGACACACCACATCCAATTGCCTGTTGGACCACTCAGATTGTTTGATCACAAGCAACTGCGGACACAATGCAGTCACTGGTTATATGCATTCCAAATTTGTATTTATCATTGAGTGTGATTGCACAGGTATGCTTAGTTAGTTACTTAGTTATTACTCTGTATATAgtctatgtacagtatatattaatATCAATAAATCTGTCCtcaactctgttttttttttgtttttttgacagcCATACTTATATTCCTCTCATTGGTGGATGTGCTGAAATATTGTGTTTATGTGGCTCTGAAATAATTGTACTATAACTTAATATAActtatatatactgtaagtaTAACTCCATAAATTCATTAATTTTATtgtgaataaatgaatacattaaaACAGGAAAGCAGTA
>XM_039826414.1
GAGAAATTGAATCAAGTACGTTTGACCTACGGCCAAAGCCTCGAGACTGCTACATGAATTTGATCGGGCTAGTAGGCAGGAAAGATTATCCGAGCAGATGTCGTTTCTCTCCTATTGGAACAGTAGGGccaataataaacacacacgcacactaatCTGAGATAGGTCTAGTAGCCCCTGCAcacccctttctctctcctctcttttctctcggGCAGACAGTCGCTGTTCCAGTCCCACCAATGTCAAGTTTTTTCCAGATTGTATTTTGCACAATTCTGGCTTAATCATCTTCTATGACTACACCAGAGACGTAGTCCTTGGTGTGAGTGTGCGGCATTGCTTTAGCCTACAGATGGACACACAAGGGGCGAAGAAAAGACTGTATGGGAAATGGCATGTAGTTTGCCGTTTTGCGTTGTTCACTTGTTTCTTGGATGCAGTCCGGGGACAGCTTCGCTACTCAATCCCTGAAGAACTGGAACATGGAGCGTTTGTTGGCAATATTGCAGAGGACCTGGGCTTGGATTTGGACAAGCTCTCTGCGCGCAGATTCCGGATAGTCTCAGGTGCCAAGAAGCAATATGTGGAGGTAAATTTAGAAAATGGAGTTGTATTTGTCAATGAAAGAATTGACCGTGAAGAACTATGCGAGCAGAGTTTGTCCTGTTCTTTTCACTTGCAAGTGGTCATAGAAAACCCTCTGGAGCTGTACAGGGTGGAGATGGAAATTCTGGACGTGAACGATAACTCTCCTAGTTTCCCGTGGACCGAGTTTAATCTGGACATATCGGAGTCCGCTGCGCCAGGATCCCGTTTCCCACTTGAGAGCGCACAGGACTTAGATGTCGGATCCAACTCACTCCGCACCTATTTGTTAAGTGTAAATGAGCATTTCCTTTTGGATATACAGACGCGCAGTGACGGCAGCAAATTTGCAGAACTAGTCCTACAAAACCAACTggacagagagcagcagagtaCGCACCAAATGGTCCTAACGGCGGTGGATGGAGGCGCGCCGGAGAGATCCGGCACTGCGCAAATTGATATCACCGTCTTGGATGCAAATGATAACGCGCCTGTGTTTGATCAGTCGTTTTACAGAGTGAGGCTTGCTGAAAACGCACCTAAAGGAACAGTTGTCATAAAACTCAATGCGTCCGATTTAGATGAGGGTCCCAATGCTGACATCACCTACTCATTCAGTGGCCACGCTCCTATTAAAGTGCGCCAGCTCTTCAGCGTAGACTCGCGCACGGGGGAAATCAAAGTCAAAGGAGTGATAGACTATGAAAAAGCCAGGATGTATGAAATTTATGTTCAGGCTAAAGACAAAGGCCCCTCCGCTGTAGCAGTTCACTGCAAAGTGCTGGTGAACGTTTTGGATAAAAACGACAACCTCCCAGAGGTGATCCTGACATCAGTGTCAACACCTGTGCAGGAGGACGCGCCCCCGGGAACGGTGATAGCCGTCATCAGCGTAATGGACAAAGACTCAGGTGAAAACGGGAATGTGGACTGTGAGATCCCCCATCACGTCCCATTCCAGCTCCACTCATCCTTTAAAAACTACTATACATTAGTTACTTGTGATTTTCTGGACAGAGAGGCAGTGGCAGAGTACAACATCACCCTTACCGCCCGAGACATGGGCTCCCCACCTTTATTCACTAGGAAAACTATTTTGGTCCAAGTGTCTGATGTGAATGATAACGCGCCTCACTTCAAACAGCCTTCCTATACTGTGTATTTGACTGAGAATAATGCGCCGGGAGCATCCATTTGCTCGGTGACTGCACTGGATCCAGATTCTGGTCAAAATGCATATCTCTCCTATTCGTTACTGGACGGTGACATACAGGGAATGCCCGTGTCCACATACGTGTCTATAAACTCGGACAACGGGAATATTTACGCGCTGCGATCCTTTGACCACGAACAACTTAAAAACTTTCAGATCACAGTTCAAGCTCAAGACGCCGGTTTCCCGCCTCTGAACAACAACGTTTCAGTGAACATATTCATTTTGGACCAAAACGACAATGCGCCTGTAATTGTGTCACCAGTTCCGCAAAACGGCACAGCACCCAGCGAACCAGTGCCCAGATCTGTGGACGCCGGCTACCTTGTCGCCAGAATCAGCGCGGTTGACGCAGACGCAGGTCAAAACTCGCGTCTTTTTTATCATATGCTCCAAGCAACTGACCCGAGCTTGTTCAGCATTGCTCTGTACACAGGCGAAATCAGGACAATACGCCACTTGATGGAGAAAGACCCCACGAGGCACATATTGGTCATTCTTGTGAAGGACAATGGTCAGCCGCCCCTCTCGGCCACTGTTTCCATCATTCTGTCTGTGGTTGACAGCCTGCCAGATTCGCAGCCCGATTTGGCTGACCTGTCACTAAGCCCGCATCACAGCTCCAACTTCACCCTGTACTTAATCGTGTCTCTGGGCGCAATCTCCTTCACATTTCTTGTGGCTATTATTGTCCTGGTTGCAGTGCGGAGACTGAAGGGCAGAGCATCCAGCGGAGAGTCCAACTTCCCCACCATTATCggatgttgttgctgctgctgctcccgcTCAGAAGCCTCCAACAGCACAGAGGTGTTCAAAAAGTCCAACTTAAATGTTTGTATGTCCACAGGCGCGTCCGGCTGCGCAGAGGCAACAAACAGCAACGGCGCACTTCCTCAGGTCTATTGCTACAAAATGTGTCTGACACCGGAATCGTCCAAAAGTGACTTCATGTTCCTCAAGCCTTGCAGTCCTGTAATGTCAGTTCAGCAGAATAACGCCAAGAGCACAGATTACCTCACTTCTGGCTGGAGCGCACTGGACCGTAACGACCTGGCCAACAACAGAGCAGCAACCCCAAACGAGCTTAAGTATTCAAACAAGGACTGGACCTGGACCAAGAACCAACGCAACTTAGCATACAAGAGGTATAGCTCAGCAAATATGGAGGGCACGCTTACTCGTCAACAAAAATATGAAGCCCAAGGGTTTTCCTGCTCTGTGGCACCACAGTACTGGACCTGGGGAAACCATATGAATGACTGCAAGATTTCTTTTCAAGAGGGAGAAGTTCCTCACTCATGGACTCCAAAGTACACTCAGCCTCATTCTAAAGCACCAGACTACCAGCACAATGTGTACATACCTGGCACCCCGTCTGACTACAGCACTCTGAAGCTGGCACCCAGAGGAGAACTGGATGTGTACAACACTTTCTCTAcgtttgggaaaaaaaagagattcaCGTCAAACTATGAACAATCTTTTGACAACGATGATGGTCTCATCGTAAGTAATGACATGTTCAAATGATACATcaactatactgtatattctgtgTTTAATATATGCCATTAACTAGTTCCATTAAAAAACTATAATTTGCTTCTTGGAGGCTGACAGACTATGTTTCCCCTTGTTTCCAGTGGGATTAAATAACACTCCGTACCAcaagtatatttttatttttgtaaatactgaaataaagtAAAGTATATTTTGAGTCATGGTAGAATCAAGTGATGACTTTCTCCATCATGAAGTTGTATTGTAGAAAGGCAGTAAACTGGAGCACTACAGAGAAGGCCTTTCGTTTGCAGCAGCAGTGAGCTCAGGTAAATGTGAGTTGATCTGTTTGGAGGCTGCAGAGTTAATGTCTAACTTTAAAAAGGTGTTCACAATGTCAGCAGCTTACAGTCTATTACACAAGGGGTGTCCATGTACCTTGTACTTACTTTTATGtagacacacattttttttgtcttatagGACACATGTTGTGTGTCAAAATTGTGAACCAACTGTACTAACCAGAGAGTTTATACTTGTATTAATGCTACAACAATCTTTGTGGGCGTTAGTTTTCACAAATGCTGTAAATCTTGGTTGGATGATGAAGCAGTGCCACAGTTACAGTTGTATCTTAAGTTCAAAGTCTTTCATCCAATCCTGCCTGGTGCATTTAGTGACAGGACATTTGTTCTGTACATGTCTGAATGCAGTCCAGGAACAATGCACAAGCGATGCCAACAGATGGTAAAGGTAATACAATAGAAAAGAGACCCAATGGCAAATGCATCAGATTTCCAATTATGACATTGAAATGAGTGTAACCATACAACATCTCCTTCAACGAGGGTTAATTGAGGAATTGTGTTACAAGGAATAGCATCACAGCTGGGATTTTACTCACTGGGCCTGTGCAGTAGACCGTTACACTGACACACCACATCCAATTGCCTGTTGGACCACTCAGATTGTTTGATCACAAGCAACTGCGGACACAATGCAGTCACTGGTTATATGCATTCCAAATTTGTATTTATCATTGAGTGTGATTGCACAGGTATGCTTAGTTAGTTACTTAGTTATTACTCTGTATATAgtctatgtacagtatatattaatATCAATAAATCTGTCCtcaactctg

Function

NR:

description
PREDICTED: protocadherin-10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228842 False 1830 lncRNA 0.38 3 25844089 25846377
XM_039826414.1 True 4457 mRNA 0.46 4 25839404 25846186

Neighbor

gene id symbol gene type direction distance location
LOC120544417 NA coding upstream 430667 25316741 ~ 25408737 (+)
LOC120543567 LOC104950804,LOC103373327 coding upstream 620032 25214909 ~ 25219372 (+)
sez6a LOC101482153,LOC102209856,LOC102794455,LOC103373328 coding upstream 663000 25082924 ~ 25176404 (+)
LOC120544010 LOC103359318,LOC102303247,LOC102209186,LOC102794923,LOC100703358 coding upstream 786855 24989620 ~ 25052549 (+)
nufip2 nufip2 coding upstream 1209939 24620467 ~ 24629465 (+)
LOC120575614 LOC103357741 coding downstream 3943 25850320 ~ 25859087 (+)
hrh2b LOC104968172,LOC103357747,LOC102792011,LOC104946893,LOC103357743 coding downstream 52086 25898463 ~ 25929228 (+)
kcnip1b LOC103363037,LOC101476742,LOC107386610,LOC102788752,LOC101158298,LOC104941268,LOC106950639 coding downstream 96211 25942588 ~ 25966303 (+)
npm1a LOC101479348 coding downstream 121549 25967926 ~ 25976458 (+)
kdm6bb LOC105024598,LOC105902372 coding downstream 322916 26169293 ~ 26197551 (+)
G168757 NA non-coding upstream 20927 25818256 ~ 25818477 (+)
G168756 NA non-coding upstream 86336 25752863 ~ 25753068 (+)
G168747 NA non-coding upstream 191119 25648082 ~ 25648285 (+)
G168746 LOC108233889,LOC103357738,LOC107386602,LOC103394754,LOC100701475 non-coding upstream 211674 25623746 ~ 25627730 (+)
G168672 NA non-coding upstream 601432 25234475 ~ 25237972 (+)
G168760 NA non-coding downstream 781 25847158 ~ 25847638 (+)
G168769 NA non-coding downstream 132207 25978584 ~ 25980307 (+)
G168819 LOC101077796 non-coding downstream 367752 26214129 ~ 26218118 (+)
G168821 NA non-coding downstream 371808 26218185 ~ 26220863 (+)
G168860 NA non-coding downstream 421859 26268236 ~ 26270132 (+)
LOC120544202 LOC104958513,LOC101062417,LOC108233857,LOC103359319 other upstream 850015 24986465 ~ 24989389 (+)
gab3 NA other upstream 1419059 24410305 ~ 24420345 (+)
G168226 thoc2 other upstream 1910923 23927342 ~ 23928481 (+)
gria3a gria3,LOC103367234,LOC103395443,LOC102795589,LOC101486592 other upstream 1920927 23841533 ~ 23918477 (+)
zgc:163098 LOC103353302,LOC100691810,LOC102795692 other upstream 3193578 22621393 ~ 22645826 (+)
LOC120543603 LOC103357742,LOC104968170 other downstream 21777 25868154 ~ 25892531 (+)
nlgn2b nlgn2b,LOC104920019,LOC101475673,LOC100709892,LOC102787387 other downstream 153686 26000063 ~ 26223445 (+)
LOC120544064 tmem164 other downstream 697419 26543796 ~ 26568500 (+)
esrra esrra,LOC103363365,LOC100707827,LOC104926321,LOC106534575 other downstream 812981 26659358 ~ 26675795 (+)
banf1 banf1,LOC106523121,LOC104926323,LOC108233898 other downstream 835159 26681536 ~ 26687263 (+)

Expression


Co-expression Network