G168774


Basic Information

Item Value
gene id G168774
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 25880884 ~ 25915379 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU228869
CCCTGATTGGTCGACACACTCAGCCCACTGAATTCAAGAAGTGAAAATGGCCGGTCTTAACTGCAAATTGATACCTCTCCATACAAAAATAGGACTCAATAACCGTTCAGTTGTGGATGTATCAATCTGGAGTTATTGAGCAAAGTCTGTGCAACGATACTGAAGTTCCAGGCTAGGTTACAAAGCTTCTGGAAGACCTAGAATCGCTCTTTGAAAGGCCCAGAGAAGCCCTTTTTGAAAGGCCCAGAGAAGCCCTCTTTGAAAGGCCCAGAGAAACTGCAGTTGCAGGCTGGATGAAGAAACTTCTAAAACAGACTTGCGATCGCATGGAAGACCTCATTGACAGGCGCATTTATCttctaataaaaaaaGGCCGGCGTCATGGCGAATAGAAATGATGGCTGGGGATCCAGGGATGATGAAGGCTTCCGGAGGAATCTCTCCGGGCTTCAGGGGCTGAGGAGGGCAATAGCCCTGTCCAGCGGCGCCATATCTGAAGTGCCAGCTGTTGCTGTCGACTCCAGCGCCCACTGGGGGTGAGAGTTCACCACCATCTCCATCTACACAGCAAACTGGCACAGAGATACTGGGAACTGGTACAGCTTGGATCTCGAACAATTTCCCAGCTCTCTTTTCCACCGAGGGAAAAGCTGACAGACAGCAAGACATACTGTCACTGACTCGCCGATTGATTGACTGTGATGCGACTCCTCACCCTCAAGACCTCTACCTATGTTCTAATTCCTGCAGCTAGACAGAAAATCAATGCATGGAAGCTTggctggagggaggagggaacaGCTCACAATGTTCCATATGCTGCTTCGAAAGTCAAAGTTTCAAAAGTTTTCAAGTCAACTGACAAAAGCTGTTAGACATCAGCCCTGAGCCAGTGTTTCTGTGAAGCACAGGTCATTTTCGAGGCCAGTTCTACTTACAATGATGTTGTGTTGCTAAAATTCTTAATGTCGACTCCCACTCAGGACAACTCATTTcttattaaaaaacatttgcCTTTTTCAGTCTGTGGATCTCCATTCAGCCAGCTGCTTTTATGGAAGGATGCAGTTGCTTATCTGTGGCTCTGCATAAGGGCCCAAGGCTTTTGGCACCTCGGCTAAGCTCTGTATGCACATCACACTGGAATTTAAGATAATTGTAGATATTCAAAGCACAAATCTGTCAAATCCCCTGTTTTACCATGTTGTCTGAaccaaagtaaaaacaaaaatgaattcaatgtattaaatataatttaatccATTGGACAAATTTGAATGTGTAATTGTAATGGGCATTTAGTTGTGGAGGAGAAGTGATACTTGAATTAAACTAAAATGAGTGATTGTTAAGCCACTCATGTGGCTTGCCCTATGGGACTCACATCTGTAAATATTGCCCTAGATATCGgcaattaaaggaatagttcagcaTTTTGGCAAATGCGCTTATTCACTTTGTTGCAATGATATTGAGATGAATGATACCACTTTTATGTCTGCACGATAAAAACAGTATAGAGCCATGAGACGGTTAGCTTAGCAAAACGTAGGGGGAATAAGCTAGCATGGCTCTGTTCAatggtaaaaacaaacaaacattggcTAGTACCTACTAGCACCTCTACAGCTCACTAAATAACACTATATTTTGTTTCTTTAATCCGTACATTGTAACCTTTAGACTGCAACTTCCTATTTTTACACTTTGGATTTGGTatagattaaacaaatgagatataacGTGCtgaggctagctgttttcccctaCTTCCAGTctatatgctaagctaagcttacTGTCTCTAGCATAATCTCTAGCATACAGGCATGAGAGTTGAATCATTCTCTCATCTAGCCCTCAGCAAGAAAACGAacaagcgtatttcccaaaaagtTGAACCAGTTAACCATTCCAGTTAACTCTGTTAACTATTCCTTAGTTAATCAGacaaattgtttaaaatgtaaagcAAGTTATAAAACAAGAGCATAGAGTTTGAGTGACCTATATCGGGATGTTAGATGCTGGGATGTCCAATGAGAAGTGTGCGCCTgtgtaaaatgaataaatgcagaaaatactGTACTCAGGGTCTTTTGATTGAATAAAGGATCTTATTATT
>TU228870
CCCTGATTGGTCGACACACTCAGCCCACTGAATTCAAGAAGTGAAAATGGCCGGTCTTAACTGCAAATTGATACCTCTCCATACAAAAATAGGACTCAATAACCGTTCAGTTGTGGATGTATCAATCTGGAGTTATTGAGCAAAGTCTGTGCAACGATACTGAAGTTCCAGGCTAGGTTACAAAGCTTCTGGAAGACCTAGAATCGCTCTTTGAAAGGCCCAGAGAAGCCCTTTTTGAAAGGCCCAGAGAAGCCCTCTTTGAAAGGCCCAGAGGTTAGCCTTCAGGCTAAACAAACAGAACCATGCTATCTTAAAGCGATGCCGAGATATCGGAGATTACATAATTTAGGTGATTTATGGATTCATCATCATGGATTTATTGTGACATTACAGAAACTGCAGTTGCAGGCTGGATGAAGAAACTTCTAAAACAGACTTGCGATCGCATGGAAGACCTCATTGACAGGCGCATTTATCttctaataaaaaaaGGCCGGCGTCATGGCGAATAGAAATGATGGCTGGGGATCCAGGGATGATGAAGGCTTCCGGAGGAATCTCTCCGGGCTTCAGGGGCTGAGGAGGGCAATAGCCCTGTCCAGCGGCGCCATATCTGAAGTGCCAGCTGTTGCTGTCGACTCCAGCGCCCACTGGGGGTGAGAGTTCACCACCATCTCCATCTACACAGCAAACTGGCACAGAGATACTGGGAACTGGTACAGCTTGGATCTCGAACAATTTCCCAGCTCTCTTTTCCACCGAGGGAAAAGCTGACAGACAGCAAGACATACTGTCACTGACTCGCCGATTGATTGACTGTGATGCGACTCCTCACCCTCAAGACCTCTACCTATGTTCTAATTCCTGCAGCTAGACAGAAAATCAATGCATGGAAGCTTggctggagggaggagggaacaGCTCACAATGTTCCATATGCTGCTTCGAAAGTCAAAGTTTCAAAAGTTTTCAAGTCAACTGACAAAAGCTGTTAGACATCAGCCCTGAGCCAGTGTTTCTGTGAAGCACAGGTCATTTTCGAGGCCAGTTCTACTTACAATGATGTTGTGTTGCTAAAATTCTTAATGTCGACTCCCACTCAGGACAACTCATTTcttattaaaaaacatttgcCTTTTTCAGTCTGTGGATCTCCATTCAGCCAGCTGCTTTTATGGAAGGATGCAGTTGCTTATCTGTGGCTCTGCATAAGGGCCCAAGGCTTTTGGCACCTCGGCTAAGCTCTGTATGCACATCACACTGGAATTTAAGATAATTGTAGATATTCAAAGCACAAATCTGTCAAATCCCCTGTTTTACCATGTTGTCTGAaccaaagtaaaaacaaaaatgaattcaatgtattaaatataatttaatccATTGGACAAATTTGAATGTGTAATTGTAATGGGCATTTAGTTGTGGAGGAGAAGTGATACTTGAATTAAACTAAAATGAGTGATTGTTAAGCCACTCATGTGGCTTGCCCTATGGGACTCACATCTGTAAATATTGCCCTAGATATCGgcaattaaaggaatagttcagcaTTTTGGCAAATGCGCTTATTCACTTTGTTGCAATGATATTGAGATGAATGATACCACTTTTATGTCTGCACGATAAAAACAGTATAGAGCCATGAGACGGTTAGCTTAGCAAAACGTAGGGGGAATAAGCTAGCATGGCTCTGTTCAatggtaaaaacaaacaaacattggcTAGTACCTACTAGCACCTCTACAGCTCACTAAATAACACTATATTTTGTTTCTTTAATCCGTACATTGTAACCTTTAGACTGCAACTTCCTATTTTTACACTTTGGATTTGGTatagattaaacaaatgagatataacGTGCtgaggctagctgttttcccctaCTTCCAGTctatatgctaagctaagcttacTGTCTCTAGCATAATCTCTAGCATACAGGCATGAGAGTTGAATCATTCTCTCATCTAGCCCTCAGCAAGAAAACGAacaagcgtatttcccaaaaagtTGAACCAGTTAACCATTCCAGTTAACTCTGTTAACTATTCCTTAGTTAATCAGacaaattgtttaaaatgtaaagcAAGTTATAAAACAAGAGCATAGAGTTTGAGTGACCTATATCGGGATGTTAGATGCTGGGATGTCCAATGAGAAGTGTGCGCCTgtgtaaaatgaataaatgcagaaaatactGTACTCAGGGTCTTTTGATTGAATAAAGGATCTTATTATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228869 False 2125 lncRNA 0.42 4 25880884 25915379
TU228870 True 2245 lncRNA 0.42 3 25880884 25915379

Neighbor

gene id symbol gene type direction distance location
LOC120544470 LOC103357746,LOC104954804 coding downstream 368528 25425509 ~ 25512356 (-)
LOC120544428 LOC104955023,LOC103370384 coding downstream 572561 25300564 ~ 25308323 (-)
LOC120575594 NA coding downstream 600925 25272811 ~ 25279959 (-)
LOC120543755 NA coding downstream 611426 25234466 ~ 25269458 (-)
vezf1a vezf1,LOC103359320 coding downstream 896753 24967825 ~ 24984131 (-)
LOC120544034 cldn7,LOC104920020,LOC106510789 coding upstream 63848 25979227 ~ 25983358 (-)
LOC120543604 NA coding upstream 69934 25985313 ~ 25998490 (-)
fgf11b LOC103363034,LOC101476161,LOC102787886 coding upstream 87346 26002725 ~ 26052219 (-)
LOC120544213 LOC104942368,LOC103363032,LOC106949254,LOC108233826,LOC103475896 coding upstream 246486 26161865 ~ 26163707 (-)
pcolcea LOC103363028 coding upstream 298735 26214114 ~ 26220720 (-)
G168779 LOC103357740,LOC102196465 non-coding downstream 36542 25841925 ~ 25844342 (-)
G168778 NA non-coding downstream 42025 25838653 ~ 25838859 (-)
G168776 NA non-coding downstream 62391 25818279 ~ 25818493 (-)
G168775 NA non-coding downstream 78742 25801790 ~ 25802142 (-)
G168754 NA non-coding downstream 202659 25677877 ~ 25678225 (-)
G168800 NA non-coding upstream 56962 25972341 ~ 25976457 (-)
G168856 tmem88,LOC104942396,LOC103394747,LOC105024597 non-coding upstream 286248 26201627 ~ 26203804 (-)
G168876 NA non-coding upstream 367475 26282854 ~ 26283182 (-)
G168907 NA non-coding upstream 614328 26529707 ~ 26532499 (-)
G168928 NA non-coding upstream 680514 26595893 ~ 26597634 (-)
pcdh1a LOC103357738,LOC108233889,LOC101479736,LOC102299879 other downstream 157666 25623735 ~ 25723218 (-)
LOC120544362 msi2,LOC103475888 other downstream 976031 24655803 ~ 24904853 (-)
LOC120543987 NA other downstream 1384302 24490560 ~ 24496582 (-)
radx LOC103366308,LOC106923634,LOC103133962,LOC106955728 other downstream 1475007 24395776 ~ 24405877 (-)
LOC120544713 LOC104954531 other downstream 1904563 23974554 ~ 23976321 (-)
vamp2 vamp2,mpp1,LOC103367795,LOC104941032,LOC107742350,LOC107720682,LOC107082578,LOC107386619 other upstream 309440 26224819 ~ 26236194 (-)
ammecr1 ammecr1 other upstream 659550 26574929 ~ 26612717 (-)
G168964 NA other upstream 766135 26681514 ~ 26684956 (-)
gng3 gng3,LOC107559409 other upstream 773500 26688879 ~ 26693041 (-)
flrt1a flrt1,LOC104926332,LOC103360355 other upstream 955171 26870550 ~ 26941207 (-)

Expression


Co-expression Network