LOC120543978 (fez1)


Basic Information

Item Value
gene id LOC120543978
gene name fez1
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 32443286 ~ 32491305 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU231185
CCGCCACTAGGCGGAGACATTGACCAGTGAACGGCAAAGTGAACTCTAAACTAACATTAAGTTTTTCTAATTGAAATATGTGGCTCCAGATGACCTCTTCTGTCATCAGTCTGCACCTGCTACATATTATTGGAGTGCCAGCCAGGAGGGACTGAAGGAACAGAAGAGTGTCCCAGTCCTTACTTCGAACCCAGTCCAGAAATTCCAGATCAGCGTGATTAAGTCCAAAGAGGAAAACATGGAGCAGCTCCAGGATGAAGTCAGCTCAGTGCTGTGGTCAATGGGAAAGCCTGAACTCATAAAGGGCGTCATCAACTAAAGTGTAGTGAACCATCAGGGGAAGGATTCCAAGGCTTATCCTGTTGTGCCCCGAGTCGTCTGGCATCAGATGGAGCTTTTCTAGTTGAAATATGTGGCACCAGATGACCTCTTCTGTCACCAATCTGCACCCTGCTACACCAGCAACTCGTACTGGAACATTCATTAGCAGATAACGCAAACAAGGCAGAATCGATGCAACCCTCCTCCGCCCCATTCATCTCCCGTTGTCATCATTCCCGGCTCCCAGGGTTCCTCCTCCATCAGAAGCCCAGCTTCACATCCCATCCATCCAGATCTTTGGGCTTCCTTTATCCCCctaccagtgtctagactctaTCGAGGGGATATCAACGGCTTCTATACCCCTTATAAATTAACATtgcgatggagtctaatcgccAAAGACTAACATTTCAAACTATTATGCACCATGTTCATTAAACTTAtttcactctgaaataaagtctctcctgattgaattagcTCTACTGTTCATATTGCATCTGCATCATTAATATTACTTTAGCAATGCACCCTCAGGTACCCAGCAGTCCCCACATAAAACGCTGCTGCATTGCATGGAGGGAAAATCCATTAAGTTGTTTCCCTGTTACAGGACAGGACTGGGCTGTTACTGTATGAGAACGACTGGTCACTTTAGGATCTTTCCTGGAAGACACTTACAGGCTAATGGGCCTAAGATCCATTATGCTAACAGTCAGAAGGAGGGAAGTGGGAGAGTTGTCAGACTCTGTATGCTTTCACCATATTCTAATTTAACTCAATGAAAACCACAGTGCACATAGGCACGCCATTTTCTTAGTAAATCAGGTGGTGTGCCGAGTTTTGCATCCAGGTTGCGGGCAGCAACAATAATTTCTGCCGAATAATGCAACCCCTTAACACTCAAAATCTTTAGTTTTCCCTTGGGGATGCAATTCTTGGCAGGGATGCAAAACTAGGCACATCACTGGCCCATTGTGGCCtaattagtctcgcattgtcagacacacagagagcgggaTGTAAGGGAGAATCCTGTGTCAaatatctctctcacacacacacacacacacacacacacacacacaaaaggtgtGTACAGAGCCTCTCACCTTGACAGGCATGCTCCCTGTCTTCTCCGTGTGGCCCGTGGAGGCTGTGTTCCCTACGTTCACAGGTGGCGTCGCCCCCCCCTGCAGGCTCAGGGCCTTGTCCCGGCGGCGGCGTTTGCTGCTGTCCCGTTGCTCCTTCTGCCTGTTCTGCACCTCCATCAGGGCCGTGATGAACGTGTTCTTCACCTCTTTCTCAAACTCTAGCTCCTCCCGCCGAGCCAGCTGGCTGACCAGCTCCTCTGAGTACTGGCGGATGGCCGCCTCCACCCGGTCCAGCAGCTCCACCAGAGCAGAGCTGGGCATCAGGCTCAGGCCTTCGTAGGAGCAGTTGTTGTTGGAGGCCTGCGACAGCTGCCTGATCTCCTCCAGCAGGGAGGGGTTGGTCATGGAGCAAGGGCTgctctcctcttcatcctcctcctcctcggttTCGCCAGGATCTGGAGAGTTCTCCATCATCTCGACTATCTCCTCAATGACctgatcaGCTGTGATGAGAGGCTCGTCCTTCAGGCAGTTGGCATTGTCATTCTTCTCATTCATCTCCTCGTCCTCTTTTTCGTGGATCTCCTGGTCAGAAAGATTGCCGTTGAGTCCCTCTGAGTCTGTGCCGTCCCAGGTGGAGATGTAGTTGTCAGTTAGAGCATCCCACACaTCTTCGTCCTGcagcctctcctcttcctcctcgctGTGGGACTGGTTGCGTATGGGCGCCAGGCCCTCCGTCTTGGTGTTGTAATTATGGAAGCAAACGTTGAGCTTCTCGTCAAACTCGTTGACCAGGTCCTCCATCGACTTGAAGCTCATCATCTCGGAGAAGTTCTCCAGCTCAGAGAAGTCCTCGCGGGTGATGGAGGCCAGGGGGGCGGTGGTAGTGGAGTAAGAGTGTTTGAGCACTGGGTGGTCCAGCTCATCCATGCGGCAGGGCCGGAGGTCCTCAAACTCCTCATCCAAACACACAAGAGGGGCTTCCATGGTGTC
>XR_005636419.1
ATCCGAATATCTGTCAAATATCCAACATCAAACTAACTTCACCACGGTAAACGTTGGTACTATTAACGTTACTAGCCAACGTTGGCTGGCGAAAATATGGCGGACTTTCcagtaatgtaatggacaaaaGTGATTTGACACTAAAAACAGTATTTAAGATGATTGTAAAAGAACATGATTTTTCTATTAACTTAACCCATGTAACTTGAAAACGAGTAAAGTTACACATCTCCCACATCTAGAAAGGAtttagtctgtctgtgtgggtctcGCTTATTGACGTTCCCATCAGTATTTTTCTATACGTTATTCATCTCCACTCCTTTCATATTAGAGATCAGATGAAGATCAGATGAAGTTCAGCTGGAAACTAACAGAGGGTGATGCAGGGAGAGCCAGCACTGCAGAGTTTGCAGATTAAGTTTTTCTAATTGAAATATGTGGCTCCAGATGACCTCTTCTGTCATCAGTCTGCACCTGCTACATATTATTGGAGTGCCAGCCAGGAGGGACTGAAGGAACAGAAGAGTGTCCCAGTCCTTACTTCGAACCCAGTCCAGAAATTCCAGATCAGCGTGATTAAGTCCAAAGAGGAAAACATGGAGCAGCTCCAGGATGAAGTCAGCTCAGTGCTGTGGTCAATGGGAAAGCCTGAACTCATAAAGGGCGTCATCAACTAAAGTGTAGTGAACCATCAGGGGAAGGATTCCAAGGCTTATCCTGTTGTGCCCCGAGTCGTCTGGCATCAGATGGAGCTTTTCTAGTTGAAATATGTGGCACCAGATGACCTCTTCTGTCACCAATCTGCACCCTGCTACACCAGCAACTCGTACTGGAACATTCATTAGCAGATAACGCAAACAAGGCAGAATCGATGCAACCCTCCTCCGCCCCATTCATCTCCCGTTGTCATCATTCCCGGCTCCCAGGGTTCCTCCTCCATCAGAAGCCCAGCTTCACATCCCATCCATCCAGATCTTTGGGCTTCCTTTATCCCCctaccagtgtctagactctaTCGAGGGGATATCAACGGCTTCTATACCCCTTATAAATTAACATtgcgatggagtctaatcgccAAAGACTAACATTTCAAACTATTATGCACCATGTTCATTAAACTTAtttcactctgaaataaagtctctcctgattgaa
>XR_005636420.1
cttgcttctgcagcgcatgttcaaggaagatACTGGAtggcagcagcgATTAAGTTTTTCTAATTGAAATATGTGGCTCCAGATGACCTCTTCTGTCATCAGTCTGCACCTGCTACATATTATTGGAGTGCCAGCCAGGAGGGACTGAAGGAACAGAAGAGTGTCCCAGTCCTTACTTCGAACCCAGTCCAGAAATTCCAGATCAGCGTGATTAAGTCCAAAGAGGAAAACATGGAGCAGCTCCAGGATGAAGTCAGCTCAGTGCTGTGGTCAATGGGAAAGCCTGAACTCATAAAGGGCGTCATCAACTAAAGTGTAGTGAACCATCAGGGGAAGGATTCCAAGGCTTATCCTGTTGTGCCCCGAGTCGTCTGGCATCAGATGGAGCTTTTCTAGTTGAAATATGTGGCACCAGATGACCTCTTCTGTCACCAATCTGCACCCTGCTACACCAGCAACTCGTACTGGAACATTCATTAGCAGATAACGCAAACAAGGCAGAATCGATGCAACCCTCCTCCGCCCCATTCATCTCCCGTTGTCATCATTCCCGGCTCCCAGGGTTCCTCCTCCATCAGAAGCCCAGCTTCACATCCCATCCATCCAGATCTTTGGGCTTCCTTTATCCCCctaccagtgtctagactctaTCGAGGGGATATCAACGGCTTCTATACCCCTTATAAATTAACATtgcgatggagtctaatcgccAAAGACTAACATTTCAAACTATTATGCACCATGTTCATTAAACTTAtttcactctgaaataaagtctctcctgattgaa

Function

symbol description
fez1 Predicted to be active in axon and cytoplasm. Is expressed in nervous system and neural tube. Orthologous to human FEZ1 (fasciculation and elongation protein zeta 1).

NR:

description
fasciculation and elongation protein zeta-1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU231185 True 2417 TUCP 0.51 8 32443286 32491305
XR_005636419.1 False 1161 lncRNA 0.43 4 32453705 32468067
XR_005636420.1 False 793 lncRNA 0.47 4 32453705 32467380

Neighbor

gene id symbol gene type direction distance location
LOC120544316 LOC102214061,LOC102298006,LOC103357892,LOC101063296 coding downstream 299199 32099217 ~ 32144087 (-)
vps26bl LOC104931657,LOC103357891,LOC100706835,LOC101482660 coding downstream 352845 32078976 ~ 32090441 (-)
LOC120543954 arhgap32 coding downstream 378576 31970880 ~ 32064710 (-)
arhgap32b arhgap32 coding downstream 475644 31917787 ~ 31967642 (-)
h3f3c h3f3b,H3F3A,LOC101073377,LOC107388308,LOC107572204,LOC105909691 coding downstream 529835 31909425 ~ 31913451 (-)
esama LOC103364812,LOC104951165 coding upstream 1755 32493060 ~ 32567042 (-)
LOC120544484 msantd2 coding upstream 86792 32578097 ~ 32589328 (-)
robo4 NA coding upstream 338010 32829315 ~ 32868069 (-)
tmem218 tmem218 coding upstream 384983 32876288 ~ 32884667 (-)
LOC120543965 NA coding upstream 894109 33385414 ~ 33388408 (-)
G170523 NA non-coding downstream 27085 32410272 ~ 32416201 (-)
G170521 NA non-coding downstream 37664 32405341 ~ 32405622 (-)
G170520 cfap58,LOC102788841 non-coding downstream 39838 32403214 ~ 32403448 (-)
G170519 NA non-coding downstream 43387 32396564 ~ 32399899 (-)
G170518 NA non-coding downstream 46774 32394989 ~ 32396512 (-)
G170585 NA non-coding upstream 92064 32583369 ~ 33013812 (-)
LOC120544610 NA non-coding upstream 415053 32906358 ~ 32908784 (-)
G170626 NA non-coding upstream 570177 33061482 ~ 33061700 (-)
G170627 NA non-coding upstream 601723 33093028 ~ 33093318 (-)
G170673 NA non-coding upstream 1009975 33501280 ~ 33505814 (-)
G170463 NA other downstream 241080 32201709 ~ 32202206 (-)
G170098 NA other downstream 1484788 30957501 ~ 30958498 (-)
LOC120543892 LOC103394800 other downstream 1592232 30846998 ~ 30851054 (-)
LOC120543890 LOC103370389,LOC108247974,LOC103394800,LOC106674904 other downstream 1612977 30737565 ~ 30830309 (-)
LOC120575604 NA other downstream 1711204 30718215 ~ 30732082 (-)
ntm LOC100703630,LOC102197934,LOC101488072,LOC102307721,LOC103141059 other upstream 1077316 33568621 ~ 34100246 (-)
G170802 zgc:194989,hist2h2l,LOC107719244,LOC108277172,LOC103356012,LOC107574861,LOC108179079 other upstream 1817689 34308994 ~ 34309714 (-)
cblb cblb other upstream 2432068 34923373 ~ 35016119 (-)
LOC120575651 LOC105011014,LOC103356025,LOC103395028,LOC106603763 other upstream 3615509 36106814 ~ 36246233 (-)
LOC120575647 kirrel3,LOC106567547,LOC105011011 other upstream 3925618 36416923 ~ 36780232 (-)

Expression


Co-expression Network