alg9 (alg9,LOC102790096)


Basic Information

Item Value
gene id alg9
gene name alg9,LOC102790096
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 21180245 ~ 21188473 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777078.1
CGGCGAAAATGAACGAAGCCCGACTCGGGTGCAGCATCGGAAAACATGGCGGCCAAAGCGCTTCGGCAGCGAACCAGGCGAGGCAGCAGACAAGATGCAAACAACGTTAACGTCCCCGCTGAAGCCCGGCCACCGAAAGAGGAGAAAGTCGGCGATGACAGTAAAACCACAGAGACCCGGCCGGAgtcaGTAAGTCGTGCAGGCCAGGTATGGGCTCCAGAAGGTTCAACTGCATTTAAATGCCTGCTTTCCGCACGTTTTTGTGCAGCTTTGCTCAGCAACATCTCAGACTGCGATGAGACCTTCAACTACTGGGAGCCTATGcactacctgctgtatggcacAGGGATGCAAACATGGGAATATTCTCCTTTGTACGCCATCAGGTCGTACGCTTACTTATGGTTACATGCTATTCCGGCTTGTTTGCATGCCCATGTTCTACAGACAAACAAGGTGTTGGTGTTCTACTTTGTACGATGTGTATTAGCATTCTCCTGCTGTGTCTGTGAACTCTATTTCTACAAggCAGTTTGTAAGAAGTTTGGTTTGCATGTGGGCCGTCTAATGTTGGCATTCCTTGTCCTGAGCACGGGAATGTTCTGCTCGTCTGCAGCATTCCTGCCTTCCTCTTTCTGTATGTACACAACGCTGGTTGCCATGACTGGGTGGTTTCAGGACTCAGCACCATTAGCCATCATGGGTGTGGCTGCCGGTGCCATCGTTGGATGGCCgttctctgctctgattgggatTCCGATCGCCTTCGACCTGCTGGTGTTAAAGAGGCAGTGGGAAAGTTTTATCACCTGGTCAGCTGTTgctctgcttctgctgctggtacccctcatggCAGTAGACTCTTTCTTTTATGGCAAACTGGTCATTGCTCCACTCAATATTCTGCTGTATAACGTCTTCACGCCACATGGACCTGATTTGTATGGCACAGAGCCATGGCATTTCTACTTTGCAAATGGGATCCTGAACTTCAACCTGGTGTTTGTTCTGGCACTGTTTTCTCTGCCACTCACTGCTCTCATGGAGACACTGTTACACAGGTTCAATGTGCAGAACCTGGGCCGTCCATACTGGCTGACTCTGTCTCCCATGTATCTGTGGATGTTGGTTTTCTTCACCAGACCTCATAAAGAAGAACGTTTTCTATTTCCCATCTACCCTCTCATCTGCCTCAGCGGGGCAGTAGCCCTCTCCTCTCTACAGAAATGTTACCACTTCCTGTTCCAGCGGTATCGACTTGAGCACTACACAGTCTCCTCCAACTGGTTGGCTCTTAGTGCAGTCGTGGTCTTCTCAGTGCTGTCACTGTCTCGCTCTGTCGCCCTCTTCAGagGCTACCACGCCCCTCTGGACCTGTACCCAGAGTTCCATCGCATCGCCAAGGATCCGACTCTTCACTCAGTCCCCGAAGGCAGacctgttagtgtgtgtgtgggcaaaGAGTGGTACCGCTTCCCAAGCAGCTTCCTGCTACCGCACAACTGGCAACTGCACTTCATTCAGTCTGAGTTTAAAGGGCAGCTGCCTCAGCCATACGCCTCTGGTCCTCTGGCCACTCAGAGCATCCCAGCTAATATGAATGACCAGAATCTGGAGGAGCCAACTAGATATGTGGATTTACGGCAGTGCCACTACGTAGTAGATCTGGACACAGATGAAGAAACGCCACTGGAGCCACGTTATTCCGCCAACAAAGAGGAGTGGAACATCATAGCCTATAAGCGTTTCCTTCAAGCCTCAAGGTCATCTCCGCTCTTCAGAGCGCTCTACATCCCATTTCTATCAGATCATCACACCACCTATAGGCGCTACGTCATCTTGAAACCACGGCGGCAAAAGCAGCCTCGTAAGCGGACCCATGGCTGACCTTTGAACCTCTACCTTGGCCAAAGTGCAAAATCTTAACATAAGAAATCAATCCCTTCCCTCATGACTCATTTGAAGATATCAGACCCTTTTAAGGACATTATGTCTGCTGGGCTTGTGTGTGACTAAAGAGAAactgttatgtatgtatgttatgttatgtacagtatgtgttcttGGCAGGTatcaggtgtgtgtctgtgtgtctgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

symbol description
alg9 Predicted to enable alpha-1,2-mannosyltransferase activity. Predicted to be involved in protein N-linked glycosylation. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum membrane. Is expressed in central nervous system; epiphysis; polster; and retina. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Il. Orthologous to human ALG9 (ALG9 alpha-1,2-mannosyltransferase).

NR:

description
PREDICTED: alpha-1,2-mannosyltransferase ALG9 isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG:

id description
K03846 ALG9; alpha-1,2-mannosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777078.1 True 2136 mRNA 0.50 15 21180245 21188473

Neighbor

gene id symbol gene type direction distance location
chek1 chek1 coding downstream 27553 21144929 ~ 21152692 (-)
bud13 LOC106633751 coding downstream 100144 21075568 ~ 21080101 (-)
arhgap42a LOC103355103 coding downstream 113028 21048863 ~ 21067217 (-)
LOC120544403 LOC104934526,LOC103355106 coding downstream 165095 21004634 ~ 21015150 (-)
birc2 birc2 coding downstream 176235 20992197 ~ 21004010 (-)
fdxacb1 fdxacb1 coding upstream 106 21188579 ~ 21191988 (-)
bicdl2 LOC103355093,LOC104964650 coding upstream 8060 21196533 ~ 21202268 (-)
LOC120544720 NA coding upstream 16231 21204704 ~ 21206812 (-)
LOC120544786 NA coding upstream 68724 21257197 ~ 21257288 (-)
LOC120543861 pcnx3 coding upstream 79895 21268368 ~ 21293314 (-)
G167179 NA non-coding downstream 192327 20987212 ~ 20987918 (-)
G167176 NA non-coding downstream 197308 20981723 ~ 20982937 (-)
G167152 NA non-coding downstream 246261 20931407 ~ 20933984 (-)
G167148 cct8 non-coding downstream 252093 20926623 ~ 20928152 (-)
G167083 NA non-coding downstream 376278 20801207 ~ 20803967 (-)
G167316 NA non-coding upstream 58412 21246885 ~ 21248228 (-)
G167367 LOC104936496,LOC104961720,LOC108428037,LOC102785324 non-coding upstream 242367 21430840 ~ 21435916 (-)
G167371 LOC103141239,LOC106952034,LOC102230208,LOC103475454,LOC106921555,LOC104936496,LOC105919852,LOC103356782 non-coding upstream 257695 21446168 ~ 21447176 (-)
G167373 NA non-coding upstream 260359 21448832 ~ 21449560 (-)
G167420 NA non-coding upstream 399405 21587878 ~ 21608765 (-)
snrnp35 snrnp35,LOC102792111 other downstream 89798 21073053 ~ 21090447 (-)
G167129 aldoc other downstream 227711 20944001 ~ 20952534 (-)
G166843 NA other downstream 1380312 19746178 ~ 19799933 (-)
G166840 sod1 other downstream 1460522 19714639 ~ 19719723 (-)
haus1 haus1 other downstream 1504055 19672078 ~ 19676190 (-)
G167416 NA other upstream 385745 21574218 ~ 21584182 (-)
brd8a brd8,LOC104924599 other upstream 533845 21722318 ~ 21741824 (-)
LOC120543962 LOC103368266 other upstream 656224 21844697 ~ 21863744 (-)
G167589 prdx4,LOC101470355 other upstream 808486 21996959 ~ 21998648 (-)
zbtb20 zbtb20 other upstream 1029587 22218060 ~ 22250378 (-)

Expression


Co-expression Network