LOC120544720


Basic Information

Item Value
gene id LOC120544720
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 21204704 ~ 21206812 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778672.1
AGCACAGCAGCACCAATCTCAGGCTAACCAAGAATCCGCCTCCCTCATACCCATCGTTTTTACATTTCCTCTGGAATCTCATCATGGATATCCCCATCCAGTATCCCTGGTACCGTCGGGCCTTTCCACATCGACTTTCTGACCTCTCCTTGGCAGAACCTCTCACTGATTGGCCACTAATCTGGCCCTTCCCCTGGTCCTTCCCCTGGATACGCCCTTCATTCATGCGCTGGTTCAACTGGCCCGACAATGGACACAGTGAGATGCGCATTGAAAAGGATCACTACATCATTCATGTGGATGTGAAGTTTTTCTCACCTGAAGAGCTGTCTGTCAATATCGGTGACGAGTTCATCACAGTACATGGCAAACATGAGGGCAGACAGGATGACCACGGCTTTGTGTCAAGAGAGTTTCTGAGGAAATATAGGCTTCCTGCTGGAGTGTCAAGTGCTGATGTCAACGCCAGTCTGTCATTTGATGGTATCCTTACAATCACTGCACCTCGGTCATCTTCCGGCTCAGAGCGCCCTATTCCTGTTTCCTGTGAAGATGGAAcagcaaaacagaaaatgtagaGCAGAGTCTGACGCTCCTCACACTGTTTCACTACTAATCCTAAATGctgcctgtttttatttttaacctgtTAACAGTTTTGTTGGCAGTTTAGTACACATGCAGTAGGCAGGGCATACAGGTCTAGATGTCTATAAGTGCCTTCTAACACACCAGTATCTAATTCCTAACTCACTGTTATTCCCAAGTATCTGCAAGACAATGGTGCTTTGAAATTAAAGGCTAATCGTGGAGCTTATGTAATGACAAAGTGTTGTATAGACACAGTAGGGTGAGGTGCAGGATAATGAACTTCTGAGAGTTAATTTCCCTATCACAAGCCTACAGAACTCCCTCTTTAACCCATACATCCCGATTAAAAATATTCACACCTCTGTGTATGTAAATGACACATTAAGGGCATGTAATAATTGTTTGAAAGGCATTCCCCGAATGTTATATAAGGTCTTTACTGGCCCTGCAGTTAAGTGACAAAACTGTAAACATTTGTTATTTGAACTCAAACTAACTTGCAGCACTTATTAGTTTTACAGGGAAATGCTAAAATGTCAATTTAAGGGGGTGGAAATGTAAAGACTAACTCAAAATTGTCCACTGAAGATGGTAACAGACTAAAATTGTTAAACTTAATTGCATCTACAGTACACAGTACTGTCTGAGGGTGTATGAGTAAGATGCCAACTGTGCTTTGTTTATTCTTTTAGAATAGTGTTGGTTTCAGTATGTGTGAGGAGGAGGGAGTTCTCTGGAGGCATATGCAGTCATTTTTTAGATTGTTCACTAAAAAAAAAGCCACCAAAGGACTTGGGACCAGGTGTGTGTAAAGAAGGAGGGTGAATGAGCCGTAGGGACGTAGTGGACGAGGGAGGAACTGATGTTTATCACTGGGCTCCTTTTCCACTGGGGAGCATGGCCTCTGAGCTGCTAAGGAAAGAGTGTGTGAAGATATGTGAGAGTGAATGCATAATGTGCTTGTAGATGCAAGAGTTACAGCTTTATCATTCCTTCACATTGGCAAAAACCCTCTGGCATATTaacacagaaaacaacaaatagAATAAATGTTGAAACTCAAAATCAA

Function

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0005212 structural constituent of eye lens molecular_function
GO:0051082 unfolded protein binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778672.1 True 1660 mRNA 0.43 3 21204704 21206812

Neighbor

gene id symbol gene type direction distance location
bicdl2 LOC103355093,LOC104964650 coding downstream 2436 21196533 ~ 21202268 (-)
fdxacb1 fdxacb1 coding downstream 12716 21188579 ~ 21191988 (-)
alg9 alg9,LOC102790096 coding downstream 16231 21180245 ~ 21188473 (-)
chek1 chek1 coding downstream 52012 21144929 ~ 21152692 (-)
bud13 LOC106633751 coding downstream 124603 21075568 ~ 21080101 (-)
LOC120544786 NA coding upstream 50385 21257197 ~ 21257288 (-)
LOC120543861 pcnx3 coding upstream 61556 21268368 ~ 21293314 (-)
LOC120543925 LOC100710932,LOC102785624,LOC101481487,LOC103395730,LOC102210535,LOC103356781,LOC108236962 coding upstream 90103 21296915 ~ 21423480 (-)
nrg2a nrg2,LOC100711745,LOC102211978,LOC102784840 coding upstream 283307 21490119 ~ 21560421 (-)
cxxc5a cxxc5,LOC103356789,LOC100712281,LOC105919858,LOC103141297 coding upstream 447365 21654177 ~ 21672254 (-)
G167179 NA non-coding downstream 216786 20987212 ~ 20987918 (-)
G167176 NA non-coding downstream 221767 20981723 ~ 20982937 (-)
G167152 NA non-coding downstream 270720 20931407 ~ 20933984 (-)
G167148 cct8 non-coding downstream 276552 20926623 ~ 20928152 (-)
G167083 NA non-coding downstream 400737 20801207 ~ 20803967 (-)
G167316 NA non-coding upstream 40073 21246885 ~ 21248228 (-)
G167367 LOC104936496,LOC104961720,LOC108428037,LOC102785324 non-coding upstream 224028 21430840 ~ 21435916 (-)
G167371 LOC103141239,LOC106952034,LOC102230208,LOC103475454,LOC106921555,LOC104936496,LOC105919852,LOC103356782 non-coding upstream 239356 21446168 ~ 21447176 (-)
G167373 NA non-coding upstream 242020 21448832 ~ 21449560 (-)
G167420 NA non-coding upstream 381066 21587878 ~ 21608765 (-)
snrnp35 snrnp35,LOC102792111 other downstream 114257 21073053 ~ 21090447 (-)
G167129 aldoc other downstream 252170 20944001 ~ 20952534 (-)
G166843 NA other downstream 1404771 19746178 ~ 19799933 (-)
G166840 sod1 other downstream 1484981 19714639 ~ 19719723 (-)
haus1 haus1 other downstream 1528514 19672078 ~ 19676190 (-)
G167416 NA other upstream 367406 21574218 ~ 21584182 (-)
brd8a brd8,LOC104924599 other upstream 515506 21722318 ~ 21741824 (-)
LOC120543962 LOC103368266 other upstream 637885 21844697 ~ 21863744 (-)
G167589 prdx4,LOC101470355 other upstream 790147 21996959 ~ 21998648 (-)
zbtb20 zbtb20 other upstream 1011248 22218060 ~ 22250378 (-)

Expression


Co-expression Network