LOC120543793


Basic Information

Item Value
gene id LOC120543793
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 33102819 ~ 33103225 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636399.1
tcaggaagtaACTGCATGCTATATAGGCAGGGGGTTTGACCTCTTCACTCTTTGTTGCTGGAAGCACACTTCCGCTCTGGGGCCTTTCGCGGTGCAGTCACGGTTGTGCAACAGTGTCTCCCTGTCACAAACCCGATCTTTCCTGTAACGGAACCGGGTTGAGTGTTGCTGCTGGCTCTGTGTAGCTGTACTATCGGCACTGTCGGTGTATTGGTGCGAAGCTCCCTGACTGGTATGTATACCAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636399.1 True 247 lncRNA 0.53 3 33102819 33103225

Neighbor

gene id symbol gene type direction distance location
panx3 panx3,LOC102789912 coding upstream 81899 33010814 ~ 33020920 (+)
fez1 fez1 coding upstream 644502 32434959 ~ 32458317 (+)
crx LOC103357888 coding upstream 1196378 31901989 ~ 31906441 (+)
trnas-gcu_13 NA coding upstream 1293913 31808825 ~ 31808906 (+)
trnas-gcu_12 NA coding upstream 1295015 31807723 ~ 31807804 (+)
opcml LOC103394960,LOC103366991,LOC104930635,LOC102299579,LOC100703901,LOC101464466 coding downstream 8368 33111593 ~ 33503252 (+)
LOC120544785 NA coding downstream 249039 33352264 ~ 33352329 (+)
lim2.1 LOC103356037,LOC104955000,LOC104935109 coding downstream 1117338 34220563 ~ 34225105 (+)
bsx bsx coding downstream 1125395 34228620 ~ 34230777 (+)
LOC120544501 zgc:194989,hist2h2l,LOC107719244,LOC107667924,LOC107574861,LOC108277172 coding downstream 1205672 34308897 ~ 34309654 (+)
G170466 NA non-coding upstream 707943 32394622 ~ 32394876 (+)
G170417 NA non-coding upstream 999602 32099253 ~ 32103217 (+)
G170410 NA non-coding upstream 1021941 32078537 ~ 32080878 (+)
G170384 h3f3b,LOC107377396,LOC101073377,LOC107550302 non-coding upstream 1190407 31910912 ~ 31912412 (+)
G170365 capns1,LOC107700232,LOC107548486,LOC107655908 non-coding upstream 1270183 31830100 ~ 31832636 (+)
G170631 NA non-coding downstream 144804 33248029 ~ 33248381 (+)
G170643 NA non-coding downstream 524064 33627289 ~ 33735009 (+)
G170716 NA non-coding downstream 1129954 34233179 ~ 34236999 (+)
G170719 LOC104954996 non-coding downstream 1134921 34238146 ~ 34240070 (+)
G170717 hspa8,LOC105921217,LOC102234316,LOC107386347,LOC108249515,LOC106535866,LOC103356016 non-coding downstream 1174919 34278144 ~ 34282590 (+)
pknox2 pknox2 other upstream 98480 32887581 ~ 33004339 (+)
robo3 LOC103364814 other upstream 287276 32712598 ~ 32815543 (+)
cfap58 cfap58,LOC102788841 other upstream 678790 32401922 ~ 32424029 (+)
igsf9bb LOC103357894,LOC103394972 other upstream 708289 32246928 ~ 32394530 (+)
G170409 NA other upstream 1038089 32064167 ~ 32064730 (+)
G170735 hyou1 other downstream 1229189 34332414 ~ 34336348 (+)
G170775 dlg2 other downstream 1333735 34436960 ~ 34442150 (+)
G170896 NA other downstream 1936717 35039942 ~ 35040371 (+)
LOC120575607 NA other downstream 1980664 35083889 ~ 35087897 (+)
LOC120575668 NA other downstream 2219035 35322260 ~ 35324252 (+)

Expression


Co-expression Network