Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120545735 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053128.1 |
| NCBI id | CM020925.1 |
| chromosome length | 37416781 |
| location | 33255500 ~ 33257144 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU243803 | True | 265 | lncRNA | 0.50 | 4 | 33255503 | 33257144 |
| TU243806 | False | 232 | lncRNA | 0.50 | 3 | 33255503 | 33257144 |
| XR_005636730.1 | False | 251 | lncRNA | 0.45 | 4 | 33255500 | 33257024 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| gpat3 | gpat3 | coding | downstream | 65483 | 33163597 ~ 33190017 (-) |
| LOC120545728 | NA | coding | downstream | 133825 | 33116292 ~ 33121675 (-) |
| helq | helq | coding | downstream | 153141 | 33009716 ~ 33102359 (-) |
| LOC120545084 | NA | coding | downstream | 300069 | 32950042 ~ 32955431 (-) |
| trappc1 | trappc1 | coding | downstream | 315210 | 32934244 ~ 32940290 (-) |
| LOC120545723 | NA | coding | upstream | 410 | 33257554 ~ 33263566 (-) |
| gfra2b | gfra2,LOC106524419,LOC101468026,LOC102196137,LOC108242531 | coding | upstream | 144597 | 33401741 ~ 33520251 (-) |
| LOC120545889 | pbdc1,LOC102798581 | coding | upstream | 426722 | 33683866 ~ 33685117 (-) |
| LOC120545887 | pbdc1 | coding | upstream | 438232 | 33695376 ~ 33707710 (-) |
| ppp3ccb | LOC102194384,LOC100690594,LOC101470341,LOC101074783 | coding | upstream | 499393 | 33756537 ~ 33807087 (-) |
| G179984 | NA | non-coding | downstream | 59086 | 33196107 ~ 33196414 (-) |
| G179977 | NA | non-coding | downstream | 62169 | 33149291 ~ 33193331 (-) |
| G179981 | NA | non-coding | downstream | 65891 | 33189250 ~ 33189609 (-) |
| G179964 | NA | non-coding | downstream | 80133 | 33145946 ~ 33175367 (-) |
| G179979 | NA | non-coding | downstream | 92378 | 33162760 ~ 33163122 (-) |
| G180616 | NA | non-coding | upstream | 17117 | 33274261 ~ 33325782 (-) |
| G180630 | NA | non-coding | upstream | 166049 | 33423193 ~ 33423574 (-) |
| G180660 | NA | non-coding | upstream | 496437 | 33753581 ~ 33755251 (-) |
| G180663 | NA | non-coding | upstream | 513447 | 33770591 ~ 33770951 (-) |
| G180652 | NA | non-coding | upstream | 530695 | 33787839 ~ 33838719 (-) |
| LOC120545720 | NA | other | downstream | 159271 | 33094069 ~ 33096229 (-) |
| hpse | NA | other | downstream | 250971 | 32992375 ~ 33004529 (-) |
| LOC120545085 | NA | other | downstream | 287350 | 32957851 ~ 32968150 (-) |
| LOC120545725 | NA | other | downstream | 403575 | 32790695 ~ 32851925 (-) |
| G179923 | LOC106675582 | other | downstream | 403890 | 32717847 ~ 32851610 (-) |
| LOC120545090 | NA | other | upstream | 47470 | 33304614 ~ 33678810 (-) |
| G180628 | NA | other | upstream | 154959 | 33412103 ~ 33412619 (-) |
| G180640 | NA | other | upstream | 405032 | 33662176 ~ 33707638 (-) |
| G180665 | NA | other | upstream | 542138 | 33799282 ~ 33800420 (-) |
| G180765 | slc25a46 | other | upstream | 1032633 | 34289777 ~ 34386787 (-) |
