G180660


Basic Information

Item Value
gene id G180660
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 33753581 ~ 33755251 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU244821
taACAATGATCCCTCGTAAACACACCTCTCTCATCGCTTCAGCTGGGACCTTCTGTACTTCAGGCAGTCCTTCTGATTCTCTCTCGCTTTAAGATTTAACTCTCccgttgtcctcgggtcaagtCTGACCCTTTCTCAAagttttctatatcagaaatgtgggtttctttcaacaaaattcCCCAAAAAGAGCCAGATGGTTCAACGCATTCAAAGAATGTCGACTACAAAgacataaaagtgacaaaaacataaaaataaaaaaaaaacccgacTACAAAGCctagaaaacagcagaataaTGCgtcaaacaacaaagcacttacaatgttttaaaaagagacaaaaacgtaaaaaaataaaattaattaaaaaataaaaacgaaataggaaaaagtgagagagagaaacgtcggaaaaagtgaccatAAAATTGGAGAAAAAGTGACAACGAAATTGTGAAacaatgtgacaataaaattggaCAAAAGTGacaataaaattggacaaaagtgacaaaattgggaaaaagtgacaataaaattgGACAAAAATCAACCAATACGTcgagaaaagtgtagaaaaagaactCCAAAATGTTGCCATTTTGAGCCAGAAAAACCCAAAGGGGCATGATGTCGACATGAAGACAACCCGAGCGTTGAACCTATAGAACAGATGATATTAAGGCTTTCCGCTCCTACAGAAATTCCTCTGGTGTGAGTTGGTCGACTGGTTGATTATTTGGTGAAATCGACAGAGTTTCTCCGTgaagaatcatgcaaaagcacaaCGAATATGAGCAAAGTAGACGGTTGGAAATTCCCTTTTGATCATGTGACTAGTGAATGTTTCTGACTCATCGGACTTCTTTTTCAAATATTAATAAGAATCCCGTTACTGATCGAGAAGACGGACAGAAATCTCCCAAAAACAAAGACCCACATTTGCCTAAATGTCTGTTTATAAATCtacaaagagaagcaggagagaAGGGAACCTGGGACCTTTTGGGTGcgtttgatttcatgttgtttttctttctgtttgcgGGCGGGTGGGTGTTTGGAGCGAGGCCTCCTTTCTGACTTCTGTTCGGCTCTCAGAACATATCTCACAGAATGTACAGAAACCGTTTAAAAAGATGAAGTCCACTTT
>TU244822
tatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataatactgtaACAATGATCCCTCGTAAACACACCTCTCTCATCGCTTCAGCTGGGACCTTCTGTACTTCAGGCAGTCCTTCTGATTCTCTCTCGCTTTAAGATTTAACTCTCccgttgtcctcgggtcaagtCTGACCCTTTCTCAAagttttctatatcagaaatgtgggtttctttcaacaaaattcCCCAAAAAGAGCCAGATGGTTCAACGCATTCAAAGAATGTCGACTACAAAgacataaaagtgacaaaaacataaaaataaaaaaaaaacccgacTACAAAGCctagaaaacagcagaataaTGCgtcaaacaacaaagcacttacaatgttttaaaaagagacaaaaacgtaaaaaaataaaattaattaaaaaataaaaacgaaataggaaaaagtgagagagagaaacgtcggaaaaagtgaccatAAAATTGGAGAAAAAGTGACAACGAAATTGTGAAacaatgtgacaataaaattggaCAAAAGTGacaataaaattggacaaaagtgacaaaattgggaaaaagtgacaataaaattgGACAAAAATCAACCAATACGTcgagaaaagtgtagaaaaagaactCCAAAATGTTGCCATTTTGAGCCAGAAAAACCCAAAGGGGCATGATGTCGACATGAAGACAACCCGAGCGTTGAACCTATAGAACAGATGATATTAAGGCTTTCCGCTCCTACAGAAATTCCTCTGGTGTGAGTTGGTCGACTGGTTGATTATTTGGTGAAATCGACAGAGTTTCTCCGTgaagaatcatgcaaaagcacaaCGAATATGAGCAAAGTAGACGGTTGGAAATTCCCTTTTGATCATGTGACTAGTGAATGTTTCTGACTCATCGGACTTCTTTTTCAAATATTAATAAGAATCCCGTTACTGATCGAGAAGACGGACAGAAATCTCCCAAAAACAAAGACCCACATTTGCCTAAATGTCTGTTTATAAATCtacaaagagaagcaggagagaAGGGAACCTGGGACCTTTTGGGTGcgtttgatttcatgttgtttttctttctgtttgcgGGCGGGTGGGTGTTTGGAGCGAGGCCTCCTTTCTGACTTCTGTTCGGCTCTCAGAACATATCTCACAGAATGTACAGAAACCGTTTAAAAAGATGAAGTCCACTTT
>TU244823
taACAATGATCCCTCGTAAACACACCTCTCTCATCGCTTCAGCTGGGACCTTCTGTACTTCAGGCAGTCCTTCTGATTCTCTCTCGCTTTAAGATTTAACTCTCccgttgtcctcgggtcaagtCTGACCCTTTCTCAAagttttctatatcagaaatgtgggtttctttcaacaaaattcCCCAAAAAGAGCCAGATGGTTCAACGCATTCAAAGAATGTCGACTACAAAgacataaaagtgacaaaaacataaaaataaaaaaaaaacccgacTACAAAGCctagaaaacagcagaataaTGCgtcaaacaacaaagcacttacaatgttttaaaaagagacaaaaacgtaaaaaaataaaattaattaaaaaataaaaacgaaataggaaaaagtgagagagagaaacgtcggaaaaagtgaccatAAAATTGGAGAAAAAGTGACAACGAAATTGTGAAacaatgtgacaataaaattggaCAAAAGTGGCCATAAAATTGGAGACAAAGTGACGATAAAATTGGACAAAAGTGACCATAAAATTGggaaaaaaatgacaaaatttgACAAAAGTGACGATAAAATTGGAGAcaaagtgacaataaaattggagacaaagtgacaataaaattgggacaaaagtgacaataaaattgtgaataaaattggacaaaagtgacaataaaattgggacaaaagtgacaataaaattgggaaaaaaatgacaaaattggACAAAGGTGACGATACAATTGGAGAcaaagtgacaataaaattgGGACAAAAGTGACCATAAAATTGGAGAcaaagtgacaataaaattgGACAAAAGTGACCATAAAATTGGAGAcaaagtgacaataaaattgGGACAAAAGTGACCATAAAATTGGAGAcaaagtgacaataaaattggacaaaagtgacaaaattgggaaaaagtgacaataaaattgGACAAAAATCAACCAATACGTcgagaaaagtgtagaaaaagaactCCAAAATGTTGCCATTTTGAGCCAGAAAAACCCAAAGGGGCATGATGTCGACATGAAGACAACCCGAGCGTTGAACCTATAGAACAGATGATATTAAGGCTTTCCGCTCCTACAGAAATTCCTCTGGTGTGAGTTGGTCGACTGGTTGATTATTTGGTGAAATCGACAGAGTTTCTCCGTgaagaatcatgcaaaagcacaaCGAATATGAGCAAAGTAGACGGTTGGAAATTCCCTTTTGATCATGTGACTAGTGAATGTTTCTGACTCATCGGACTTCTTTTTCAAATATTAATAAGAATCCCGTTACTGATCGAGAAGACGGACAGAAATCTCCCAAAAACAAAGACCCACATTTGCCTAAATGTCTGTTTATAAATCtacaaagagaagcaggagagaAGGGAACCTGGGACCTTTTGGGTGcgtttgatttcatgttgtttttctttctgtttgcgGGCGGGTGGGTGTTTGGAGCGAGGCCTCCTTTCTGACTTCTGTTCGGCTCTCAGAACATATCTCACAGAATGTACAGAAACCGTTTAAAAAGATGAAGTCCACTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244821 False 1158 lncRNA 0.38 2 33753581 33755175
TU244822 False 1234 lncRNA 0.36 2 33753581 33755251
TU244823 True 1573 lncRNA 0.36 2 33753581 33755175

Neighbor

gene id symbol gene type direction distance location
LOC120545887 pbdc1 coding downstream 45871 33695376 ~ 33707710 (-)
LOC120545889 pbdc1,LOC102798581 coding downstream 68464 33683866 ~ 33685117 (-)
gfra2b gfra2,LOC106524419,LOC101468026,LOC102196137,LOC108242531 coding downstream 233330 33401741 ~ 33520251 (-)
LOC120545723 NA coding downstream 490015 33257554 ~ 33263566 (-)
gpat3 gpat3 coding downstream 563564 33163597 ~ 33190017 (-)
ppp3ccb LOC102194384,LOC100690594,LOC101470341,LOC101074783 coding upstream 1286 33756537 ~ 33807087 (-)
LOC120545092 NA coding upstream 69882 33825133 ~ 33839832 (-)
LOC120545093 LOC107740693 coding upstream 98893 33854144 ~ 33856665 (-)
LOC120545094 LOC107740693 coding upstream 102901 33858152 ~ 33859644 (-)
LOC120545258 NA coding upstream 112742 33867993 ~ 33870879 (-)
G180630 NA non-coding downstream 330007 33423193 ~ 33423574 (-)
G180616 NA non-coding downstream 427799 33274261 ~ 33325782 (-)
LOC120545735 NA non-coding downstream 496437 33255500 ~ 33257144 (-)
G179984 NA non-coding downstream 557167 33196107 ~ 33196414 (-)
G179981 NA non-coding downstream 563972 33189250 ~ 33189609 (-)
G180663 NA non-coding upstream 15340 33770591 ~ 33770951 (-)
G180652 NA non-coding upstream 32588 33787839 ~ 33838719 (-)
G180664 NA non-coding upstream 33334 33788585 ~ 33797896 (-)
G180654 NA non-coding upstream 69106 33824357 ~ 33824836 (-)
G180675 NA non-coding upstream 106952 33862203 ~ 33862543 (-)
G180640 NA other downstream 45943 33662176 ~ 33707638 (-)
LOC120545090 NA other downstream 74771 33304614 ~ 33678810 (-)
G180628 NA other downstream 340962 33412103 ~ 33412619 (-)
LOC120545720 NA other downstream 657352 33094069 ~ 33096229 (-)
hpse NA other downstream 749052 32992375 ~ 33004529 (-)
G180665 NA other upstream 44031 33799282 ~ 33800420 (-)
G180765 slc25a46 other upstream 534526 34289777 ~ 34386787 (-)
ythdc1 ythdc1,LOC102794570 other upstream 856746 34611997 ~ 34679586 (-)
apc apc,LOC104937427,LOC106906682 other upstream 968625 34723876 ~ 34773434 (-)
LOC120545099 NA other upstream 1070200 34825451 ~ 34844811 (-)

Expression


Co-expression Network