LOC120545092


Basic Information

Item Value
gene id LOC120545092
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 33825133 ~ 33839832 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779082.1
tgcaggtTTCTACAGAGTGGAGCTGAGGCCGTGGATGCCTGCACCTGGCACCATTACTACGTGAACGGCAGAGACACGTCTCTGGAGGACTTTCTGGATCCTGAGATCCTGGACACTCTGGCCCTGAAGACTAAAGAAGTCCTGCAGAAAGTAAAGCTGGTGTCTCCAGAGAAGCCGGTGTGGCTCGGCGAGACGAGCTCGGCGTACGGAGGAGGAGCTGTCGGCCTGTCGGACACCTTCGCCGCAGGATTCATgtggttGGATAAGCTGGGCCTTGCAGCCACCCTGGGCCTGGATGTTGTGATGCGGCAGGTGTTGATTGGCTCTGGGAGTTATCACCTGGTGGATGACAACTTGGACCCTCTCCCtgaCTACTGGCTGTCTCTTCTCTACAAGACTCTGGTGGGTCCAGAGGTTTTGAGAGTTGAGTTCTCCAGCTTGGCTCGCAGTAAAACCGTGAGGCTGTATCTGCACTGCTCCACCAGACTCAGgtACCAGCGTGGAGCCGTGACGCTGATGTCTCTGAACCTCAGCGAGAAGCCGGCCAGCGTCTGTCTCCCGCCACTCACCCCCCCCCTCACAGTGGACGCCTTCATACTGCAGCCAGGGGAGGGGGGGCTCTACTCCagGTCTGTGCAGCTGAATGGCGCCCTGTTAAAGATGGAGGACGACCAGACTCTCCCTGACCTCTCAGCGTCTCGTCTTCCTCCGTCTGACCGGCTGCAGCTTCCTGCCTTCTCGCTCGCCTTCTTCGTGCTCACGGACGCCAAGGCAGCCGCCTGTCTCTGaccctctacacacacacagacacacacatgcacgcacgcacacacacacacacaga

Function

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0016020 membrane cellular_component
GO:0016798 hydrolase activity, acting on glycosyl bonds molecular_function

KEGG:

id description
K07964 HPSE; heparanase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779082.1 True 844 mRNA 0.59 7 33825133 33839832

Neighbor

gene id symbol gene type direction distance location
ppp3ccb LOC102194384,LOC100690594,LOC101470341,LOC101074783 coding downstream 18046 33756537 ~ 33807087 (-)
LOC120545887 pbdc1 coding downstream 117423 33695376 ~ 33707710 (-)
LOC120545889 pbdc1,LOC102798581 coding downstream 140016 33683866 ~ 33685117 (-)
gfra2b gfra2,LOC106524419,LOC101468026,LOC102196137,LOC108242531 coding downstream 304882 33401741 ~ 33520251 (-)
LOC120545723 NA coding downstream 561567 33257554 ~ 33263566 (-)
LOC120545093 LOC107740693 coding upstream 14312 33854144 ~ 33856665 (-)
LOC120545094 LOC107740693 coding upstream 18320 33858152 ~ 33859644 (-)
LOC120545258 NA coding upstream 28161 33867993 ~ 33870879 (-)
LOC120545096 NA coding upstream 230253 34070085 ~ 34071579 (-)
LOC120545310 NA coding upstream 331304 34171136 ~ 34173071 (-)
G180654 NA non-coding downstream 297 33824357 ~ 33824836 (-)
G180664 NA non-coding downstream 27237 33788585 ~ 33797896 (-)
G180663 NA non-coding downstream 54182 33770591 ~ 33770951 (-)
G180660 NA non-coding downstream 69882 33753581 ~ 33755251 (-)
G180630 NA non-coding downstream 401559 33423193 ~ 33423574 (-)
G180675 NA non-coding upstream 22371 33862203 ~ 33862543 (-)
G180714 NA non-coding upstream 142541 33982373 ~ 33982818 (-)
G180748 NA non-coding upstream 325382 34165214 ~ 34165722 (-)
G180677 NA non-coding upstream 397081 34236913 ~ 34239131 (-)
LOC120545331 NA non-coding upstream 407656 34247488 ~ 34269083 (-)
G180665 NA other downstream 24713 33799282 ~ 33800420 (-)
G180640 NA other downstream 117495 33662176 ~ 33707638 (-)
LOC120545090 NA other downstream 146323 33304614 ~ 33678810 (-)
G180628 NA other downstream 412514 33412103 ~ 33412619 (-)
LOC120545720 NA other downstream 728904 33094069 ~ 33096229 (-)
G180765 slc25a46 other upstream 449945 34289777 ~ 34386787 (-)
ythdc1 ythdc1,LOC102794570 other upstream 772165 34611997 ~ 34679586 (-)
apc apc,LOC104937427,LOC106906682 other upstream 884044 34723876 ~ 34773434 (-)
LOC120545099 NA other upstream 985619 34825451 ~ 34844811 (-)
pisd pisd other upstream 1015924 34855756 ~ 34885749 (-)

Expression


Co-expression Network