LOC120545093 (LOC107740693)


Basic Information

Item Value
gene id LOC120545093
gene name LOC107740693
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 33854144 ~ 33856665 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779083.1
ACAGATTCAAGAGTGCAGCAAGATCGGAGGAACAAGCCATCTTTGATGGCGTGTTCATCGCGAATGATGACGACGTTGGAAGATTCGTTGACTACGTCCATACCTCAACCAGTCATGTCTCTGGAAGAGGTGTCTGTGGAGGGCAGTGGTCAGCTGCGCGTGAAACATCTCAGAAGTCGACAGGAAAAACCGATGAGGAGGGCCTGGAACTTGCTGTGTGCCGTCATGGGGTTCTCCTTCGTGCCCTCAATATGTTCAGGGGGGAGATTTTTGCCTACCCCCTGTACCTCCAAAAGCAAATGGCCTGTAAGCCAGTGACATTTTTTGCTATGGATGTGGCATGCAAGTACTGGCCTTACCTCCGGAGAGTGACAGAGAAATGCCCTGAGCTTCAGCAGCTCCTCACCATGAGgccatttctttctgtttttcatgCCAAAGCTCACGATTTCAAATGTgaggtAAAATGGAGTGGAGCGTATCAGGAAGGGGCTGGTTCGACTCTTGGGGAAGAGGTGGAGCAGTGCAATGCCTTCCTCTCGAGGATTGCTGTTACCACAAAGCACATGTCAAAAGCAGGACGCATAGACATGCTGACGGTCATGGCCATGCGCTGGaacaaacaaaagtttgacAACTTGGCTTCCACCCTTGCCCGCCGATATCGGAAGGCCACAGTAGCCCTGCAATGCCAGTTGCATAACCTGGAGGCCATGAAAACGGAAATGGACATCACAGACAATCAACTGGAAAGCTGGATCATTGATATCAATGAGTGGGCAGAAGCAACAACATCCCCAAATGATGCTGACGTTGCTGCTGTAGCCAGCCGAATTGAGGAGCTGGTGGCAAGTGTTAAGAGAAGGTCCCAGCGTCTTTATAAAGATCATGACGGATGCAAAGGACGTGCCGGATCCGCCGAAAGATCAGGgaggaaaaacaaaatttaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC107740693

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779083.1 True 950 mRNA 0.50 7 33854144 33856665

Neighbor

gene id symbol gene type direction distance location
LOC120545092 NA coding downstream 14312 33825133 ~ 33839832 (-)
ppp3ccb LOC102194384,LOC100690594,LOC101470341,LOC101074783 coding downstream 47057 33756537 ~ 33807087 (-)
LOC120545887 pbdc1 coding downstream 146434 33695376 ~ 33707710 (-)
LOC120545889 pbdc1,LOC102798581 coding downstream 169027 33683866 ~ 33685117 (-)
gfra2b gfra2,LOC106524419,LOC101468026,LOC102196137,LOC108242531 coding downstream 333893 33401741 ~ 33520251 (-)
LOC120545094 LOC107740693 coding upstream 1487 33858152 ~ 33859644 (-)
LOC120545258 NA coding upstream 11328 33867993 ~ 33870879 (-)
LOC120545096 NA coding upstream 213420 34070085 ~ 34071579 (-)
LOC120545310 NA coding upstream 314471 34171136 ~ 34173071 (-)
LOC120545302 NA coding upstream 325645 34182310 ~ 34184587 (-)
G180652 NA non-coding downstream 15425 33787839 ~ 33838719 (-)
G180654 NA non-coding downstream 29308 33824357 ~ 33824836 (-)
G180664 NA non-coding downstream 56248 33788585 ~ 33797896 (-)
G180663 NA non-coding downstream 83193 33770591 ~ 33770951 (-)
G180660 NA non-coding downstream 98893 33753581 ~ 33755251 (-)
G180675 NA non-coding upstream 5538 33862203 ~ 33862543 (-)
G180714 NA non-coding upstream 125708 33982373 ~ 33982818 (-)
G180748 NA non-coding upstream 308549 34165214 ~ 34165722 (-)
G180677 NA non-coding upstream 380248 34236913 ~ 34239131 (-)
LOC120545331 NA non-coding upstream 390823 34247488 ~ 34269083 (-)
G180665 NA other downstream 53724 33799282 ~ 33800420 (-)
G180640 NA other downstream 146506 33662176 ~ 33707638 (-)
LOC120545090 NA other downstream 175334 33304614 ~ 33678810 (-)
G180628 NA other downstream 441525 33412103 ~ 33412619 (-)
LOC120545720 NA other downstream 757915 33094069 ~ 33096229 (-)
G180765 slc25a46 other upstream 433112 34289777 ~ 34386787 (-)
ythdc1 ythdc1,LOC102794570 other upstream 755332 34611997 ~ 34679586 (-)
apc apc,LOC104937427,LOC106906682 other upstream 867211 34723876 ~ 34773434 (-)
LOC120545099 NA other upstream 968786 34825451 ~ 34844811 (-)
pisd pisd other upstream 999091 34855756 ~ 34885749 (-)

Expression


Co-expression Network