G180496


Basic Information

Item Value
gene id G180496
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 36703274 ~ 36711884 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU244596
TGTAGGTACAGCAGCTCTAAGATCACAGTCTTCACATCCACACGtcctctctccgtctgtctgatCAGCATCACGTCGTTTGTGTAGTATCTGCAGACTGCGAGCCTCCATCACTTCCTTCATCAGTCTGTTTCTGGCTTCTCTCTGCAGCCGGCTCTGCTCCTCTCGTTTACTCCACACCTCCTTCAGTTTGTCCTCCATCAGCTGCtccgtctcctcctcctccctcctctgcttCTGCAGCTCCGCTGATAAATACTGACGGTAGCGCTGCTGCTCCTCACGCAGctccacctacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacacatacacacacacacacgacagagacacacacacacacacacacacacacccacacacagacacacacacacacacacacacacacacacacacagagacacacacccacacacagagacacacacacacacacacacacacacacac

Function

GO: NA

KEGG:

id description
ko05016 Huntington disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU244596 True 537 lncRNA 0.53 3 36703274 36711884

Neighbor

gene id symbol gene type direction distance location
capslb capsl coding upstream 245742 36384013 ~ 36457532 (+)
LOC120545268 NA coding upstream 321522 36363002 ~ 36381752 (+)
LOC120545287 NA coding upstream 437599 36223794 ~ 36265675 (+)
LOC120545323 NA coding upstream 466362 36228300 ~ 36236912 (+)
LOC120545314 NA coding upstream 1043447 35645554 ~ 35659827 (+)
LOC120545293 NA coding downstream 373461 37085345 ~ 37090520 (+)
LOC120545292 NA coding downstream 413415 37125299 ~ 37134890 (+)
LOC120545871 NA coding downstream 425492 37137376 ~ 37162177 (+)
ppp1r3b NA coding downstream 478252 37190136 ~ 37202665 (+)
mfhas1 mfhas1,LOC102794566 coding downstream 493889 37205773 ~ 37253606 (+)
G180489 NA non-coding upstream 26511 36675959 ~ 36676763 (+)
G180474 NA non-coding upstream 49240 36570645 ~ 36654034 (+)
G180471 NA non-coding upstream 130148 36569651 ~ 36573126 (+)
G180452 NA non-coding upstream 222225 36480723 ~ 36481049 (+)
G180445 NA non-coding upstream 251339 36451012 ~ 36451935 (+)
G180518 NA non-coding downstream 46442 36758326 ~ 36800922 (+)
G180522 NA non-coding downstream 58754 36770638 ~ 36779002 (+)
G180527 NA non-coding downstream 84507 36796391 ~ 36805531 (+)
G180530 NA non-coding downstream 96336 36808220 ~ 36811089 (+)
G180546 NA non-coding downstream 214230 36926114 ~ 36928183 (+)
LOC120545105 ptbp3,LOC106536240 other upstream 375878 36320335 ~ 36327396 (+)
G180414 NA other upstream 525352 36176963 ~ 36177922 (+)
G180410 hsdl2 other upstream 526903 36123080 ~ 36176371 (+)
LOC120545305 NA other upstream 642751 36048606 ~ 36060523 (+)
G180382 NA other upstream 730213 35969766 ~ 35973061 (+)
LOC120545327 NA other downstream 392323 37104207 ~ 37113771 (+)

Expression


Co-expression Network