G180410 (hsdl2)


Basic Information

Item Value
gene id G180410
gene name hsdl2
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 36123080 ~ 36176371 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU244460
ACGATGGCCAAGTGCGGCATGTCCATGTGTGTCCTGGGGATGGCGAAGAGTTCAGAGGTCAGATCGCTATCAGcgccctctggcccaaaaTAGCGATCCAGACAGCAGCGATGGAGATGCTAGGTGGCGAGGGCGTGGGGAAGCAGTGCCGTACGGCTGACATCATGGCGGACGCCGCCTACGCCGTGCTGTCGCGGCCCAAAGACTACACGGGTCACTTCCTGGTGGACGAGGACGTCCTCAAGGAGACCGGGGTCCAGGACTTCCAGCAGTACGCTGTCCAGCCAGGTGAGGCTAATGCAGCTaaagctaacgctaacgctaactCAGCTAACGCTAACACTACAGGGAGAAGTAGtcagattactgcagtaaaagtagtaataccaca
>TU244462
ACGATGGCCAAGTGCGGCATGTCCATGTGTGTCCTGGGGATGGCGAAGAGTTCAGAGGTCAGATCGCTATCAGcgccctctggcccaaaaTAGCGATCCAGACAGCAGCGATGGAGATGCTAGGTGGCGAGGGCGTGGGGAAGCAGTGCCGTACGGCTGACATCATGGCGGACGCCGCCTACGCCGTGCTGTCGCGGCCCAAAGACTACACGGGTCACTTCCTGGTGGACGAGGACGTCCTCAAGGAGACCGGGGTCCAGGACTTCCAGCAGTACGCTGTCCAGCCAgGTCACCCTCTGCTGCCGGACTTCTTCCTGGGACGAAGCTCCAGAGACTCTGGTGGAGAAGATGGAGCAGCACGGGGCAACGCCCGCCTTCAAACCGGCGTCCTCATCGGCCACGCCCCCCTCCAGTGGACCAATAGAAAGCACG

Function

symbol description
hsdl2 Predicted to enable oxidoreductase activity. Predicted to be located in peroxisome. Predicted to be active in mitochondrion. Orthologous to human HSDL2 (hydroxysteroid dehydrogenase like 2).

NR:

description
hydroxysteroid dehydrogenase-like protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244460 False 391 TUCP 0.57 2 36123080 36125385
TU244462 True 432 TUCP 0.63 4 36123080 36176371

Neighbor

gene id symbol gene type direction distance location
LOC120545314 NA coding upstream 463253 35645554 ~ 35659827 (+)
LOC120545274 NA coding upstream 514961 35260196 ~ 35608119 (+)
LOC120545287 NA coding downstream 47423 36223794 ~ 36265675 (+)
LOC120545323 NA coding downstream 51929 36228300 ~ 36236912 (+)
LOC120545268 NA coding downstream 186631 36363002 ~ 36381752 (+)
capslb capsl coding downstream 207642 36384013 ~ 36457532 (+)
LOC120545293 NA coding downstream 908974 37085345 ~ 37090520 (+)
G180409 hsdl2,LOC102790414 non-coding upstream 72 36120659 ~ 36123008 (+)
G180406 NA non-coding upstream 2643 36088438 ~ 36120437 (+)
LOC120545344 NA non-coding upstream 6526 36115759 ~ 36116554 (+)
G180297 NA non-coding upstream 68970 35548777 ~ 36054110 (+)
G180387 NA non-coding upstream 112843 36009361 ~ 36010237 (+)
G180422 NA non-coding downstream 55440 36231811 ~ 36311558 (+)
LOC120545346 NA non-coding downstream 118933 36295304 ~ 36296441 (+)
G180437 NA non-coding downstream 137962 36314333 ~ 36316003 (+)
G180440 NA non-coding downstream 145911 36322282 ~ 36342369 (+)
G180445 NA non-coding downstream 274641 36451012 ~ 36451935 (+)
LOC120545305 NA other upstream 62557 36048606 ~ 36060523 (+)
G180366 NA other upstream 80653 35850922 ~ 36042427 (+)
G180382 NA other upstream 150019 35969766 ~ 35973061 (+)
LOC120545301 NA other upstream 231781 35356398 ~ 35891299 (+)
G180268 NA other upstream 1167114 34953064 ~ 34955966 (+)
G180414 NA other downstream 592 36176963 ~ 36177922 (+)
LOC120545105 ptbp3,LOC106536240 other downstream 143964 36320335 ~ 36327396 (+)
LOC120545327 NA other downstream 927836 37104207 ~ 37113771 (+)

Expression


Co-expression Network