LOC120545293


Basic Information

Item Value
gene id LOC120545293
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 37085345 ~ 37090520 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779505.1
CCTGCACCTTTGCATCTGAGGTTTCTCCATCAACACTCAGggagttatgtggaggattttccTGATGGTCAGTCTGCTCTGCTGGAGCGCTGACGGACAAGTGACCTGCAGAGACCACAACAACGGAGAAGTGGACTGGTACATCATGTACAAGGCACCCAAACTGAATAACATCGGAACTACGGGTTTGGAATATCTTTACACTGATTCAACTGGGAAGACGGAGACCTCTAAAAGTCACAATAAGCTCATCGACGATCCTAACGGTGTCCTGGCAAACACCCTGCGGCCCATTTTTAAACCAACCACATCAATGCCAAAAGACTTTGGGTTCATCACCTACAGCGACCAACCTCCAGGAAAAACAGTTCCGCAGAAGTTTGGCCACAGTAAAGGACTTGTGATGATGGAAAAAGTCAAGACAGGAGTCTGGCTCTTACACAGCACACCACAGTTCCCTTTCACAAGAGATAATAATTTCTGGCCATCCAGCGGAGCAGCAAAAGCTCAGACGTTTATCTGTGTAACATTCAAGTACAACGAATTCAAAAAGATTGGTGAACACCTGCTGGACATCGCAGCTTTCCCGTTTGATCATCAAATTCCAGCTGACTTCCATAAAGAGCTTATAGATGTTACAGAGAAGAAAAATCCACCGGGAGAGGGAATGCAGGACCTGAGatcagcagcaggaggagtgTTTCGTAGCTTTGCTAAACACAACATTGAAAACAGTATAAAGGACACCGACCCAAAAAGATTTGAAGGAGATCTTTACCTCACTATTGCAAAGGAATACGACACTGGTGTGAAAGTCCAGACCTGGGGCTGCCAGCATAAACGTGAATATTCCTACTGCGGACAACGTAATGTGTTCAATATTCCATCTGTAAAAGTTGATCTGGGTAACGGGGAGGTTAAGTGGAAGGCTAGTAACGATCATTCCAAGTGGTGTGTAGCTGAAGGTAATAATGATTTGATCTGTATCGCTGATGTAAACAGAGCAATCACCCAATACAAAAGGCCGGGGGGTGGACTGTGCTTTAACAACAAAGAGGCAAGTAATCTATTTAAAGGTCTTATTGATGATACTGACCCTTGCTCCCGTAAGCGTCCCCATGACCCTGACTGTGACCCTGATGATGATTTATAG

Function

GO:

id name namespace
GO:0006259 DNA metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779505.1 True 1153 mRNA 0.45 8 37085345 37090520

Neighbor

gene id symbol gene type direction distance location
capslb capsl coding upstream 627813 36384013 ~ 36457532 (+)
LOC120545268 NA coding upstream 703593 36363002 ~ 36381752 (+)
LOC120545287 NA coding upstream 819670 36223794 ~ 36265675 (+)
LOC120545323 NA coding upstream 848433 36228300 ~ 36236912 (+)
LOC120545314 NA coding upstream 1425518 35645554 ~ 35659827 (+)
LOC120545292 NA coding downstream 34779 37125299 ~ 37134890 (+)
LOC120545871 NA coding downstream 46856 37137376 ~ 37162177 (+)
ppp1r3b NA coding downstream 99616 37190136 ~ 37202665 (+)
mfhas1 mfhas1,LOC102794566 coding downstream 115253 37205773 ~ 37253606 (+)
rpl17 rpl17 coding downstream 171228 37261748 ~ 37268763 (+)
G180564 NA non-coding upstream 10695 37048450 ~ 37074650 (+)
G180570 NA non-coding upstream 18618 37064714 ~ 37066727 (+)
G180566 NA non-coding upstream 27017 37055622 ~ 37058328 (+)
G180491 NA non-coding upstream 88506 36680143 ~ 36996839 (+)
G180546 NA non-coding upstream 157162 36926114 ~ 36928183 (+)
G180584 NA non-coding downstream 31065 37121585 ~ 37239211 (+)
G180593 NA non-coding downstream 126933 37217453 ~ 37217726 (+)
G180594 NA non-coding downstream 129765 37220285 ~ 37221131 (+)
G180596 NA non-coding downstream 148183 37238703 ~ 37243092 (+)
G180597 NA non-coding downstream 151028 37241548 ~ 37243717 (+)
LOC120545105 ptbp3,LOC106536240 other upstream 757949 36320335 ~ 36327396 (+)
G180414 NA other upstream 907423 36176963 ~ 36177922 (+)
G180410 hsdl2 other upstream 908974 36123080 ~ 36176371 (+)
LOC120545305 NA other upstream 1024822 36048606 ~ 36060523 (+)
G180382 NA other upstream 1112284 35969766 ~ 35973061 (+)
LOC120545327 NA other downstream 13687 37104207 ~ 37113771 (+)

Expression


Co-expression Network