G180491


Basic Information

Item Value
gene id G180491
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 36680143 ~ 36996839 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU244587
TCATTTCAAAcagacattttattattatttgacagAAAACTGCATCAGTCAGGGTGTGATTTCACGAGGAACAACAGAATATAATGAGTAAGGTATAAGTCTCCtgggagaatttttttttttacaatgttatTTTACTTAATTTACACACAAAGAGAAATATATAGACATGCATTGATATGGATTAAAATGCACAGCACAGCGATCAGTTAGGTAGTTTCCAGGAGGATGACTggtacctctccagctaccagtcacCACTCACACTACCCTCTGGTCCCAATATATATTGTAAATACATTGAATCactcaacataaaaaataaaagtacaacaTGAAATGATCAACATGTTTCCACATGGCCAGAGTCTTCTGAAATATTATAGCTAGTCATTATGCATGACTACACATGAAGACACAAgggtatataatatatgatcACATATATTGATTATATTTCATGGCTGAAGTGTGAAGTGCCTCACTGCATTTAAAACCAGAGTTGTTGTCTAATCTGTTCAGTGAAGTAACCTTTGCTGATTAAACATGAAActataaaaacaaacagaaaaagtcaTTACACAATAAAGAGCGCTGTTTCCAGgaattacacatttaacatataaaaggtgattacatttttattttgttataaacATCACACTAAATACTTAATAAAGCTGTAATGAAACACATTTGATCATCAGTGTAGACCTTGTTTTCTCACAGTGATTCTAGTTCATCACTACTTCTTTGCTGTACCAGCTGCTGTTAGTTTACCAAACCCGTAGCGCTGCGCTGCTTTGATTCCTTTATCTTTATCCATTCGACTTTTTATCTCTTCcagtttcctcttcctctctgtgtctcctttCTCCTTCATCTTCTCAATCAGGAAGTCCAAGTTGTCATAAATAGACACTGAATTAACATTCAGGGCGATCTGCTCCAGTTTGACAACATGCTGAAAGGACTCTTCCAACAACTGatctttttctttctgaagTTCTGCTATCTCCTTCTCAAGAGTTTCCAGAAGGTTCTCACTTCCTGCCTTGTTATTTTCATACTTCTTCTTCAAATCTTGCAGggtcttcttctcttttcttgtcTTGTTCACATACTTCCACTCTTCTTTGACATGAGCTGACACAGAACAACCACATACAGTGCAGCGGCCACCATTCATGACCTCACAGCTTTTTGGACTCCAGGCCACTGTGCACTCAGGATAGTGACAGTTCCTCTCACACGTTTTGCAGCAGGTTGCTCCTTCATAGAACCATAACCCCCACGTCCCACCTTTGATACGTTCTTTATCTTTGTAGGGCACATCAACTTCTATAGTATAGTTCTTATCGTTCTTCAGCACTTCTTCATGTTCCTTCAGAGCTTCCTGAGTCTGTTGGATTTCTGtctgttttagatcaataaACTCAATTCTGTCTTGTGCATCTTGGATGCAGGCTGTCAGTCTGATGCGTGAATTCAACACTTCAACAGTTGTCATTAGATTTTTAGGGGAATTTTCTTTCAGGAAATCAGCAAATTGGCCAATTTGGTCCTTTGTTACTTCCCATGCACCTTTTAGagcaactttatttttctttgttttcggTGTGCTCTGGCAGTtatcaaacaggaagtgaacaGTCTCATTATCCTCATCTTTGGCACATTTAATGTTTGCAGCCTCAAGAGCATTCAGAACATTTTCAGGTGTTACACCATttgagtgtgtgatgagggCGACAATGTTCTTCTCTATGTCTTTTCCAAACAGAGAGATCACTGAATCAAAGATGTACCTCAGTCGGTCACTCAGTCGATTTTCACTCGCCTTCAGCACCAGACCCACTGCATTAATCTCATGAACTCCATCCTCTGAGTGAAACAAGTCTAATAATCTTTGACTGACGCTGGCATCTTGTTCGATCCCTCTGGTGTCTCCATAGCCAGGAGTATCGATGATGGTCAGAGAGTAGGGCAGAGTTTTATCTTCAAAACCAAAGATCTGGTACACGATCACATCTGATGTCTGACTTTCTGATTgacttctcttctcctcttctacAATCTGAAACCAGACATCATCCTCCCACTTAACTCCCATGGCGTAGTTGACCAGAGCGTTGATCAGAGTAGATTTTCCTGCTCCTGTTTCACCAACAAGTAAGATGGTTTTGTTTATCGTGTTTGGATTTCTTTCACCAAGAGTTATTCTTGTCAGAGTTCcaatcttctctttctctgttgtcAGATGTTGACGGTTCTCTATTTTTGCTCTCAGAGGTAGGATGTTCTCTTTCCTTGGTATCAGCCGATACAGAGCAGGAGATCCTGATTGGATCTGAACTTTGCAGGTGATGTTGTCATATTTGGATATGTTCCTGTAGAAAAGACATGacgataaaataaaataaat
>TU244589
TCATTTCAAAcagacattttattattatttgacagAAAACTGCATCAGTCAGGGTGTGATTTCACGAGGAACAACAGAATATAATGAGTAAGGTATAAGTCTCCtgggagaatttttttttttacaatgttatTTTACTTAATTTACACACAAAGAGAAATATATAGACATGCATTGATATGGATTAAAATGCACAGCACAGCGATCAGTTAGGTAGTTTCCAGGAGGATGACTggtacctctccagctaccagtccacttTCAGACTACCCTGTtcttcaaatatatatatttactgtgaatatatttaatcactcaaaataaaacaaagtataacatgtaagggttaatgccctgCGCGGGGGATGGTTCACACCTCGCCGTCATCCATAAATACCTGaaaatggacacctcgaagggcattaaccctcttataccatggtcacttgacaaataacatatttttaaaacaatagtttatatattaattagttttacaatcgaaatctaaagtttttacaaacaagaactTTGTTTCCCTGGTTAAGCCCTGATGGTTTGagtaatacctggaacaatcattcccatccatcaggttcttatgcaatgcaaacgttgtaaACTCCcccaggaattaggaaggaccttagatacgacttgcctcccttagcaaccggagatatttatatagtccgctcagctggtagaacccttcagtttagctacgagccagaaagctaacgctatgctagcaagatccaaagtcaataacatggTGTACAGTTAAAATagtacagtaaaaataatttgacagtatgttgaacaacaggacaagctagctatccagccatgtcattgtccccaaaacaatataacgactttcacgaagaatttgatccgcgatgtgtaacgttactgtcggctgcagctgCGCAGCCTGAAGCggcgagctgaacagtgaacgggatgtgagagaTAACGGTAtgcgctgtgaaacaaagtcagtccagaggggcagtataacttacttcttacagcctgtgtgttttagcgccatcctgtggtgttcaaaggacgagttggaaataataaatacacatttcctttttgatttaatgtagcgcattcatttagaacagtaaacagaccgtttcaccggaactcctttagtaggtgtcctacatcacgtTTTTGTCTTCTGAAATATTTAACTAGTCATTAAACATGAATACACATGAAAACACCagggtatataatatataatcacATATATTGATTATAATATATATCAAATAAAAGTTCGATTTCATGACTGAAGTGTGAAAGTTGGATTCAGCTCCAACACAGCAAACAATTTATATCTGGAAGTCTGGGGCaatctctttatctctctctctctctctctctctctctaagcagatttttttctttaaatattttacaaaagtAACCTTTAACACCAGATTTATACAAAACCATATACAGATGGGAAACTACCATAATTTTTGCCATCCTCTTTTGACCATTTTAGATAGTGCATTATACATGTACTGCAGCCCTGCCTGAACTCCTTCACATTTTCGACTTGCCATTTGTTTTAGATGGTTGACCTTCTCTGTGTCATTTTTCTTCTCCATCTCCTTAATCAGGAAGTCCAGGTGGACATAAGTAGACAGTGAAACCACATTCAGGGCGATCTCCTCCAGTTTGACAACATGCTGGTAGGCTTCATACAGCAAACGTGTTTTGTTTGCTTCAAGGGTTTCCTTCTCCTTCTGAAGACTTTCCAAAAGGTTCCCTTGCTTCTCAGTCtcttttttattcatttcataCTTTGCTTTCACATCTTTTAGAGTTTTTTGAACTTTCATTGTCTTGGTCACATACTTCCAGTTTTCTTTCACATGATCTGATGCAGGACACTTCCCGGAACATGACGTGCAGCGGCCATCTTTCATGACCTCACAGTGTCCTGGTTTCGGGGCCATTGTGCATCCAGGATAGTGACAGTTCTCCTTACAGACAGTACAGCAGGTTGCTGCTTCATAGAACACCAACCCCCACTTCCCACCATCGATACGTTCTTTATCTTTGTAAGGCACATCAACTTCTACAGTGAACTTCTCATTGTTCTTCATCTCTCGTTCATACATCTTCAGACCATCCTGAGTCTGTTGGATCTCTGTTCGCTTTAGATCAATCAACTCAATTCTGTCTTGCAGGTTTTGGATGCAGGCTGTCAGTCTGATTCGCTCGTTCAGGACATTTACAGTTGTCTCCAATCTCTGAGGTTCAGTTTCTACCAGAAAAGTTTTTGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244587 True 2425 lncRNA 0.39 2 36680143 36996839
TU244589 False 2320 lncRNA 0.39 4 36680143 36697525

Neighbor

gene id symbol gene type direction distance location
capslb capsl coding upstream 222611 36384013 ~ 36457532 (+)
LOC120545268 NA coding upstream 298391 36363002 ~ 36381752 (+)
LOC120545287 NA coding upstream 414468 36223794 ~ 36265675 (+)
LOC120545323 NA coding upstream 443231 36228300 ~ 36236912 (+)
LOC120545314 NA coding upstream 1020316 35645554 ~ 35659827 (+)
LOC120545293 NA coding downstream 88506 37085345 ~ 37090520 (+)
LOC120545292 NA coding downstream 128460 37125299 ~ 37134890 (+)
LOC120545871 NA coding downstream 140537 37137376 ~ 37162177 (+)
ppp1r3b NA coding downstream 193297 37190136 ~ 37202665 (+)
mfhas1 mfhas1,LOC102794566 coding downstream 208934 37205773 ~ 37253606 (+)
G180489 NA non-coding upstream 3380 36675959 ~ 36676763 (+)
G180474 NA non-coding upstream 26109 36570645 ~ 36654034 (+)
G180471 NA non-coding upstream 107017 36569651 ~ 36573126 (+)
G180452 NA non-coding upstream 199094 36480723 ~ 36481049 (+)
G180445 NA non-coding upstream 228208 36451012 ~ 36451935 (+)
G180564 NA non-coding downstream 51611 37048450 ~ 37074650 (+)
G180566 NA non-coding downstream 58783 37055622 ~ 37058328 (+)
G180570 NA non-coding downstream 67875 37064714 ~ 37066727 (+)
G180584 NA non-coding downstream 124746 37121585 ~ 37239211 (+)
G180593 NA non-coding downstream 220614 37217453 ~ 37217726 (+)
LOC120545105 ptbp3,LOC106536240 other upstream 352747 36320335 ~ 36327396 (+)
G180414 NA other upstream 502221 36176963 ~ 36177922 (+)
G180410 hsdl2 other upstream 503772 36123080 ~ 36176371 (+)
LOC120545305 NA other upstream 619620 36048606 ~ 36060523 (+)
G180382 NA other upstream 707082 35969766 ~ 35973061 (+)
LOC120545327 NA other downstream 107368 37104207 ~ 37113771 (+)

Expression


Co-expression Network