G180564


Basic Information

Item Value
gene id G180564
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 37048450 ~ 37074650 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU244675
aatcaggacttttagtgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagtgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagtgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggactttcatcatcgtaaaacacacttcattcaaagtggacagaaactaaataaaactaccaaaagccgtcttggttcatctttccactgttccaacaatcaccactctggtttggttgaaataaacccttaattcacccatttacatgtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244675 True 436 lncRNA 0.39 2 37048450 37074650

Neighbor

gene id symbol gene type direction distance location
capslb capsl coding upstream 590918 36384013 ~ 36457532 (+)
LOC120545268 NA coding upstream 666698 36363002 ~ 36381752 (+)
LOC120545287 NA coding upstream 782775 36223794 ~ 36265675 (+)
LOC120545323 NA coding upstream 811538 36228300 ~ 36236912 (+)
LOC120545314 NA coding upstream 1388623 35645554 ~ 35659827 (+)
LOC120545293 NA coding downstream 10695 37085345 ~ 37090520 (+)
LOC120545292 NA coding downstream 50649 37125299 ~ 37134890 (+)
LOC120545871 NA coding downstream 62726 37137376 ~ 37162177 (+)
ppp1r3b NA coding downstream 115486 37190136 ~ 37202665 (+)
mfhas1 mfhas1,LOC102794566 coding downstream 131123 37205773 ~ 37253606 (+)
G180491 NA non-coding upstream 51611 36680143 ~ 36996839 (+)
G180546 NA non-coding upstream 120267 36926114 ~ 36928183 (+)
G180530 NA non-coding upstream 237361 36808220 ~ 36811089 (+)
G180527 NA non-coding upstream 242919 36796391 ~ 36805531 (+)
G180518 NA non-coding upstream 247528 36758326 ~ 36800922 (+)
G180584 NA non-coding downstream 46935 37121585 ~ 37239211 (+)
G180593 NA non-coding downstream 142803 37217453 ~ 37217726 (+)
G180594 NA non-coding downstream 145635 37220285 ~ 37221131 (+)
G180596 NA non-coding downstream 164053 37238703 ~ 37243092 (+)
G180597 NA non-coding downstream 166898 37241548 ~ 37243717 (+)
LOC120545105 ptbp3,LOC106536240 other upstream 721054 36320335 ~ 36327396 (+)
G180414 NA other upstream 870528 36176963 ~ 36177922 (+)
G180410 hsdl2 other upstream 872079 36123080 ~ 36176371 (+)
LOC120545305 NA other upstream 987927 36048606 ~ 36060523 (+)
G180382 NA other upstream 1075389 35969766 ~ 35973061 (+)
LOC120545327 NA other downstream 29557 37104207 ~ 37113771 (+)

Expression


Co-expression Network