afg1lb


Basic Information

Item Value
gene id afg1lb
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 21427399 ~ 21457242 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782669.1
GCTGCTTGGTTTGTTTACAACCTGACAGCGGGCACTTCGTCCGTTTGGACGATATACATAATTGTAATCATTGTATTTGTATAATCCGGAACAATCGCGCTTCGCAATGTAAAGTAATTGctactaaaatgtaaaaacacaggTTATGCAACGTTCAACATGATTTAAGTGCTCaggatttaatgctcaaaataaTATTGCTTATTAAAAAAACTTAACTTAGAAAACGATAAGCGGAATATTTAATCTTATTAATAAACAATGATATAATTTAGTCATATAAACAACAGGGATCGGCCTGAAATGCAGCAGTGTGTCATGTGGTTATGCCAAATGATTGTCAATAAAGTTTTCGCGTTTTGAAACATCATGGCGGCGTACACTGTTCTTGCAGCTTTCAGATACTCAATAAATGTTTTACTAAAAGACACTGTTCTGTCCTCAAAGAATATATGCCGACTGGCAGCCATTTGCACTGGAAAAGGTTACACTAGTTGGAGGATGTGCAGTTCATCCGCATCATCCTGCTCCACTGAGTCTCCAGCAGCAGCTATCTGTGCCTTCAGTGGACACTATGATCGCCTAGTTCAGTGTGGCTCCCTGAGAAAAGATGCTCAGCAGAGAAGTGTTCTCCAGCAGCTGGCTCAGCTGCAGCACACCCTGGAGAACTACAGTAACAGCATCTACTTGAACCCACCTCCACCGAGGCTAAACTCTAAAGATGACATCAGTCAACTTCCAAAAGATAAAGAGCACCACATTACTACAGCTGATAAGAAAGATGGTGGATATGCTGCAAAGGAGGAACCTgctccaccaccaccccccAAAGGCTTCTATATCTATGGAGATGTTGGCACAGGGAAGACCATGCTCATGGATATGTTTTACTCCCGTGTGGAAAACACTCGTAAAAAGAGAGTCCACTTCAACAGCTTCATGTTGGACATCCACAAAAGGATCCATCGGAGGAAACAAAGCCTGCCAAAACGAAGGCTAGGGAAAATGTTCACCTATGACCCCATATCACCAGTTGCCATGGAGATCAGCAGTGAAACTTGCCTCTTGTGTTTTGACGAGTTTCAGGTGACCGACATTGCTGATGCCATGATCCTGAAGCAGCTGTTTGAGACACTGTTCAAGACCGGAGTGGTGGTGGTGACCACCTCCAACAGACCCCCTGATGATCTGTACAAAAACGGACTTCAGAGGAACACCTTTCTACCTTTCATCGACGTGCTGAAGGAGTACTGCCACACCATCTGCCTAGACTCTGGGATTGACTACAGGAGGCTGGACAACGGTGCAGCGGGGAAACTCTACTACCTcACAGGGGAGCCCGGTGTAGAGGCCTTTTTGGATGCGCTGTTTGAGGAGCTGGCCTTAAGTCAAGAGAGTGttaCAGGCCCTCGGTTGCTCACAGTGCTGGGCAGAGACGTGACTCTGGAAAAGACCTGTGGCTCCATCGCTGACTGCACTTTTGATGAGCTGTGTGGCAGAcctCTGGGTGCCAGTGACTACCTGGAAATGGCACGGCTCTTTGACACCGTATTCATTCGCCATGTTCCCATGCTGACACTGACCCTGAAGGACCAGGCCAGACGCTTCACCACCCTCATAGACAACTTCTATGACAACAAGGTGAGAGTGGTGCTGCTGGCGGCTTCTCCTTTAGACGGGCTGTTTGTCCACAGTGGAGGGGACAGTGAGAGGGACAGACAACTGCTGGATGACCTGGGCCTCAGCGGGGAGGCAGCGGAGCGCCTGACTCTGTTCACTGCCGAGGAGGAGATCTTTGCCTTCCAAAGGACCGTCTCCAGACTGATGGAGATGCAAACAGAGTCCTACTGGATGAAGAGAGACCGCAGTCACAGCAACAAACACGTGAACACCTAACAGCCACCCCTGCTGCCTGATGATCATATATACCTCCAGACAACACAGTACCTCACTAACTACTGACACTACACAAGAGAAGTTCCTGTTTAGCAGAAATGGAAAATATTCCAATATATCCAAGAAAGACCTGATACCCGCGGTAAATATAGAACAAAACTAGATACCGGTTTTCGATTAGGATCTGACTTACCTTTATCTTATGCATGTGTGTTATATCATTTTACGGTTTGGTCCTCTGTTGAGAGGTGTGCTCTCTCCCCCTTGTGgactatttattttaaagaataTGGAAACCTCTCCAACATGTGTGAACCACAAGGGAAACAGGTGTTTActtcagagagaggaagagggccAAGTGTCCCTCAGAGTAGTTGTAAACCGCCCTCTAGTGGGTGAAGTGGGTTCAATAGTCTCAGGCTGTTCCTGTTTTTGTATAACAATATCAGTCTCTGTAAATCTCAACCGTATACTGTAAAAACCTGGTatgaattaaaaatgttatgCATGATATTAATCCATGTATTCTATCCATCAAGCTAAATAACTGCTGCATTGGCATGGATGTATTCCAGATCTGGATTCTTAATCATATCAAGTGAACTAGTCTTGATTTTGGGGAGAGGGTGTCTTGCATAATTACAGGAAAAAGCATGCACAACTGCAAAGTGTGGTAAAACTTCAATATAATAAAATTGTCAACAAACTA

Function

NR:

description
lactation elevated protein 1 homolog B-like

GO:

id name namespace
GO:0005524 ATP binding molecular_function

KEGG:

id description
K18798 AFG1, LACE1; peroxisome-assembly ATPase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782669.1 True 2608 mRNA 0.45 13 21427399 21457242

Neighbor

gene id symbol gene type direction distance location
foxo3b LOC103370259 coding downstream 3849 21370507 ~ 21423550 (-)
cep57l1 cep57l1 coding downstream 153631 21268696 ~ 21273768 (-)
LOC120546554 NA coding downstream 179797 21239186 ~ 21247602 (-)
msgn1 msgn1 coding downstream 189573 21237154 ~ 21237826 (-)
tulp4a tulp4,LOC102779174 coding downstream 204132 21186786 ~ 21223267 (-)
nr2e1 nr2e1 coding upstream 18459 21475701 ~ 21483922 (-)
otofa NA coding upstream 68128 21525370 ~ 21612073 (-)
sod2 sod2 coding upstream 219203 21676445 ~ 21679340 (-)
tcp1 tcp1 coding upstream 235960 21693202 ~ 21698529 (-)
LOC120547355 NA coding upstream 240762 21698004 ~ 21698141 (-)
G186228 NA non-coding downstream 101806 21275919 ~ 21325593 (-)
G186130 NA non-coding downstream 254775 21168509 ~ 21172624 (-)
LOC120546177 NA non-coding downstream 261410 21159371 ~ 21165989 (-)
G186148 myct1,LOC103355010 non-coding downstream 264505 21161237 ~ 21162894 (-)
LOC120546930 NA non-coding downstream 744367 20672237 ~ 20683032 (-)
G186280 ostm1,LOC102784722 non-coding upstream 46299 21503541 ~ 21506804 (-)
G186321 NA non-coding upstream 246260 21703502 ~ 21703721 (-)
G186342 NA non-coding upstream 266381 21723623 ~ 21843619 (-)
LOC120546761 NA non-coding upstream 279614 21736856 ~ 21738348 (-)
G186343 NA non-coding upstream 279614 21736856 ~ 21760096 (-)
armc2 armc2 other downstream 78750 21326256 ~ 21348649 (-)
si:ch211-51e12.7 NA other downstream 190870 21226966 ~ 21236529 (-)
LOC120547366 NA other downstream 251871 21175338 ~ 21175528 (-)
LOC120547346 NA other downstream 254393 21172841 ~ 21173006 (-)
syne1a syne1,LOC102291171,LOC103355013,LOC102194633 other downstream 272587 21012392 ~ 21154812 (-)
prdm1c prdm1,LOC104943060 other upstream 777565 22234807 ~ 22244092 (-)
LOC120546367 LOC103362666,LOC100697912,LOC102794903,LOC104963850 other upstream 1058374 22515616 ~ 22524246 (-)
G186507 NA other upstream 1078412 22535654 ~ 22537723 (-)
G186527 LOC103362669 other upstream 1121363 22578605 ~ 22579683 (-)
LOC120546217 LOC103362670,LOC104956173,LOC101470376,LOC102796272 other upstream 1148257 22605499 ~ 22608325 (-)

Expression


Co-expression Network