LOC120547985 (ffar4)


Basic Information

Item Value
gene id LOC120547985
gene name ffar4
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 17007473 ~ 17016963 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039783848.1
GTGGATACCGGAGGGCAGCCTCACTCGTGAGTCAGAGGCATGAAAGAAACACACCAGCCAGCCTGGGTGAGGAGGGTTATTGAGATGGCGTCTTTGAAATATAAGGGTTCCCCCAGGAAAAAGCCCAACTCAGAGCTTGATGTGATTGTCAGCAGTCTAAGGAAGGAGAATGCCTATCTGAAGAAAACCCTGGTTGAGTTGTCTCGTCAACATTCAGAACATAATAAGCTCGTAGAGAGATTCCTCTCTCTTGAAACTGTTAGGCTGGAGAGTTGtcagcagctaacagctaaagATGAGAAGGTTGCATTGCTGTCAGAGCAACTGAGTAAGAAAGAAGGGAAGATGATGGACGTAGACTCCAATTCAGATGAATGGGCCTCAACCAACACCACAATAGAGCTCCAAAATCACCTCAGTTATGCCTTGGAGAAGAACAAGCAGTGGCTGGAATATGACCAGCAGAGAGAGGCCTATGTGAGGGCAACTCTGGCCAGAATGTTATGGCTGGAGAAGGAGCTGAACGAAGCCAATCAAGCCCGCTCACAGCAGCACAATGAGGACCATTCAGATGTGAGGGAGCAAATAAGCCAGATGCAGGAGCACTATGAAATACTCTTACAGAAAGCCAAAGACGAGCTGGAGGTGCTCAGGGAGCAGCTCAACATGGCCCACCAGAACCTGAAAATCACCCAAAACTGTTGCAAGGAAAGGGAGAGCGAGGTGGAAGAGCTCAAGCAGCAACTGCAGACTGAAAATATGAGCGGAAAAAGTGCGCCGGAAGATCATCATCGCTCTGAGGATGAAGAGCAATGGCTGACTGCTGAGACCGAAGACCTCCAGTGCAGACTGGATGAGGAGAAGCGCAGGTCAGCTAACTTTAAGCAGCAGTTGACTTTCTTTCAGAAGTGTTTGGGAAATTGTCACAATGAAGACCAAGAAAAGATTGTAGATCTGGAGCGACAGGCGCACCACTCAGATCATGTTGCCACCACTATTGTCGAGACCCTGGCTATCACTGCTGTCTTCCTGGTCTCCGTGACATCAAATGCGGGAGCTGCAGCCCTGGTAACCTGGGAACGCAGACTGCTGGCCAACAAGACCATCCTGACCCTCAACTTGTTTGTGGCCGACCTGCTGTTTGTCAGCCTGATCCCACTGATCGTGGCCGTGCGGTGGACTGAGTCCTGGATGCTGGGGTTTACGGCCTGTCACACTGTGCTGTATGTCATCTGTATGAGCGGCTGTGCCACCATCACCACCCTGGCCTCCATCAGTGTGGAAAGGGTCCAGGCCATTCTTCGGCTGCAACCTGTACCCATTTTAAACCGCAGGGTGGTGATTGCTACCCTCTTCTTCATCTGGGCCTTTTCTGCACTCACCTCCATACCTCTCAGTCTGTTCTTCACTGTGATGGAAGTGGATTTCCCTGAGCAGAAACGTGTACACATTTGTACTCTCAGGTGGCCCGACACAACTGCAGAGATTGTGTGGAACGTGGCCTTCACTGCCCTCTGCTTCCTTCTTCCAGGATTCATAATTGTGGTCAGTTACAGCAAAATATTACAGATTGCTAAAAGATGTAGGCTAGGGCTCCGAGACAGCCAGCCAGTTAGAGACTCTCTTGGGTACCATGTGTCCCGCCAGGATATGAAGCTCTTCCGTACCCTTCTGGTCCTTGTGCTCTCTTTCTTAATCATGTGGAGCCCTATTTTCATCATCACCTTCCTCATCCTGGCCAGGAACTTCCTAGATCACCTAGATGTTTCCTCTACCATGTTCTTCTGGGTGGTAACGTTCACACTGGCCAACTCAGCCCTCAATCCCATCCTTTACTCAGTCTGCCAGTTCAAGAACGGCTGGCGCAGGTTCTGCTGTGGCTCTGTTATAGTACCACTGAGAAAAGGACCTCGCAGCAGTGGTCAAGTGCAAGGGATACATCTATGATTATCATGATTGTTTTGTCAAATAGAGGATTCAAACTTACATAAAGCGTTCAGCACATGGTCCACACCTCCGGTGACATGATATACCTCTTGTGTAATATACAATGCTCGCTTGtaattattatatttaaataCAGAAATTATTTCATACTAATATGAGATTGAAACGCCTGTGAAAGAGCAAACACTGTAAAGATAGGTAATTTTATAATAAATCATtgcttttttgtga
>XM_039783849.1
CCGGAGGGCAGCCTCACTCGTGAGTCAGAGGCATGAAAGAAACACACCAGCCAGCCTGGGTGAGGAGGtcccttttaatatttgttaacaGGTTATTGAGATGGCGTCTTTGAAATATAAGGGTTCCCCCAGGAAAAAGCCCAACTCAGAGCTTGATGTGATTGTCAGCAGTCTAAGGAAGGAGAATGCCTATCTGAAGAAAACCCTGGTTGAGTTGTCTCGTCAACATTCAGAACATAATAAGCTCGTAGAGAGATTCCTCTCTCTTGAAACTGTTAGGCTGGAGAGTTGtcagcagctaacagctaaagATGAGAAGGTTGCATTGCTGTCAGAGCAACTGAGTAAGAAAGAAGGGAAGATGATGGACGTAGACTCCAATTCAGATGAATGGGCCTCAACCAACACCACAATAGAGCTCCAAAATCACCTCAGTTATGCCTTGGAGAAGAACAAGCAGTGGCTGGAATATGACCAGCAGAGAGAGGCCTATGTGAGGGCAACTCTGGCCAGAATGTTATGGCTGGAGAAGGAGCTGAACGAAGCCAATCAAGCCCGCTCACAGCAGCACAATGAGGACCATTCAGATGTGAGGGAGCAAATAAGCCAGATGCAGGAGCACTATGAAATACTCTTACAGAAAGCCAAAGACGAGCTGGAGGTGCTCAGGGAGCAGCTCAACATGGCCCACCAGAACCTGAAAATCACCCAAAACTGTTGCAAGGAAAGGGAGAGCGAGGTGGAAGAGCTCAAGCAGCAACTGCAGACTGAAAATATGAGCGGAAAAAGTGCGCCGGAAGATCATCATCGCTCTGAGGATGAAGAGCAATGGCTGACTGCTGAGACCGAAGACCTCCAGTGCAGACTGGATGAGGAGAAGCGCAGGTCAGCTAACTTTAAGCAGCAGTTGACTTTCTTTCAGAAGTGTTTGGGAAATTGTCACAATGAAGACCAAGAAAAGATTGTAGATCTGGAGCGACAGGCGCACCACTCAGATCATGTTGCCACCACTATTGTCGAGACCCTGGCTATCACTGCTGTCTTCCTGGTCTCCGTGACATCAAATGCGGGAGCTGCAGCCCTGGTAACCTGGGAACGCAGACTGCTGGCCAACAAGACCATCCTGACCCTCAACTTGTTTGTGGCCGACCTGCTGTTTGTCAGCCTGATCCCACTGATCGTGGCCGTGCGGTGGACTGAGTCCTGGATGCTGGGGTTTACGGCCTGTCACACTGTGCTGTATGTCATCTGTATGAGCGGCTGTGCCACCATCACCACCCTGGCCTCCATCAGTGTGGAAAGGGTCCAGGCCATTCTTCGGCTGCAACCTGTACCCATTTTAAACCGCAGGGTGGTGATTGCTACCCTCTTCTTCATCTGGGCCTTTTCTGCACTCACCTCCATACCTCTCAGTCTGTTCTTCACTGTGATGGAAGTGGATTTCCCTGAGCAGAAACGTGTACACATTTGTACTCTCAGGTGGCCCGACACAACTGCAGAGATTGTGTGGAACGTGGCCTTCACTGCCCTCTGCTTCCTTCTTCCAGGATTCATAATTGTGGTCAGTTACAGCAAAATATTACAGATTGCTAAAAGATGTAGGCTAGGGCTCCGAGACAGCCAGCCAGTTAGAGACTCTCTTGGGTACCATGTGTCCCGCCAGGATATGAAGCTCTTCCGTACCCTTCTGGTCCTTGTGCTCTCTTTCTTAATCATGTGGAGCCCTATTTTCATCATCACCTTCCTCATCCTGGCCAGGAACTTCCTAGATCACCTAGATGTTTCCTCTACCATGTTCTTCTGGGTGGTAACGTTCACACTGGCCAACTCAGCCCTCAATCCCATCCTTTACTCAGTCTGCCAGTTCAAGAACGGCTGGCGCAGGTTCTGCTGTGGCTCTGTTATAGTACCACTGAGAAAAGGACCTCGCAGCAGTGGTCAAGTGCAAGGGATACATCTATGATTATCATGATTGTTTTGTCAAATAGAGGATTCAAACTTACATAAAGCGTTCAGCACATGGTCCACACCTCCGGTGACATGATATACCTCTTGTGTAATATACAATGCTCGCTTGtaattattatatttaaataCAGAAATTATTTCATACTAATATGAGATTGAAACGCCTGTGAAAGAGCAAACACTGTAAAGATAGGTAATTTTATAATAAATCATtgcttttttgtga
>XM_039783850.1
GTGGATACCGGAGGGCAGCCTCACTCGTGAGTCAGAGGCATGAAAGAAACACACCAGCCAGCCTGGGTGAGGAGGGTTATTGAGATGGCGTCTTTGAAATATAAGGGTTCCCCCAGGAAAAAGCCCAACTCAGAGCTTGATGTGATTGTCAGCAGTCTAAGGAAGGAGAATGCCTATCTGAAGAAAACCCTGGTTGAGTTGTCTCGTCAACATTCAGAACATAATAAGCTCGTAGAGGACTCCAATTCAGATGAATGGGCCTCAACCAACACCACAATAGAGCTCCAAAATCACCTCAGTTATGCCTTGGAGAAGAACAAGCAGTGGCTGGAATATGACCAGCAGAGAGAGGCCTATGTGAGGGCAACTCTGGCCAGAATGTTATGGCTGGAGAAGGAGCTGAACGAAGCCAATCAAGCCCGCTCACAGCAGCACAATGAGGACCATTCAGATGTGAGGGAGCAAATAAGCCAGATGCAGGAGCACTATGAAATACTCTTACAGAAAGCCAAAGACGAGCTGGAGGTGCTCAGGGAGCAGCTCAACATGGCCCACCAGAACCTGAAAATCACCCAAAACTGTTGCAAGGAAAGGGAGAGCGAGGTGGAAGAGCTCAAGCAGCAACTGCAGACTGAAAATATGAGCGGAAAAAGTGCGCCGGAAGATCATCATCGCTCTGAGGATGAAGAGCAATGGCTGACTGCTGAGACCGAAGACCTCCAGTGCAGACTGGATGAGGAGAAGCGCAGGTCAGCTAACTTTAAGCAGCAGTTGACTTTCTTTCAGAAGTGTTTGGGAAATTGTCACAATGAAGACCAAGAAAAGATTGTAGATCTGGAGCGACAGGCGCACCACTCAGATCATGTTGCCACCACTATTGTCGAGACCCTGGCTATCACTGCTGTCTTCCTGGTCTCCGTGACATCAAATGCGGGAGCTGCAGCCCTGGTAACCTGGGAACGCAGACTGCTGGCCAACAAGACCATCCTGACCCTCAACTTGTTTGTGGCCGACCTGCTGTTTGTCAGCCTGATCCCACTGATCGTGGCCGTGCGGTGGACTGAGTCCTGGATGCTGGGGTTTACGGCCTGTCACACTGTGCTGTATGTCATCTGTATGAGCGGCTGTGCCACCATCACCACCCTGGCCTCCATCAGTGTGGAAAGGGTCCAGGCCATTCTTCGGCTGCAACCTGTACCCATTTTAAACCGCAGGGTGGTGATTGCTACCCTCTTCTTCATCTGGGCCTTTTCTGCACTCACCTCCATACCTCTCAGTCTGTTCTTCACTGTGATGGAAGTGGATTTCCCTGAGCAGAAACGTGTACACATTTGTACTCTCAGGTGGCCCGACACAACTGCAGAGATTGTGTGGAACGTGGCCTTCACTGCCCTCTGCTTCCTTCTTCCAGGATTCATAATTGTGGTCAGTTACAGCAAAATATTACAGATTGCTAAAAGATGTAGGCTAGGGCTCCGAGACAGCCAGCCAGTTAGAGACTCTCTTGGGTACCATGTGTCCCGCCAGGATATGAAGCTCTTCCGTACCCTTCTGGTCCTTGTGCTCTCTTTCTTAATCATGTGGAGCCCTATTTTCATCATCACCTTCCTCATCCTGGCCAGGAACTTCCTAGATCACCTAGATGTTTCCTCTACCATGTTCTTCTGGGTGGTAACGTTCACACTGGCCAACTCAGCCCTCAATCCCATCCTTTACTCAGTCTGCCAGTTCAAGAACGGCTGGCGCAGGTTCTGCTGTGGCTCTGTTATAGTACCACTGAGAAAAGGACCTCGCAGCAGTGGTCAAGTGCAAGGGATACATCTATGATTATCATGATTGTTTTGTCAAATAGAGGATTCAAACTTACATAAAGCGTTCAGCACATGGTCCACACCTCCGGTGACATGATATACCTCTTGTGTAATATACAATGCTCGCTTGtaattattatatttaaataCAGAAATTATTTCATACTAATATGAGATTGAAACGCCTGTGAAAGAGCAAACACTGTAAAGATAGGTAATTTTATAATAAATCATtgcttttttgtga
>XM_039783851.1
GGATACCGGAGGGCAGCCTCACTCGTGAGTCAGAGGCATGAAAGAAACACACCAGCCAGCCTGGGTGAGGAGGGACTCCAATTCAGATGAATGGGCCTCAACCAACACCACAATAGAGCTCCAAAATCACCTCAGTTATGCCTTGGAGAAGAACAAGCAGTGGCTGGAATATGACCAGCAGAGAGAGGCCTATGTGAGGGCAACTCTGGCCAGAATGTTATGGCTGGAGAAGGAGCTGAACGAAGCCAATCAAGCCCGCTCACAGCAGCACAATGAGGACCATTCAGATGTGAGGGAGCAAATAAGCCAGATGCAGGAGCACTATGAAATACTCTTACAGAAAGCCAAAGACGAGCTGGAGGTGCTCAGGGAGCAGCTCAACATGGCCCACCAGAACCTGAAAATCACCCAAAACTGTTGCAAGGAAAGGGAGAGCGAGGTGGAAGAGCTCAAGCAGCAACTGCAGACTGAAAATATGAGCGGAAAAAGTGCGCCGGAAGATCATCATCGCTCTGAGGATGAAGAGCAATGGCTGACTGCTGAGACCGAAGACCTCCAGTGCAGACTGGATGAGGAGAAGCGCAGGTCAGCTAACTTTAAGCAGCAGTTGACTTTCTTTCAGAAGTGTTTGGGAAATTGTCACAATGAAGACCAAGAAAAGATTGTAGATCTGGAGCGACAGGCGCACCACTCAGATCATGTTGCCACCACTATTGTCGAGACCCTGGCTATCACTGCTGTCTTCCTGGTCTCCGTGACATCAAATGCGGGAGCTGCAGCCCTGGTAACCTGGGAACGCAGACTGCTGGCCAACAAGACCATCCTGACCCTCAACTTGTTTGTGGCCGACCTGCTGTTTGTCAGCCTGATCCCACTGATCGTGGCCGTGCGGTGGACTGAGTCCTGGATGCTGGGGTTTACGGCCTGTCACACTGTGCTGTATGTCATCTGTATGAGCGGCTGTGCCACCATCACCACCCTGGCCTCCATCAGTGTGGAAAGGGTCCAGGCCATTCTTCGGCTGCAACCTGTACCCATTTTAAACCGCAGGGTGGTGATTGCTACCCTCTTCTTCATCTGGGCCTTTTCTGCACTCACCTCCATACCTCTCAGTCTGTTCTTCACTGTGATGGAAGTGGATTTCCCTGAGCAGAAACGTGTACACATTTGTACTCTCAGGTGGCCCGACACAACTGCAGAGATTGTGTGGAACGTGGCCTTCACTGCCCTCTGCTTCCTTCTTCCAGGATTCATAATTGTGGTCAGTTACAGCAAAATATTACAGATTGCTAAAAGATGTAGGCTAGGGCTCCGAGACAGCCAGCCAGTTAGAGACTCTCTTGGGTACCATGTGTCCCGCCAGGATATGAAGCTCTTCCGTACCCTTCTGGTCCTTGTGCTCTCTTTCTTAATCATGTGGAGCCCTATTTTCATCATCACCTTCCTCATCCTGGCCAGGAACTTCCTAGATCACCTAGATGTTTCCTCTACCATGTTCTTCTGGGTGGTAACGTTCACACTGGCCAACTCAGCCCTCAATCCCATCCTTTACTCAGTCTGCCAGTTCAAGAACGGCTGGCGCAGGTTCTGCTGTGGCTCTGTTATAGTACCACTGAGAAAAGGACCTCGCAGCAGTGGTCAAGTGCAAGGGATACATCTATGATTATCATGATTGTTTTGTCAAATAGAGGATTCAAACTTACATAAAGCGTTCAGCACATGGTCCACACCTCCGGTGACATGATATACCTCTTGTGTAATATACAATGCTCGCTTGtaattattatatttaaataCAGAAATTATTTCATACTAATATGAGATTGAAACGCCTGTGAAAGAGCAAACACTGTAAAGATAGGTAATTTTATAATAAATCATtgcttttttgtga

Function

symbol description
ffar4 Enables arrestin family protein binding activity. Involved in several processes, including negative regulation of interleukin-1 beta production; positive regulation of cytosolic calcium ion concentration; and white fat cell differentiation. Located in bounding membrane of organelle; cilium; and plasma membrane. Implicated in obesity.

NR:

description
PREDICTED: free fatty acid receptor 4

GO: NA

KEGG:

id description
K08425 FFAR4, GPR120; free fatty acid receptor 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039783848.1 False 2178 mRNA 0.48 11 17007473 17016963
XM_039783849.1 True 2194 mRNA 0.48 11 17007480 17016963
XM_039783850.1 False 2058 mRNA 0.48 10 17007473 17016963
XM_039783851.1 False 1894 mRNA 0.49 9 17007475 17016963

Neighbor

gene id symbol gene type direction distance location
c19h10orf53 LOC102787124,LOC104962667 coding upstream 71420 16935565 ~ 16936053 (+)
chata chat coding upstream 72786 16926549 ~ 16934687 (+)
slc18a3a slc18a3,LOC102786515,LOC102201752,LOC105416362 coding upstream 81539 16923301 ~ 16925934 (+)
rgra rgr,LOC101074252,LOC104942455 coding upstream 96418 16903375 ~ 16911055 (+)
cdhr1a LOC102200236,LOC102293321,LOC101466539,LOC100690479,LOC108242829,LOC101155712,LOC106515358,LOC106904704,LOC103147748 coding upstream 130041 16864592 ~ 16877432 (+)
LOC120547984 LOC104930316,LOC103360614,LOC104964615 coding downstream 1068 17018031 ~ 17024966 (+)
LOC120547963 LOC104930305,LOC103360621,LOC104964613 coding downstream 10966 17027929 ~ 17033153 (+)
tp53bp2a tp53bp2 coding downstream 115315 17132278 ~ 17164831 (+)
sema4ga LOC103360628 coding downstream 151163 17168126 ~ 17196374 (+)
lzts2a LOC104943164,LOC103360630,LOC103387202 coding downstream 197864 17214827 ~ 17262536 (+)
G194261 LOC104930511,LOC102783363,LOC103355139 non-coding upstream 388881 16616810 ~ 16618592 (+)
G194257 NA non-coding upstream 393630 16608474 ~ 16613843 (+)
G194254 LOC103355137,LOC104930531 non-coding upstream 402413 16591475 ~ 16605060 (+)
G194231 rps24,LOC102780737 non-coding upstream 453985 16547481 ~ 16553488 (+)
LOC120548058 NA non-coding upstream 648111 16357895 ~ 16359362 (+)
G194375 NA non-coding downstream 21323 17038286 ~ 17039656 (+)
G194445 NA non-coding downstream 246959 17263922 ~ 17289530 (+)
G194451 NA non-coding downstream 283478 17300441 ~ 17302122 (+)
G194469 NA non-coding downstream 389912 17406875 ~ 17409080 (+)
G194485 NA non-coding downstream 414608 17431571 ~ 17431863 (+)
G194325 LOC102785938,LOC102201169,LOC100696907,LOC101467692,LOC101074032 other upstream 116523 16889400 ~ 16890950 (+)
hif1an hif1an other upstream 348396 16649868 ~ 16659077 (+)
trmt2b trmt2b other upstream 382376 16620024 ~ 16625097 (+)
G194185 NA other upstream 653642 16353191 ~ 16353831 (+)
lrmda clg13h10orf11,LOC102312243,LOC101474007,LOC106515339,LOC102208092 other upstream 877806 15912762 ~ 16129667 (+)
slc25a16 slc25a16 other downstream 468405 17485368 ~ 17494350 (+)
hpse2 hpse2,LOC102781816 other downstream 1042381 18059344 ~ 18115844 (+)
wu:fc17b08 LOC103355820 other downstream 1133768 18150731 ~ 18197092 (+)
prdm8 LOC104947267,LOC103357713 other downstream 1663994 18680957 ~ 18684337 (+)
G194908 NA other downstream 1827467 18844430 ~ 18850903 (+)

Expression


Co-expression Network