G199485


Basic Information

Item Value
gene id G199485
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 1954438 ~ 2033537 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU270456
gtgtgtgtgtgtgtgtgtgtgtgtggggattgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtttttgagtagtgtgtgtgtgttgtgtgtgtgtgtttgtgtgtgtgtttgcatgtgtgtctgtctttgtgtgtgtgtgtgtgtctgtttgtgtgtctgtgtgtgtgtatatgtgtgtgtgtgtttgcgtgtgtgcatgtgtgtgtttgcaaaataaaacatgaatagctgaattgctaaagctaaactggatgaatagcttaaaaccgtaaaaataagttgaagtagtgagagtagttgaaaagtcaaataacaccttagccagggacacactgattgatatgccacagtgggatttgaacccgggccacccacaccctagccatgtgccataaccactgcgccatcttcagaacagacaaacattgttcctttagtatttataaagcatctcTTGGACCATTAATCCCCACACCTgattagtgagagacagtgtgagagaacccttcaaacaatccttaataaatccacaacagtacatgctatcaaaacagcgacttgaccgttagagacacaaggcctttgtgaacgtatcggtataaaatttatatggataaacataaaaatgtgggcatgtcagcgatttaaaaaagtggttcgttcagtgtttcgctgggaaatatccacgagttttaacattggagccaatggagaaagatttggacatcttgtcatttggaagctcaaccagccaaaagtaaaaggcgtatcacaaaactgagcagatcttctgaaactagacaaaaatacctacgttttgatgtataaattgtgtatgacaagtagatattgtgggcgtgagagcagtttacagacaaggaactaagataattttttcgaagcttcaccctctagctgtgatgtcatccactctagcaaacgcaatacacaccctgtttaatcgataaaatttcatgaaataatcactaaacttaaacagatttttcacaaaaactgtaaaatatatcaacctgaaaagtagaccccagatagctgaatattttgtgaacagtttaaagtttgaattacgtgtgtaggtggaagaatgtaggaggagatacattttgaagcagaagaagattttaaggagttgaaccctgctctcattgactttaatgttaaaaaaaagtgttaaaaagcttaaaattttaaaaagtataaatagtagaaaaaaagttgaagaagtcccatcattagctgaaagagctgaacatttgaaaagttgaatggtttaaataggtgaaagtatgcagaagttacagagagccaaaaaacgtacggaagagggaa
>TU270459
gtgtgtgtgtgtgtgtgtgtgtgtggggattgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtttttgagtagtgtgtgtgtgttgtgtgtgtgtgtttgtgtgtgtgtttgcgtgtgtgtctgtctttgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtttatgtgtctgtttgtgtgtctgtgtgtgtgtatatgtgtgtgtgtgtttgcgtgtgtgcatgtgtgtgtttgcaaaataaaacatgaatagctgaattgctaaagctaaactggatgaatagcttaaaaccgtaaaaataagttgaagtagtgagagtagttgaaaagtcaaataacaccttAGCCAGGGACACACTGATTAATATAccacagtgggatttgaacccgggccccccacaccctagccatgtgccataaccactgcgccatctgcagaacagacaaacattgttcctttagtatttataaagcatctctttgatcattaatccccacacctaattagtgagagacagtgtgagagaacccttcaaacaatccttaataaatccacaacagtacatgctatcgaaacagcgacttgaccgttagagacacaaggcctttgtgaacgtatcggtataaaatttatatggataaacataaaaatgtgggcatgtcagcaatttaaa
>TU270462
tttttttattttttcccctctagctgtgatgtcatccactctagcaaacgcaatacacaccctgtttaatcgataaaatttcatgaaataatcactaaacttaaacagatttttcacaaaaactgtaaaatatatcaacctgaaaagtagaccccagatagctgaatattttgtgaacagtttaaagtttgaattacgtgtgtaggtggaagaatgtaggaggagatacattttgaagcagaagaagattttaaggagttgaaccctgctctcattgactttaatgttaaaaaaaagtgttaaaaagcttaaaattttaaaaagtataaatagtagaaaaaaagttgaagaagtcccatcattagctgaaagagctgaacatttgaaaagttgaatggtttaaataggtgaaagtatgcagaagttacagagagccaaaaaacgtacggaagagggaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU270456 True 1353 lncRNA 0.38 5 1954438 2033537
TU270459 False 676 lncRNA 0.41 3 1954438 1960408
TU270462 False 458 lncRNA 0.32 2 2009676 2033537

Neighbor

gene id symbol gene type direction distance location
LOC120549988 NA coding upstream 70626 1883694 ~ 1883812 (+)
LOC120550216 NA coding upstream 70848 1883472 ~ 1883590 (+)
LOC120550217 NA coding upstream 72825 1881494 ~ 1881613 (+)
LOC120550109 NA coding upstream 73049 1881271 ~ 1881389 (+)
LOC120550192 NA coding upstream 73272 1881048 ~ 1881166 (+)
LOC120548871 NA coding downstream 108635 2142172 ~ 2152961 (+)
LOC120548873 NA coding downstream 228656 2262193 ~ 2264878 (+)
LOC120548876 NA coding downstream 397769 2431306 ~ 2432865 (+)
LOC120549189 NA coding downstream 434417 2467954 ~ 2470455 (+)
LOC120548878 NA coding downstream 479974 2513511 ~ 2514641 (+)
G199484 NA non-coding upstream 2767 1950465 ~ 1951671 (+)
LOC120550139 NA non-coding upstream 190564 1763756 ~ 1763874 (+)
LOC120550123 NA non-coding upstream 190787 1763533 ~ 1763651 (+)
LOC120549993 NA non-coding upstream 191231 1763089 ~ 1763207 (+)
LOC120550194 NA non-coding upstream 202628 1751692 ~ 1751810 (+)
G199523 NA non-coding downstream 12321 2045858 ~ 2046300 (+)
LOC120548660 NA non-coding downstream 22303 2055840 ~ 2091662 (+)
G199541 NA non-coding downstream 64681 2098218 ~ 2100434 (+)
G199549 NA non-coding downstream 72535 2106072 ~ 2106368 (+)
G199551 NA non-coding downstream 75958 2109495 ~ 2109822 (+)
LOC120549526 NA other upstream 853034 1099584 ~ 1101404 (+)
G199306 NA other upstream 962426 963109 ~ 992012 (+)
LOC120549207 NA other upstream 1903552 27895 ~ 50886 (+)
G199564 NA other downstream 125353 2158890 ~ 2159383 (+)
G199652 NA other downstream 514448 2547985 ~ 2548539 (+)
G199689 NA other downstream 658936 2692473 ~ 2693453 (+)
G199885 NA other downstream 1462543 3496080 ~ 3523889 (+)
LOC120549013 NA other downstream 2989121 5022658 ~ 5024934 (+)

Expression


Co-expression Network