LOC120548878


Basic Information

Item Value
gene id LOC120548878
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 2513511 ~ 2514641 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039785393.1
GGTGGAACAGTACGTATTACATGCTGGAAAGCCTTTTTGCACAAAAGCGAGTCCTGGCTTCATACATTGCCGATCATGATCTCCCCGCGACATTCAGCGCATACCAGTGGGTTTTAATAGAGaacattctctctctccttgcccCCTTTGAGCAGATAACGAAGGAGATAAGCTCATCGGGTGCATCTGTGGCAGACGTTATCCCCTTACTAGCAGCATTAAAGCGTCTTTTAGGCAAAGAGGCTGAAACAGACCACGGAGTGAGAACAACAAAAAGTGCGCTCTTAGATGCTGTGAACACTCGTTTTAGCAAGGCAGATTCCGAACCGCTGTACTGCATCGCGACAGTACTTGATCCAAGATATAAGGATCCTTACTTGGATGGGGGGAAAAAGCAGCGCACAAGGGACATGATACAGGCTGAGTTGGATTTGCAAAAGCCGTTGTGTGATGGAGACGGTCGCATGACGCACAGCGCAGCAGAACGGGGAGATGGCGTGGAGAAAAAAAGGGCACGCACTACAGATGATGAGCTGCGCAAACCCTTACTGTCTGACATGTTCGAAGAGATTCTCCAAGAGAGCAATCCAAATACCAGTCAGAAGACAAGCTCAACAGCTCAACAACTGGATGCTTTTCTATCAGAAGTCCCCATCCCCAGGAGCAATAACCCTCTCGGATATTGGAGGGCCAATCAAGGCCGCTTTCCCCACCTGGCACAGACGGCACGCAGATACTTGTCTGCTCCATGCACAAGCACCGATAGCGAGAGACTGTTTAGCGCTGCTTCTCACATCATCGATGAGAAGAGGAACAGACTTTCATGTGACAAAGCAGAGAAGCTCCTTTTCATCAAGAAGAACCTGCCACTTTTCCTGAAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039785393.1 True 884 mRNA 0.49 2 2513511 2514641

Neighbor

gene id symbol gene type direction distance location
LOC120549189 NA coding upstream 43056 2467954 ~ 2470455 (+)
LOC120548876 NA coding upstream 80646 2431306 ~ 2432865 (+)
LOC120548873 NA coding upstream 248633 2262193 ~ 2264878 (+)
LOC120548871 NA coding upstream 360550 2142172 ~ 2152961 (+)
LOC120549988 NA coding upstream 629699 1883694 ~ 1883812 (+)
yipf6 yipf6,LOC102784508 coding downstream 723982 3238623 ~ 3243462 (+)
im:7136021 LOC103129910,LOC103458072,LOC108228217 coding downstream 744894 3259535 ~ 3274871 (+)
LOC120548881 NA coding downstream 830175 3344816 ~ 3345584 (+)
ak7b NA coding downstream 855158 3369799 ~ 3384604 (+)
vrk1 vrk1 coding downstream 986730 3501371 ~ 3522832 (+)
LOC120549194 NA non-coding upstream 13577 2497469 ~ 2499934 (+)
G199630 NA non-coding upstream 22881 2490430 ~ 2490630 (+)
G199593 NA non-coding upstream 88018 2424525 ~ 2425493 (+)
LOC120549196 NA non-coding upstream 106247 2405776 ~ 2407264 (+)
G199576 NA non-coding upstream 242646 2247510 ~ 2270865 (+)
G199650 NA non-coding downstream 27779 2542420 ~ 2542633 (+)
LOC120549192 NA non-coding downstream 74078 2588719 ~ 2591784 (+)
G199694 NA non-coding downstream 184008 2698649 ~ 2699027 (+)
G199695 NA non-coding downstream 184552 2699193 ~ 2699605 (+)
G199699 NA non-coding downstream 296062 2810703 ~ 2811103 (+)
G199564 NA other upstream 354128 2158890 ~ 2159383 (+)
LOC120549526 NA other upstream 1412107 1099584 ~ 1101404 (+)
G199306 NA other upstream 1521499 963109 ~ 992012 (+)
LOC120549207 NA other upstream 2462625 27895 ~ 50886 (+)
G199652 NA other downstream 33344 2547985 ~ 2548539 (+)
G199689 NA other downstream 177832 2692473 ~ 2693453 (+)
G199885 NA other downstream 981439 3496080 ~ 3523889 (+)
LOC120549013 NA other downstream 2508017 5022658 ~ 5024934 (+)
G200129 NA other downstream 2527318 5041959 ~ 5053742 (+)

Expression


Co-expression Network