LOC120549196


Basic Information

Item Value
gene id LOC120549196
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 2405776 ~ 2407264 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005637345.1
TTGATGGAGAGCCAGACCATCTTGTACCTTCGTCCTCTGCATTCCTTGTTGAGAGTGACCTGTTTCTGATGGCAGGCTGCATGATTGGTCATTGCTTTTTGCATGGAGGTCCTCCACTGACAGGCCTAAGCCCTGCGATTGTTCACATCCTGTGTGGGGGCACAGTTGAAACCACCATCATACAAATCAATGACTGTCCAGACATTGATCTGCGGGAGAAAATTACACTGCTTGAAGGGAGTTCTGAACTCTCAGCTGATGAAAAGGAGAGCCTTGACAACTTGTGTCTTGCATGGGACCTTCCTTTGATGACAGAAAACAACCGAAGATGGCTCTTTGAAAGGCCTCTATGTCATGCGGTCATTGGAAGGTTCATGAGGCAAATAAAGCAAATAAGAAAAGGGCTTAAAGAACCATGTTGTGGCCACTCATTAGTGAACGTCCAGATGTAGCTCCAGTGATTTTCCCTCGGGAGTCAAGGGCTGTCTTGACCCCACAGTGCATTCTGGAACGCATCTGCTGGCCTACAATGACTGATGAGGACGACGACAATGAATGCTCTGTGATGGATAAGAGCCGCATCACGTGGTACCTTCGCCGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005637345.1 True 602 lncRNA 0.48 4 2405776 2407264

Neighbor

gene id symbol gene type direction distance location
LOC120548873 NA coding upstream 140898 2262193 ~ 2264878 (+)
LOC120548871 NA coding upstream 252815 2142172 ~ 2152961 (+)
LOC120549988 NA coding upstream 521964 1883694 ~ 1883812 (+)
LOC120550216 NA coding upstream 522186 1883472 ~ 1883590 (+)
LOC120550217 NA coding upstream 524163 1881494 ~ 1881613 (+)
LOC120548876 NA coding downstream 24042 2431306 ~ 2432865 (+)
LOC120549189 NA coding downstream 60690 2467954 ~ 2470455 (+)
LOC120548878 NA coding downstream 106247 2513511 ~ 2514641 (+)
yipf6 yipf6,LOC102784508 coding downstream 831359 3238623 ~ 3243462 (+)
im:7136021 LOC103129910,LOC103458072,LOC108228217 coding downstream 852271 3259535 ~ 3274871 (+)
G199576 NA non-coding upstream 134911 2247510 ~ 2270865 (+)
G199577 NA non-coding upstream 139793 2265576 ~ 2265983 (+)
G199575 NA non-coding upstream 158511 2246954 ~ 2247265 (+)
G199570 NA non-coding upstream 210409 2195128 ~ 2195367 (+)
LOC120549790 NA non-coding upstream 264017 2139562 ~ 2141759 (+)
G199593 NA non-coding downstream 17261 2424525 ~ 2425493 (+)
G199630 NA non-coding downstream 83166 2490430 ~ 2490630 (+)
LOC120549194 NA non-coding downstream 90205 2497469 ~ 2499934 (+)
G199650 NA non-coding downstream 135156 2542420 ~ 2542633 (+)
LOC120549192 NA non-coding downstream 181455 2588719 ~ 2591784 (+)
G199564 NA other upstream 246393 2158890 ~ 2159383 (+)
LOC120549526 NA other upstream 1304372 1099584 ~ 1101404 (+)
G199306 NA other upstream 1413764 963109 ~ 992012 (+)
LOC120549207 NA other upstream 2354890 27895 ~ 50886 (+)
G199652 NA other downstream 140721 2547985 ~ 2548539 (+)
G199689 NA other downstream 285209 2692473 ~ 2693453 (+)
G199885 NA other downstream 1088816 3496080 ~ 3523889 (+)
LOC120549013 NA other downstream 2615394 5022658 ~ 5024934 (+)
G200129 NA other downstream 2634695 5041959 ~ 5053742 (+)

Expression


Co-expression Network