LOC120548660


Basic Information

Item Value
gene id LOC120548660
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 2055840 ~ 2091662 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005637235.1
agaatagaatctacgcacagttttataaatgaggccccaggtctATTACTTTTTCTTCTACGCCAaattgttttgtctgttgtcacgTTGACTCAGTGAAACGTCTGCTGCAACAGTGTCTCCCTGTTACAAACCCGATCCTTCCTGTAACGGAACCGGGTTGAGTGTTGCTGCTGGACAGTAGCTGCCTCGCAGCTGCTCACCTCCCAGGTCTCACAGCGCCCCCAGCAGGCGTCAGTGGTGATGTGCAGGCCCCCGCAGCCGGGCTTCCTGGCCAGGAAGGTGAACTCCCGCACGGCACAACCAATGA

Function

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005637235.1 True 310 lncRNA 0.54 3 2055840 2091662

Neighbor

gene id symbol gene type direction distance location
LOC120549988 NA coding upstream 172028 1883694 ~ 1883812 (+)
LOC120550216 NA coding upstream 172250 1883472 ~ 1883590 (+)
LOC120550217 NA coding upstream 174227 1881494 ~ 1881613 (+)
LOC120550109 NA coding upstream 174451 1881271 ~ 1881389 (+)
LOC120550192 NA coding upstream 174674 1881048 ~ 1881166 (+)
LOC120548871 NA coding downstream 50510 2142172 ~ 2152961 (+)
LOC120548873 NA coding downstream 170531 2262193 ~ 2264878 (+)
LOC120548876 NA coding downstream 339644 2431306 ~ 2432865 (+)
LOC120549189 NA coding downstream 376292 2467954 ~ 2470455 (+)
LOC120548878 NA coding downstream 421849 2513511 ~ 2514641 (+)
G199523 NA non-coding upstream 9540 2045858 ~ 2046300 (+)
G199485 NA non-coding upstream 22303 1954438 ~ 2033537 (+)
G199495 NA non-coding upstream 48161 2004229 ~ 2007679 (+)
G199492 NA non-coding upstream 58138 1996515 ~ 1997702 (+)
G199482 NA non-coding upstream 96063 1948666 ~ 1959777 (+)
G199541 NA non-coding downstream 6556 2098218 ~ 2100434 (+)
G199549 NA non-coding downstream 14410 2106072 ~ 2106368 (+)
G199551 NA non-coding downstream 17833 2109495 ~ 2109822 (+)
G199553 NA non-coding downstream 30302 2121964 ~ 2122163 (+)
LOC120549790 NA non-coding downstream 47900 2139562 ~ 2141759 (+)
LOC120549526 NA other upstream 954436 1099584 ~ 1101404 (+)
G199306 NA other upstream 1063828 963109 ~ 992012 (+)
LOC120549207 NA other upstream 2004954 27895 ~ 50886 (+)
G199564 NA other downstream 67228 2158890 ~ 2159383 (+)
G199652 NA other downstream 456323 2547985 ~ 2548539 (+)
G199689 NA other downstream 600811 2692473 ~ 2693453 (+)
G199885 NA other downstream 1404418 3496080 ~ 3523889 (+)
LOC120549013 NA other downstream 2930996 5022658 ~ 5024934 (+)

Expression


Co-expression Network