G201242


Basic Information

Item Value
gene id G201242
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 9562678 ~ 9612629 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU272652
gtaaaaatgaatacaaaagcGGTTTTCTTAACATTTCATATATGAATCACTCGTGACTTTGAGGTCAAATGAGTCTTtagttggattttttttttttgtcaggaatgacttttttttttttttttttttttacaatctaGTTTTGCTGAATTAAGGCCTCTTGATTTTGGCATCAGAACAATCTGTCAGTCAAATGTTTGTATCTGAAGTTGAATTAGTGTAGAGTTATGAACTCTCCTGGTTTCACAGTTCAGtcagaaaaacataaaataaacccTTACAAATAAATACCAAAATGGCTCAACATGCAGATGTAATCCATTTGTCCTAAAATGCAGACACAACTAAGCACATTTCTAATGGTCAGTGTTTGACACTGCAGGCATAATGCAACAATAACAATGGCACATGAGGCTGCTTCATTCAAGGGGACTCCGTCACAATTAATTTTCCTTCTTGAGCGTCTTTTAAAGAGGAGAAATATGGGCAAACGGTGGGAAATACTTGatgaaaaatggaaaaacattTGGTGgaattccccttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttaaaaaaaaaagtttaagtgACAAGGAGTGCAATCCTGTGTTGTGAAAGCCACTCTGACATCTTTACTGCATTACAGTGAAACCTCTGAGGGTGGAAACACACCTGAAGGTTTCATCTTCTGGGATTTTGGGACAAATTTTGTTAAAGGAAAGGACAATTTTAGCTAATTTGCTATGCCGATAGTCAGGCAAGAGATTGATAACTCTTTTAGGTTTGTCCATTTAACGTGAAGCGTAAGTAAAGTTACCGCCAgttgttagcttagcataacgaTGGGAAACGGCTAGCCTCACTCATTCGAAAGTTAACAAAATCCACCCAccagctcactaattaacacgttaCACCACTttttgtttaatccgtacaaaaacTACGTTGGGGGGACTATTTTCTGAAGTCCTGTCGTCACCGTGCGGTTGCAATCATTACAATTGCTAACGATACGTacgttaaacatacagtattgaTTTAGCCTCTTTAAGGAAGTCACTTTTTCCGGCTAAGAAATAATTGGGAACATAATTCCCTGTAATTAGGGTTAGAGGTGCTGTGAGGCAGATTGTGTTAcctttagacagagccaggctagccgtttgcccctgtttccagtcattatgctaagctaactagcggatTACTTTGTATTTGCATACGGACATGAGAGTGGTGCCATACTTTACACGTCACACCCAAAATATCAAACTAGTCCTTTATGAGTCTTCTAGTGTGTGTCCACCCAAACTACTGCAGAGGATTTCATCACTAAATTACTGCATATTATAACTCCTTTTGTTCATTCCAACAAAAGACAattttacatataaaaaaaatgacaattcaAAGAAATGAGAAGGCCTGTTTGATTTAACCCCAAATCTCTGAAGTTCTTTCTTTTTGAAGGGATGGTTTACGTTCACATTTCAGAACACCAGATGTTACATTATTTAAACATCACATTAATTATCTTTTTCTTTGCAGATTCCATTTCCTTAAAAAAGGTACACTGATTTAACAATAAGGCATATTCTAAACACTTCCAATTTCGCAAGTCAAACCTTGACCCCTAACGGTATCTTCAGAAGCTAAATTTTGAAGCACATTTTCAATTTATCGCACAAAAAATGAAAGACATTTTGCAGCTTTAGAATGTTGACCTTAAAGGTAAAATCCATCTACAAATAATATTTTGCACAGGTTTcatgggggggggaggagagtCGTACAACCACTAGAAATGACAACTCTCTCGCGGATTTTCATATAAACAGTTCATCTTCACACAGACCAATAAGATTGTCACATTAACATAAGAtgctgcaaaaaataaataaaaaatcatattGCTCTACAATGGCTGCGTGAAAACAAATCTTCGGCTCAGTAACGCGGGCTTCaaaccaataaataaataaataaataaagacaagtTTAAATGAAAGTGTGAAGCGGATGATTcctctagttttttttttttttggtcaaagGCTGTTTGATGATGCAGACAGGCTGTACAGTGTCTGTCGTGGAAAACAACTGCAGTTTTGGCGTTCTTCCCTTTCTCAAACTGGACATTTGCGTGATCGTGTATGCCGTTTTGGTGACCCTCAAACGCGCTCTAAACTACACGGGCTTCGATGACAGAAACAAGCATCCCTCACATCCTGAAAAACTATCTTCCCGGCGATAAGCGAGCCGGGCAAAgatctccctcctcctcctcctcctcctcctcactgcACCACCACTGCTCCTAACAACCCTAACTCATTATTGCTCGCATGTTGATACGTAAAGTAAGGGAAACCATTCTCGTCTGACAACAAGGCTCCAAACTTAAAACTAAAACGCGACTCTTTCTTTCGGCTTTGAGGAGGACAGCCTCCAGTTTGGGAGAAGAAACGACgtggacgtttttttttttttttttATGTGGTAGTCTACATTTTACATCCAGAGGGGAATGAATGTAAAGcttagtaatttgaatgttaacCTACGTAAATCCTGTGGCTTAGGGCTCCCTTTAAAGCCATGGCTAGACTTAATGACCAGGAATCAAaactggaggtctctcagaatTGTGGATGTGGAAAATGTGGAATCTGgttgaaaaagagagagggggggttcAAAAGTGGGAAAAGATTGTGCATAAGGTATTGTGCTCATTAGGTTTCTATTATTAAAACAACAGCATGCCTGGAAGTCAGGCTGCACTGCCCCGGTAAAGATTTATTTAATGATATTTCTTTAGTTGTTCAGTGCCCAGGACAAGTGGGTGGTCACCTATTTTTGGTGTTTGTACAGTCGAAGTTATAAAAATCCCTTCTTGCCCTCAACCTTGTGAGACTTTGAGGTGCCTCCCTCCACTCTTGGTCGCAGGACATAATGTTCATGTAGCCTACTCCAATAAAGTTTAAATCCTGCAAATCCTCAGCAGATTTCTGAAACTGACAATCACTCTTGTTGAAGGCTTTTTGCATCTTGCATCCTGAACACTATAAAGAGGTTTTGTAGTTTATTAAACCGGCATCCTTTATTAAATGTGCTTATTGAATCTGAATCCTCTTGAAtgtctttttaaatatataggctatggatttaacttttttaaccaaacattataaacaacTTATTtaagaactaaaaaaaaaaagagaaaccttAACTTCAAGTAATAGTTTAACATATTATTTTCTTCCTTGTCGAGAGTTAGATAAAAAGAGTGACACCATTCTCATGTATGTACACTAAATCTGAAGTTGGCCTAATGGAGACCATGGATGATGTAGACAGGTAAATGGCTAGCCGTCGGTTAGCTTACTTTACCCTAACAGAAACGGGTAAACAGCTAGCAGTCAGCTTACTTTAGCCTAATTGAGACAGGTAAACAGCTAGCAGTCGGTTAGCTTACTTTAGCCTTACCAAAAATAAGTTAACAGCTTATAAGTTAGTTGCCTTTCTTTAACCTAGCTACGGAAACAGGTAAATGGCTAGCAGTAAGCTAACTTAATGGAGACAGGTAAATAGATAGCATTTCGCCAATTAttatgtctttctttttttttttaaagtgtaagATGACATGGATagcatttagcatttagctaagATATAGAGGGCAGTACAAAAGAGATCAGTACAGCAAAAAGTACAATGCACACAGCATTAACAATGACTCTCCAACAGCAAACTACAACATAATAGTAATAGTAGTGGTGGTATTAAgtattacattaataaaaaaaatatataaataaaggaggAGCATGGGCTGAATGAGTCATAGCTAGGTATTGGGTTAGAGTTTTGCGGTAAGAAGATGATCGGTCCTTTCCCAGGTTCAAAACTAAATTGAAATCCCCACCTATAACGAGCTCATTTGAGGAGCATTCAAGCATGAGAATCACATTTTGGAAGAATTGAGGGCAATCATAATTGGGGCCATAGGCATTAATCAATGTAATAGCCTTTAAGTATCAAGTATCTGccttctttgtctttctcaACGTTAAAAATGTACCTTTGCAGGTAGCAAAGGTACATTTTTACCAATCAGAGTGGCAACTCCCCTTGATTGATATGTATAGGATGCATAAAACGCCTGTCTTTGCCATTGTCGGGTTAGTTTAGCATGTTCACGATCGGTCAAATGTGTCTCCTGCAATAGAGCTATAtctattttatgatttttcagGAAGTTAAGTACCTTTTTACGTTTTgataatacattgatgccattaGTGTTCCATGTCAAATACCTAAGAGCTGCATTTGTCATTTCCCCTATCTGCCTATCCAGTAAGGCCATGTTACAATAAACCAGTTAACCCTGGCAACCTCTaaataagttattattttttttatattgaagGCCAATGTAAAAGTGGAGAGTTAGACAAGCCATGCCAGAGCATAGTAATGACAAAATGACTTATTTTCTATTTAGCCTATATAAATTACTATCGTAACCTTGACGCTTTTGACAATGCTCTTtgataacagaaaaaaagagacttgGAACCAAATTCAAGATGGCCTAAATGGatttataaactgtatttatatttccaTTAAAGTGTGAATATTTGTGTAGAAAAATATTGTGTGTTCAAGGTAAGTGTGGCTGGAAGAGAG

Function

GO: NA

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU272652 True 4757 lncRNA 0.37 2 9562678 9612629

Neighbor

gene id symbol gene type direction distance location
exd2 exd2 coding upstream 110 9553606 ~ 9562568 (+)
numb numb coding upstream 9828 9501661 ~ 9552850 (+)
galnt16 galnt16,LOC102792495 coding upstream 65140 9442548 ~ 9497538 (+)
vps39 vps39 coding upstream 131631 9393774 ~ 9431047 (+)
LOC120549640 tmem87a coding upstream 171212 9371102 ~ 9391466 (+)
paplna papln,LOC102790008 coding downstream 2931 9615560 ~ 9653399 (+)
LOC120549788 LOC104935424,LOC103365743,LOC103381674 coding downstream 401095 10013724 ~ 10024172 (+)
LOC120549541 NA coding downstream 417367 10029996 ~ 10034827 (+)
LOC120549542 NA coding downstream 417931 10030560 ~ 10031384 (+)
LOC120548903 NA coding downstream 427514 10040143 ~ 10040762 (+)
G201239 NA non-coding upstream 63895 9498496 ~ 9498783 (+)
G201173 NA non-coding upstream 218685 9336645 ~ 9343993 (+)
G201175 NA non-coding upstream 231845 9329485 ~ 9330833 (+)
G201134 NA non-coding upstream 288701 9268917 ~ 9273977 (+)
G201056 NA non-coding upstream 343023 9218738 ~ 9219655 (+)
G201309 NA non-coding downstream 219008 9831637 ~ 9856727 (+)
G201314 NA non-coding downstream 293868 9906497 ~ 9906866 (+)
G201396 NA non-coding downstream 481762 10094391 ~ 10094751 (+)
G201409 NA non-coding downstream 539272 10151901 ~ 10152759 (+)
G201480 NA non-coding downstream 660443 10273072 ~ 10295497 (+)
G201057 dcaf10,LOC102795877 other upstream 341376 9220641 ~ 9221302 (+)
LOC120550068 NA other upstream 2662334 6900139 ~ 6900344 (+)
LOC120549783 NA other upstream 2794016 6758637 ~ 6768662 (+)
vps29 eif5,vps29,LOC107595689 other upstream 2815276 6732248 ~ 6747402 (+)
G200492 NA other upstream 2880087 6677658 ~ 6682591 (+)
G201287 NA other downstream 96235 9708864 ~ 9817625 (+)
smoc1 smoc1 other downstream 323107 9935736 ~ 10007687 (+)
LOC120549492 NA other downstream 429396 10042025 ~ 10044094 (+)
LOC120549595 NA other downstream 436882 10049511 ~ 10050146 (+)
LOC120548905 NA other downstream 437619 10050248 ~ 10050943 (+)

Expression


Co-expression Network