LOC120549788 (LOC104935424,LOC103365743,LOC103381674)


Basic Information

Item Value
gene id LOC120549788
gene name LOC104935424,LOC103365743,LOC103381674
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 10013724 ~ 10024172 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039786924.1
GCACCAACATCTTGTGGGAGTGATACCCCAACTCACCCAAACAAATGGCGTCGCAAGAGAGCCATCTGACAGCCACACTCCTGACCTCCATCCTGGCCGCGGTGCTCGGCTCGCTGCAGATTGGCTACCACACCGGCAACGTCAACGCTCCAGCCAAGATCATCGAAGAGTTTTTCAACCACACCTGGAGAGCCAGGCACAACCAGTCGATGCCAGATCACAGCCTGACTCTCCTGTGGTCGCTCTCTGTCAGCATTAAAGACTTTGGAGCCTTGTTGGGCTCGCTGGGAGTCAAATACCTGGCAGATTCTTATGGAAGACGGAACTCCATCCTAATAGTGAACTGTCTCTCTGTCGTGGGAGCGTGTCTGATGTCCGCCTCCAAAGCCAGCAAGTCATTTGAGGTTCTCATCCTGGGACGATTGGTGTTCGGTCTCTTCTGCGGCCTAGTGATGAGTCTCAATCCGCTCTACATCCAGGAAGTGTCCCCCACAAACCTGAGGGGGGCCTTCGCCACCCTCAACCAGGTGTCCTTTGCCTCAGGCATCCTGATGGGAATGGTGGCTGGTCTGGAGACAGTGTTGGGTACAGAGCATTACTGGGCCATGATGTTGTCCCTGTCGCTCATTCCGGCCCTGGCGCAGTACCTGGTGCTGCCTTTCTGCCCCGAGAGCCCTCGCTACCTGCTCATTAACCGGGGAGAGGAGAGCAAAGCAGAGGCTGCCCTGCTGAGGCTGAGAGGCAGCTCAGACAAGGTGTTTGCTGAGCTGGAAGAGATGAAGGAAGAGGCCGCCCGCACTCAGAGCGGTGTCACCATCCACCAGTTCTTCAAGAAGCGCAGATACAAGCAGCCCATCGTTATCGTCCTCATCATCAACTTGGGCAGCCAGCTGTCGGGATTTAATGCGATCATTAATTACTCCACCAGAATGTTCCAGGCCAAGTTTGATCAGGCCAAATACCTGACTCTGGGCGTGGGGGCTGTCAATGTGATGTTCACTCTGGTGGCATTCTTCCTGATGGAAAAGGCAGGGAGGAGGAGATTGCTCCTGACTGGTTTCATCTCTATAGCAGTGTGCAACTTACTTATGACCATAGTGGATTCTGTCCTGCACCTGGTCCCAGAGCTGCGGAGCCTGCAGGTCCTGCTGGTTTTCTGCCTGATTTCAGCCTACGAGCTGGGCCCAGGCCCCATCTCATGGTTCATCGCTGCCGAGCTGTTCGACCAGCCTGGCAGACCCATCGCTATGGCCTTCACCAGCATGCTCAACTGGGGAGGGAAATTTGTTCTGGCACTCCTCTTCCCTCCTTTACTGAAACTCTGCGGTGAGTACATCTACCTCCTCTTCATGGCTGTGGCTCTGGCCGCCTTCTCCTTCACCTGGATTCGCCTCCCGGAGACAAAAGGCCGCACATTCGATGACATCGCAGAGGAGTTCAGAGGAGCGGAGGGCATTCCTTTGCACAATAGTATTGGATTCAACACTTTCACCTGACCCACCTTTCGACCATTACTGAATCTACAAGCTGGTCATGGTCATGCTGTTAAAAAGGTCCATTCACCCAGTttaccaacttttttttttaagcagatgTT

Function

NR:

description
PREDICTED: solute carrier family 2, facilitated glucose transporter member 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039786924.1 True 1597 mRNA 0.54 10 10013724 10024172

Neighbor

gene id symbol gene type direction distance location
paplna papln,LOC102790008 coding upstream 360325 9615560 ~ 9653399 (+)
exd2 exd2 coding upstream 451156 9553606 ~ 9562568 (+)
numb numb coding upstream 460874 9501661 ~ 9552850 (+)
galnt16 galnt16,LOC102792495 coding upstream 516186 9442548 ~ 9497538 (+)
vps39 vps39 coding upstream 582677 9393774 ~ 9431047 (+)
LOC120549541 NA coding downstream 5824 10029996 ~ 10034827 (+)
LOC120549542 NA coding downstream 6388 10030560 ~ 10031384 (+)
LOC120548903 NA coding downstream 15971 10040143 ~ 10040762 (+)
LOC120548904 NA coding downstream 17039 10041211 ~ 10041858 (+)
arg2 arg2 coding downstream 143205 10167377 ~ 10175985 (+)
G201314 NA non-coding upstream 106858 9906497 ~ 9906866 (+)
G201309 NA non-coding upstream 156997 9831637 ~ 9856727 (+)
G201242 NA non-coding upstream 401095 9562678 ~ 9612629 (+)
G201246 erh,LOC100699790,LOC101174968,LOC105904210,LOC101161113 non-coding upstream 422940 9586960 ~ 9590784 (+)
G201239 NA non-coding upstream 514941 9498496 ~ 9498783 (+)
G201396 NA non-coding downstream 70219 10094391 ~ 10094751 (+)
G201409 NA non-coding downstream 127729 10151901 ~ 10152759 (+)
G201480 NA non-coding downstream 248900 10273072 ~ 10295497 (+)
G201505 NA non-coding downstream 306658 10330830 ~ 10368130 (+)
G201478 lgmn,LOC102784085 non-coding downstream 354709 10378881 ~ 10385415 (+)
smoc1 smoc1 other upstream 6037 9935736 ~ 10007687 (+)
G201287 NA other upstream 196099 9708864 ~ 9817625 (+)
psen1 psen1,LOC100697238 other upstream 409099 9591170 ~ 9604625 (+)
G201057 dcaf10,LOC102795877 other upstream 792422 9220641 ~ 9221302 (+)
LOC120550068 NA other upstream 3113380 6900139 ~ 6900344 (+)
LOC120549492 NA other downstream 17853 10042025 ~ 10044094 (+)
LOC120549595 NA other downstream 25339 10049511 ~ 10050146 (+)
LOC120548905 NA other downstream 26076 10050248 ~ 10050943 (+)
LOC120548906 NA other downstream 55553 10079725 ~ 10080656 (+)
LOC120549808 NA other downstream 56553 10080725 ~ 10082943 (+)

Expression


Co-expression Network