Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120548904 |
| gene name | NA |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053131.1 |
| NCBI id | CM020928.1 |
| chromosome length | 36057207 |
| location | 10041211 ~ 10041858 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| unassigned_transcript_1142 | True | 498 | V_gene_segment | 0.45 | 2 | 10041211 | 10041858 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120548903 | NA | coding | upstream | 449 | 10040143 ~ 10040762 (+) |
| LOC120549541 | NA | coding | upstream | 6384 | 10029996 ~ 10034827 (+) |
| LOC120549542 | NA | coding | upstream | 9827 | 10030560 ~ 10031384 (+) |
| LOC120549788 | LOC104935424,LOC103365743,LOC103381674 | coding | upstream | 17039 | 10013724 ~ 10024172 (+) |
| paplna | papln,LOC102790008 | coding | upstream | 387812 | 9615560 ~ 9653399 (+) |
| arg2 | arg2 | coding | downstream | 125519 | 10167377 ~ 10175985 (+) |
| rdh12 | rdh12,LOC102788257,LOC106922439 | coding | downstream | 140251 | 10182109 ~ 10193114 (+) |
| si:ch211-10a23.2 | LOC106954063,LOC103365732 | coding | downstream | 193160 | 10235018 ~ 10241158 (+) |
| oip5 | NA | coding | downstream | 314069 | 10355927 ~ 10359845 (+) |
| LOC120549517 | ttc9 | coding | downstream | 409792 | 10451650 ~ 10456590 (+) |
| G201314 | NA | non-coding | upstream | 134345 | 9906497 ~ 9906866 (+) |
| G201309 | NA | non-coding | upstream | 184484 | 9831637 ~ 9856727 (+) |
| G201242 | NA | non-coding | upstream | 428582 | 9562678 ~ 9612629 (+) |
| G201246 | erh,LOC100699790,LOC101174968,LOC105904210,LOC101161113 | non-coding | upstream | 450427 | 9586960 ~ 9590784 (+) |
| G201239 | NA | non-coding | upstream | 542428 | 9498496 ~ 9498783 (+) |
| G201396 | NA | non-coding | downstream | 52533 | 10094391 ~ 10094751 (+) |
| G201409 | NA | non-coding | downstream | 110043 | 10151901 ~ 10152759 (+) |
| G201480 | NA | non-coding | downstream | 231214 | 10273072 ~ 10295497 (+) |
| G201505 | NA | non-coding | downstream | 288972 | 10330830 ~ 10368130 (+) |
| G201478 | lgmn,LOC102784085 | non-coding | downstream | 337023 | 10378881 ~ 10385415 (+) |
| smoc1 | smoc1 | other | upstream | 33524 | 9935736 ~ 10007687 (+) |
| G201287 | NA | other | upstream | 223586 | 9708864 ~ 9817625 (+) |
| psen1 | psen1,LOC100697238 | other | upstream | 436586 | 9591170 ~ 9604625 (+) |
| G201057 | dcaf10,LOC102795877 | other | upstream | 819909 | 9220641 ~ 9221302 (+) |
| LOC120550068 | NA | other | upstream | 3140867 | 6900139 ~ 6900344 (+) |
| LOC120549492 | NA | other | downstream | 167 | 10042025 ~ 10044094 (+) |
| LOC120549595 | NA | other | downstream | 7653 | 10049511 ~ 10050146 (+) |
| LOC120548905 | NA | other | downstream | 8390 | 10050248 ~ 10050943 (+) |
| LOC120548906 | NA | other | downstream | 37867 | 10079725 ~ 10080656 (+) |
| LOC120549808 | NA | other | downstream | 38867 | 10080725 ~ 10082943 (+) |
