G201505


Basic Information

Item Value
gene id G201505
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 10330830 ~ 10368130 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU273019
tttaTGAAACAGTGcctctttatttttttccgCACTCACTCCAAAATGCATATTTACATGGCATGCCACATCGATACATAAACTGACTATGGACACAATCAATAACACATAGAATCTGCTCTGGGAGGTAAGGGCAGGGGAGTTACCCCTCGAACAATCAACAAAGAGATAACAGAAATGAAGCAACACTTTTATAACCAGGCCAGTCATAGAAAAGGGTTCCTCTTAAAACGGGTCGTTTCAAAGACTTAAAAAGTGATACGTGTCCAGTTAACACAAACTGAACTTTTTCACATTTGCCATGTAGGGCCGGCGTCACGGTCGAGTCAGAGATGGTGATCTACAAAAAAATCACGACGCTGTTAAAAATTCAGGATGGACTGAGGGCAGATGATCACATGtaggaagggaggggggggattTACAACAGTAATTATTTATTGGTGAGGACAAGCTGGTCAGCTCCATTAGAAATCCAATAATTTCAAAATGCCTCAACAATCTAAGTCTTCTAAGATAGTGTCCTTGTTCAATAGTAATAGTCCACAAGCGCTGCAtcctttcagaaaaaaaaaagaaaaaaaaaagtggatttcCAGAAGATCCAAAagagtggggggaaaaaaGTTAAAAAAACAGAACCTTCACCACGGATTGACACAAAGCAAGCATGGCACTTAATTTATTCAAATCAAATTCATGAATCACTTTGATAATACCTAGAACCGACATCACATAACATGTGCATCATATCTGATTGATAATCACATAATGATTAATAGAATGGCCAAGTTGTAGTTCCTGCACTCGGCTGCTGGAGGGTGTTTTTGTAATGAttaacacacattaacacattcAAGATTAGAAGGGTCAGGCATTTGCACAATTCATGTACACTAGCACtacagaaaatatatatttttaaagtagTTGATTCTCTTTACCATCTAGAACTAGTCAATGGGGGAATACATTGTCAGACAAATGTTGAGCAGTGCAAACATCAACAAACGTGTTTCTTAGCCACAGGGAGACTGATCAGATAAATATAGCGCATTATCATGGGTTTACCTGTTCTAAGTCTACAAACTAACTGGTCCATTGCCCAATTTTCACCACAGAGCCTGACACTGTTAGCCAGGGCTTTATTAAGACTCAAGGGgtggggtgtgtggggggggggggaccagTTTTTGAAAGCAGGTCACAGTGGCAGCTAAATCCTAGTGAAGCCATTTTGCAAACTTACTAGAACAGGTTCCCAGgaagatacacacacaagcccAAAAAGATAGTAGCATTTTGTGTGAAATCGTCATTCTTAACGCCACAGTTTTTAGTTGTAACTAATCAAGCAGttgtttaaatattaaaatcacaTTATACACGTTGAGTCAGCAGTGGCTCCAACAGGCCCCAGGTGGTTACTGGCTTTGAAAGAGGGTCAAACTCGCTGTGGTTGAAGTCCCAACAATTGAAAAAGATAATTACAATGTATTGGCAGTAGCTAGGTTAACccatatgaaaagaaaaaaaaaagaaaaaatacacaaacatggCCATAGGTTCCGATTAACTGTTGAGATGATAACTTACAAAGGGGGGAACCAAAGCCATGGCACTTTAGTGAGTACAACACAAACGTCTGTGGAGCAGGTCCTGCGTTGCTTTAAGGGACACACTTAGAGCTGGCTGGTCTGAACTGCTCTGACACAAGTCAGAGATAAGGAGTGATAAGATCCTGTTAGCATTAAAAACACTGTCTGTTTGGAAGTGGAATCACACATCTTACAAGTTTCACTTTGAACCATTACATATTTATACGGACAAAAGACACACGCGCCAACTATCCATTGAACAGCATGAGTAAACTTAGAATAAAACTTACTCACTGCAATAGCAACCAGCTTTAATCATACCTTGCTATAAAATCATTTTTCATGTGAAAAGTTCAACAGCAGTAGTACTAACTGTGACCCTCTAAAAGTTTTCTAATAAATAATGTTCCATTACGCGGGGTTGTCATAGTGACATTGCAGAAAACAGCCCAAGGCACCGAACTTTTCCCTTTGTTTACAGAGCAGTGCAGAGGCAGAAACTCAAGATCTATGACATTCTCTACCTAGTGCTTGGTCTGACAGCGGGCACTCGTAGTGTGGGCCAGGGCCGCCTGCTGAGAAGATGAGATGACGGTGTGTTCTGATATCAACTGACATGTTGAAGCTcaacccaaaaaacaaaaacaaaaatttagTGTAGGAACCGGATGCTCATTTTCTGTTCTACGTCCACCTTCTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU273019 True 2300 lncRNA 0.40 2 10330830 10368130

Neighbor

gene id symbol gene type direction distance location
si:ch211-10a23.2 LOC106954063,LOC103365732 coding upstream 89672 10235018 ~ 10241158 (+)
rdh12 rdh12,LOC102788257,LOC106922439 coding upstream 137716 10182109 ~ 10193114 (+)
arg2 arg2 coding upstream 154845 10167377 ~ 10175985 (+)
LOC120548904 NA coding upstream 288972 10041211 ~ 10041858 (+)
LOC120548903 NA coding upstream 290068 10040143 ~ 10040762 (+)
LOC120549517 ttc9 coding downstream 83520 10451650 ~ 10456590 (+)
gmfb gmfb,LOC102779377,LOC106530653 coding downstream 541781 10909911 ~ 10919714 (+)
cnih1 cnih1,LOC107736564,LOC107683416 coding downstream 552138 10920268 ~ 10927808 (+)
LOC120548749 LOC100706276,LOC102792403,LOC101466565 coding downstream 566132 10934262 ~ 10944673 (+)
dmac2l atp5s coding downstream 628667 10996797 ~ 11000545 (+)
G201480 NA non-coding upstream 35333 10273072 ~ 10295497 (+)
G201409 NA non-coding upstream 178071 10151901 ~ 10152759 (+)
G201396 NA non-coding upstream 236079 10094391 ~ 10094751 (+)
G201314 NA non-coding upstream 423964 9906497 ~ 9906866 (+)
G201309 NA non-coding upstream 474103 9831637 ~ 9856727 (+)
G201478 lgmn,LOC102784085 non-coding downstream 10751 10378881 ~ 10385415 (+)
G201523 NA non-coding downstream 17455 10385585 ~ 10388109 (+)
G201558 NA non-coding downstream 57035 10425165 ~ 10425815 (+)
G201589 slc8a3,LOC102781970 non-coding downstream 120775 10488905 ~ 10495727 (+)
G201591 slc8a3 non-coding downstream 129523 10497653 ~ 10497925 (+)
G201399 NA other upstream 213224 10112020 ~ 10117606 (+)
LOC120549807 NA other upstream 238240 10091682 ~ 10092590 (+)
LOC120549808 NA other upstream 247887 10080725 ~ 10082943 (+)
LOC120548906 NA other upstream 250174 10079725 ~ 10080656 (+)
LOC120548905 NA other upstream 279887 10050248 ~ 10050943 (+)
LOC120549737 gbg2,gng2,LOC108239039,LOC106603227 other downstream 922969 11291099 ~ 11312327 (+)
smc6 LOC103364213,LOC106962855,LOC103144702,LOC100705580 other downstream 1097281 11465411 ~ 11486581 (+)
si:ch73-242m19.1 NA other downstream 1156275 11524405 ~ 11562012 (+)
tulp4b LOC102297897,LOC102791722,LOC102199752,LOC101471710 other downstream 1520433 11888563 ~ 11904206 (+)
slc18b1 slc18b1 other downstream 1537711 11905841 ~ 11913857 (+)

Expression


Co-expression Network