LOC120549807


Basic Information

Item Value
gene id LOC120549807
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 10091682 ~ 10092590 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1147
acacaatgatCATCACATTCCTTTGTATTACTTGTACCTCTATTCTGGTTTCAGGTTCCTCTCTCAGTGACAACGTCCACCAGACTCCAGATGATGTGTTCAACAAACCTGATGAAACGTTAGAAATCAACTGTACACACAGCATTCAGAACTACAACCAAATCCTCTGGTACAAGCAATCGGACAGACAACTGCAGTTCCTGGGATACATGTTTACAACCAGTGGAAACCCAGAGGCTGGCCTGGGTGTGAAGATAGAAGGGAGTGCAAATAAAGACCAAAACTGCACATTAACAATTGAAAAACTCAGCCTGAGCAGCAGTGCAGTGTACTTCTGTGCTGCTTGGTTACACAGTGCTACATATCACTGCTCCTCAGTACAAAAACCTCCTCATCACACTCATTCTTTATCTCTGTATTAAAGCTCACAGTGCCTCCGTGCACCTGGAATAAGCCAGTCTAACcaatgtctgtctctcttctgatTAAGATCCAAAATTAGAATGGGAGGTCCTTTCTGTAGAGCAATGCCTTTAACCTCCCACCTCCCATTATAAAAGCAGCCTCAGACATTCATCAGGTCTGCTGTGGCGGCGTCTCATGTTAACAGGATCACTATTATGACTCAAGTTCTCATTACATTTGTAGTCTCGTCTCTGTGGCTTCAAGGTACAAGGCTAAAaattagaggtcgaccgatagtggattttaccgataagtacaagttcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1147 True 730 V_gene_segment 0.43 2 10091682 10092590

Neighbor

gene id symbol gene type direction distance location
LOC120548904 NA coding upstream 49824 10041211 ~ 10041858 (+)
LOC120548903 NA coding upstream 50920 10040143 ~ 10040762 (+)
LOC120549541 NA coding upstream 56855 10029996 ~ 10034827 (+)
LOC120549542 NA coding upstream 60298 10030560 ~ 10031384 (+)
LOC120549788 LOC104935424,LOC103365743,LOC103381674 coding upstream 67510 10013724 ~ 10024172 (+)
arg2 arg2 coding downstream 74787 10167377 ~ 10175985 (+)
rdh12 rdh12,LOC102788257,LOC106922439 coding downstream 89519 10182109 ~ 10193114 (+)
si:ch211-10a23.2 LOC106954063,LOC103365732 coding downstream 142428 10235018 ~ 10241158 (+)
oip5 NA coding downstream 263337 10355927 ~ 10359845 (+)
LOC120549517 ttc9 coding downstream 359060 10451650 ~ 10456590 (+)
G201314 NA non-coding upstream 184816 9906497 ~ 9906866 (+)
G201309 NA non-coding upstream 234955 9831637 ~ 9856727 (+)
G201242 NA non-coding upstream 479053 9562678 ~ 9612629 (+)
G201246 erh,LOC100699790,LOC101174968,LOC105904210,LOC101161113 non-coding upstream 500898 9586960 ~ 9590784 (+)
G201239 NA non-coding upstream 592899 9498496 ~ 9498783 (+)
G201396 NA non-coding downstream 1801 10094391 ~ 10094751 (+)
G201409 NA non-coding downstream 59311 10151901 ~ 10152759 (+)
G201480 NA non-coding downstream 180482 10273072 ~ 10295497 (+)
G201505 NA non-coding downstream 238240 10330830 ~ 10368130 (+)
G201478 lgmn,LOC102784085 non-coding downstream 286291 10378881 ~ 10385415 (+)
LOC120549808 NA other upstream 8739 10080725 ~ 10082943 (+)
LOC120548906 NA other upstream 11026 10079725 ~ 10080656 (+)
LOC120548905 NA other upstream 40739 10050248 ~ 10050943 (+)
LOC120549595 NA other upstream 41536 10049511 ~ 10050146 (+)
LOC120549492 NA other upstream 47588 10042025 ~ 10044094 (+)
G201399 NA other downstream 19430 10112020 ~ 10117606 (+)
ndufaf1 ndufaf1,LOC102785420 other downstream 252429 10345019 ~ 10351126 (+)
LOC120549737 gbg2,gng2,LOC108239039,LOC106603227 other downstream 1198509 11291099 ~ 11312327 (+)
smc6 LOC103364213,LOC106962855,LOC103144702,LOC100705580 other downstream 1372821 11465411 ~ 11486581 (+)
si:ch73-242m19.1 NA other downstream 1431815 11524405 ~ 11562012 (+)

Expression


Co-expression Network