G36175


Basic Information

Item Value
gene id G36175
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 6055244 ~ 6056226 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU48492
GTCTCTGTGCACGGCTAAATTGGGGCAGAGAACTGTCAATGCTGTGAGCCGAGTCGAAGAACGCTACCGGCTCTACACCCACTGGTGGATCTTGCCTCGTTGTGCAGGCGATGAGAAGCGGGCTGGGTGTGGGTGGTTGCTGAAAAGAGCTCTAGGTCTGCTGGGTCGAAGCCTTTGGCCTTagtaagcccccccccccccttcttcaCTCTGCTGGACTACCACAGTACATGTAGCTCCTCTAACAAAGGCCCCAACTCACCAAGTGAGCTGCTTCCAGAGCAACTAAAACCAGGTTAGGTGAGGTTAACAAGTCCCAAAAAACTAAATCTGTCCTACTAGGATCGGAGGGTCAGGATTTGATCCGTGTTGAGTTAAAGCTTTGCAGATTCACACGTAGGGATGATAATCATGTGCCGTAAGCAATGTGTGAAGTCCAAGGGATATCCGTTTATGAGATTTTTCTGCTCTTAAGCTGTGGTTAATATGTAATTATGTACTTTATTGCATACAGATATGGAATCAGTGTTCAAAGGGAGGAATAGCAATGTGAATAGAACTAAAAAATGGGACCCCATCATTTTACATGCCTTATCTGCAACCACGTTCACTTGATGGAGTACTCCAACAGAAAGGATTCATTGTTAAATTATTGACAAATGGCCATTTGCTGAGTATATGAATTATTGCTTGTATATAGAATTTTAAAAAGGTGCAAAAGCAAACACTATGAATGATGGCATTGGAGCTGAAGTcctttgtttcctgtttcctttcCGCGCAAGCAGTTCTGTTCTTGTGTGCGACCAGTAACCTTAATTTACTGTGTAAAGATGGTTACATTTTTTAGCTTTGTTTGTCAGAGACCCAAATATAGAAGGCTTGTTTACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48492 True 891 lncRNA 0.44 2 6055244 6056226

Neighbor

gene id symbol gene type direction distance location
shq1 shq1 coding upstream 41290 5957271 ~ 6013954 (+)
pdzrn3b pdzrn3 coding upstream 150081 5793732 ~ 5905163 (+)
cntn3b cntn3,LOC100696343,LOC102785363 coding upstream 390191 5610010 ~ 5665053 (+)
LOC120556975 LOC103365933,LOC100695288,LOC105934533 coding upstream 1011767 4956351 ~ 5043477 (+)
rpn2 rpn2,LOC102784465 coding upstream 1151554 4893449 ~ 4903690 (+)
LOC120557997 eif4e3,LOC103355441 coding downstream 62406 6118632 ~ 6132639 (+)
eevs LOC104922196,LOC103355445,LOC104966975,LOC105934428 coding downstream 358740 6414966 ~ 6426594 (+)
LOC120556937 LOC103355436 coding downstream 410590 6466816 ~ 6521161 (+)
trnt1 trnt1 coding downstream 473225 6529451 ~ 6537424 (+)
si:dkey-178o16.4 LOC103355435,LOC104921970,LOC104952562 coding downstream 481315 6537541 ~ 6541431 (+)
G36170 NA non-coding upstream 34121 6020853 ~ 6021123 (+)
G36145 NA non-coding upstream 360298 5694393 ~ 5694946 (+)
G36114 NA non-coding upstream 614635 5438157 ~ 5440609 (+)
G36106 NA non-coding upstream 776562 5276453 ~ 5278682 (+)
G36105 NA non-coding upstream 820653 5234383 ~ 5234591 (+)
G36201 gpr27,LOC103355443,LOC102784210 non-coding downstream 55451 6111677 ~ 6114313 (+)
G36231 mitfa,mitf-a,LOC100534525 non-coding downstream 373281 6429507 ~ 6433109 (+)
G36288 NA non-coding downstream 487241 6543467 ~ 6544074 (+)
G36299 NA non-coding downstream 517920 6574146 ~ 6574347 (+)
LOC120556885 NA non-coding downstream 522754 6578980 ~ 6581303 (+)
rybpb rybp other upstream 28 6035072 ~ 6055216 (+)
G36156 LOC103374102 other upstream 130844 5920924 ~ 5924400 (+)
cdk5rap1 cdk5rap1 other upstream 1121080 4911699 ~ 4934164 (+)
G35921 NA other upstream 1469769 4487535 ~ 4585475 (+)
LOC120557928 NA other upstream 1522382 4529833 ~ 4532862 (+)
prok2 prok2,LOC103355444 other downstream 48387 6104613 ~ 6107152 (+)
foxp1b foxp1 other downstream 83237 6139463 ~ 6306143 (+)
setmar LOC100698471 other downstream 579054 6635280 ~ 6638523 (+)
si:dkey-245f22.3 NA other downstream 1126973 7183199 ~ 7187214 (+)
G36458 LOC100304472,LOC107385856 other downstream 1153770 7209996 ~ 7272368 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location