si:dkey-178o16.4 (LOC103355435,LOC104921970,LOC104952562)


Basic Information

Item Value
gene id si:dkey-178o16.4
gene name LOC103355435,LOC104921970,LOC104952562
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 6537541 ~ 6541431 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796839.1
GGTTGCTCCTCCCTCCTGCAGATATGAGCAGATATAAAGCCCTCTGCTTTCCTTTCTTAACACCACAGTTTCTGCCTGGACACTCTCAACACTTGTTGCTTACTGGACATTCACCCACTACACTCgcactatgattttttttcttctaggaATAACCTTTTGATGAAATTGTTAAAAGTCGAAGTCCATGCTTCCTGCTTACAtttgttgttgtagtttttaaatgttattattgCTGTATTTCGGGTGAAAGCATGGCTTGGTTCATTGTAAATATCAGTAACATCACTTTGGAGAATGCACTATCTGGGGATGAGCCGCGAGATGAGCGCTTGGCTCAAGTGGAAATAGCTCTCCTGTccatcatcttcatcactgCAGGGATGTTAAACTTCGGGGTCTTGTTGCTGCTGTGGAAGCGGAGGAAGCAGCTCTCCAGGATGCGCGTCTTCGTCTTCCACCTGTGCGTCGCCGATCTGGTGGTCACATTCTTCCAAGTTTGTCCCCAACTCATGTGGGACATCACTGACCGATTCGTCGGGCCAGATATATTGTGTCGCGTAGTGAAGTACCTGCAGGTGGTCGGGATGTTTGCCTCCACTTATATGATTGTAGTGATGACGATGGACCGATATCAAGCCATCTGCAACCCCATGGTGACTTTCCAAAGGCGCAGGGCGCGCTGGAACGGCGCGGTGTGCGCCGCTTGGTGCGTCTCTTTCATCGGCAGCCTCCCACAGATCTTCATTTTCTCTCGGGTCGAGGTCGCTCCCGGTGTGTACGACTGCTGGGCTCTGTTCATCAAGCCGTGGGGACCGAGAGCCTACGTGACCTGGACGACTCTGGTGATATTCGTCCTGCCCATTCTCGTGGTGATCGTGTGCCAGGTGCGCATCTGCCGCACCGTGCACATTAACTTTCACATGAAGACGCACCACGTCGCAGAGTCGGTCAGTAAGACGCTGTCCTCCAGGGCCAGCAGCGTGACAGGGGTGTCAAAGGCGAGGGCGAAGACTGTGAAGATGACCGTGGTCATCGTGCTCGTCTACATCATCTGCTGGACGCCTTTCTTCATTGTGCAGCTCTGGTCTGTCTGGGACATTGAGGCCCCCACTCAGACTGCAACCTTCACCATCTTGATGCTGCTAGCCAGTCTGAACAGCTGTGCGAACCCTTGCATCTACCTGCTGTTCAGCGAGAAGCTGCCCAAGACGCTCGTGGCCCTAATGTGTGTGGGTCAGTCCGATCTGAAGGAGTCCATCCATGAGGAGGCCACCATGGTCAGCTCCCTGCACATCAGCCTCAAGAGTCTGCCACACTGCAGATAAAGCGCTGACACCTCTGAAGCTCATCTTACCCCAGGCCAGACAATATTGGCATCCTCTAATAAGTGTGAGGCCAAACATCACAGAAGAACTACAAGTCCCTGTAGTAATTATAGTGAAAAATTAATAATCTGTGAAATGCTTTCATGTAGTTCAACTCACACACCATAAGTCTTTACAGGGATATAACAGTGAAACATCGAGTATGATTGCGTGCCATAAAGTCACTATTACATAACACATACTTAacggtcccatggcatgaaaatttcactttgaggttttttaacattaatatgca

Function

NR:

description
PREDICTED: oxytocin receptor-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005000 vasopressin receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796839.1 True 1626 mRNA 0.50 2 6537541 6541431

Neighbor

gene id symbol gene type direction distance location
trnt1 trnt1 coding upstream 117 6529451 ~ 6537424 (+)
LOC120556937 LOC103355436 coding upstream 16380 6466816 ~ 6521161 (+)
eevs LOC104922196,LOC103355445,LOC104966975,LOC105934428 coding upstream 110947 6414966 ~ 6426594 (+)
LOC120557997 eif4e3,LOC103355441 coding upstream 404902 6118632 ~ 6132639 (+)
shq1 shq1 coding upstream 523587 5957271 ~ 6013954 (+)
lrrn1 lrrn1 coding downstream 63939 6605370 ~ 6619215 (+)
itpr1b LOC102304252,LOC102203222,LOC100692694,LOC103355429 coding downstream 106884 6648315 ~ 6753630 (+)
bhlhe40 bhlhe40,LOC104959416 coding downstream 215513 6756944 ~ 6760482 (+)
LOC120556653 naaa coding downstream 225581 6767012 ~ 6770275 (+)
arl8bb arl8b,arl8a,LOC107095653,LOC105934196,LOC106565753,LOC103355426 coding downstream 234295 6775726 ~ 6786267 (+)
G36231 mitfa,mitf-a,LOC100534525 non-coding upstream 104432 6429507 ~ 6433109 (+)
G36201 gpr27,LOC103355443,LOC102784210 non-coding upstream 423228 6111677 ~ 6114313 (+)
G36175 NA non-coding upstream 481315 6055244 ~ 6056226 (+)
G36170 NA non-coding upstream 516418 6020853 ~ 6021123 (+)
G36145 NA non-coding upstream 842595 5694393 ~ 5694946 (+)
G36288 NA non-coding downstream 2036 6543467 ~ 6544074 (+)
G36299 NA non-coding downstream 32715 6574146 ~ 6574347 (+)
LOC120556885 NA non-coding downstream 37549 6578980 ~ 6581303 (+)
G36353 NA non-coding downstream 231305 6772736 ~ 6773170 (+)
G36368 NA non-coding downstream 406648 6948079 ~ 6951049 (+)
foxp1b foxp1 other upstream 231398 6139463 ~ 6306143 (+)
prok2 prok2,LOC103355444 other upstream 430389 6104613 ~ 6107152 (+)
rybpb rybp other upstream 482325 6035072 ~ 6055216 (+)
G36156 LOC103374102 other upstream 613141 5920924 ~ 5924400 (+)
cdk5rap1 cdk5rap1 other upstream 1603377 4911699 ~ 4934164 (+)
setmar LOC100698471 other downstream 93849 6635280 ~ 6638523 (+)
si:dkey-245f22.3 NA other downstream 641768 7183199 ~ 7187214 (+)
G36458 LOC100304472,LOC107385856 other downstream 668565 7209996 ~ 7272368 (+)
hcfc1a hcfc1,LOC102799381,LOC102206223 other downstream 747476 7288907 ~ 7306343 (+)
G36744 NA other downstream 1686331 8227762 ~ 8228720 (+)

Expression


Co-expression Network