G36649 (LOC104950789,LOC103358841)


Basic Information

Item Value
gene id G36649
gene name LOC104950789,LOC103358841
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 7699642 ~ 7752637 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU49149
gggggggggagggggGTACATGAACACTATTTGACATTTTAGCCACAGATTTTAGACAATTGTTTTAGGCTGTCAAACTGATGAGCAATACTTAAAAATCTCCAAAAGTATCCACACCAAAACAAGTACATTACAATTGCATATTTATGATTTAAACATATTTACCCAGTTCAAAATATTGCAACTTTGTTTATGAAAGTCAAACCAAACTGGATAAAAGAATAAAGGTTTTGAAACTGAACtgtgaacacaaacaaacatttgcataaataactgctgtaaaaaaaaaaaaaaaaagtaaacaaattGTGGATGGTGCTTTACCAGCTCCAACTAATCTCAGTGCAACATTTTAGGGAACACCATTTTGATGTCTGTGAAGTTTCATTGGCATTACAAAGTTGCAGTTTGATTGACAACTAACCTCACACCACTCACCTCCTGTTCCTGACTATGACGATAAGTATGTACTACATAATGTGTAGTATAGTAACCATTAGTATGTAGAATGGATTTGGAGCACAGTGACAAATTATGCTTTGGCAGCTTAATTTGCCTGGTCTTTGGCTTCATCTTCCTTATCCAGACTCAAATACTCACAAGCCTCTTTATTGCCATTTTGTGGCTTTGACGCCGACTGCCGTGACCACATCATCTGAATTTTCTTCGGGCACCACACAAACTCATCTTTACGGTCATAGTTCAAATAGGCAAACTTGAGGAGACTCCTGCGTTGTTTCTTATCAAGGACGGCAAACACAAAGTAGTTTAGAACGCTGTCCTTGACATTTGGGAGTTCTTTGCGGACGAGAGTCTCCTCCAGGAAGAAGCGAACCAGGGGGGCTTGGTAGTGAGGATACCCCAGGGTTCCCTGGCACTTCAGGATGCGGGTGATGCGCAGGTTGTTATGAGTGTGACTGTCAAATACAAACagtaaaaaggcaaaaaaataaaaataaaacagacagatggtttttattacttttagtGAACAATACGTTATTAAAATTCAGAGATCACCTGTTGAGGTTATCAAATCTGTCTTTCCAGTTTGATGCTCTCTCGACTTCTCCTGTGTTTTCATCACACAACCTGATACCATAGAAGTCCAACATGAGCTTGTACGACTCCAATAGATTGGCCTTCGCGGTGCTGTTTTGGCAAAACT

Function

NR:

description
PREDICTED: opioid growth factor receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU49149 True 1168 lncRNA 0.39 2 7699642 7752637

Neighbor

gene id symbol gene type direction distance location
myh7ba LOC103358826,LOC104966023,LOC101480568,LOC102289245 coding upstream 250624 7434210 ~ 7449018 (+)
snai1a LOC104939346,LOC103358824,LOC108244374,LOC107385873 coding upstream 283362 7412789 ~ 7416280 (+)
si:ch211-232b12.5 LOC104939380,LOC103365892,LOC100697406,LOC102796719 coding upstream 321992 7361940 ~ 7377650 (+)
mafbb mafb,LOC104945735 coding upstream 362330 7335466 ~ 7337312 (+)
gata1a LOC100696076,LOC102798593,LOC101485806,LOC102310803 coding upstream 382560 7312734 ~ 7317082 (+)
LOC120557341 LOC106565946 coding downstream 10251 7762888 ~ 7769742 (+)
cdh4 LOC102194679,LOC102298797,LOC100702438 coding downstream 133115 7885752 ~ 8116031 (+)
LOC120557574 LOC104939084,LOC103365882 coding downstream 387597 8140234 ~ 8142947 (+)
LOC120556871 NA coding downstream 418045 8170682 ~ 8177048 (+)
rae1 rae1 coding downstream 439066 8191703 ~ 8200687 (+)
G36638 NA non-coding upstream 35768 7662944 ~ 7663874 (+)
G36616 LOC103386327,LOC105417874 non-coding upstream 152607 7543986 ~ 7547035 (+)
G36609 NA non-coding upstream 167439 7531717 ~ 7532203 (+)
G36604 NA non-coding upstream 173679 7521180 ~ 7525963 (+)
G36568 ndrg3,LOC105922538 non-coding upstream 181376 7487896 ~ 7518266 (+)
G36727 NA non-coding downstream 391904 8144541 ~ 8146263 (+)
G36728 NA non-coding downstream 395290 8147927 ~ 8148229 (+)
G36745 NA non-coding downstream 471621 8224258 ~ 8224772 (+)
G36754 NA non-coding downstream 486826 8239463 ~ 8244446 (+)
G36820 NA non-coding downstream 652607 8405244 ~ 8407693 (+)
hcfc1a hcfc1,LOC102799381,LOC102206223 other upstream 393299 7288907 ~ 7306343 (+)
G36458 LOC100304472,LOC107385856 other upstream 427274 7209996 ~ 7272368 (+)
si:dkey-245f22.3 NA other upstream 512428 7183199 ~ 7187214 (+)
setmar LOC100698471 other upstream 1061119 6635280 ~ 6638523 (+)
foxp1b foxp1 other upstream 1393499 6139463 ~ 6306143 (+)
G36744 NA other downstream 475125 8227762 ~ 8228720 (+)
prickle2b prickle2 other downstream 2007596 9760233 ~ 9856656 (+)
G37197 NA other downstream 2552550 10305187 ~ 10309996 (+)
glrx glrx other downstream 2635271 10387908 ~ 10396187 (+)
G37397 LOC102299939,LOC103353648,LOC103366902,LOC102208776,LOC100700987,LOC104921056 other downstream 3244593 10997230 ~ 11012909 (+)

Expression


Co-expression Network