G36727


Basic Information

Item Value
gene id G36727
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 8144541 ~ 8146263 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU49242
attatccaggtccctaacgccccccatcaaatattatgtaggctaattgccctggatattaatgattacgccctaatataggcctattattgtcgttactattgttattaaaaataatcaataaatcaaatcattgaatgacaaacaacacatgtattagtttcccaggtatcaaaaaagccatgtgaatagaaatatttacagttttttttttttttaaatgcaaccatttgacattcaaattaaataacagcagccaatcagaactactagatatgtaacattcaaactataattaggtattatcaaaaggcctgctgcatggtgtgaacctcagcacctttataagatgactataatttgaatgtccttttttggttgtgaagtgaccttgggtgtcatgaaaggcgctttaaataaaatgtattattattattattattattattattattacaaacactaacagtagccaatcagaaacagctagcaatttaacattcaaatctatttttcattcaaattgttccaacggaaaacaagcttgcacttatcatggggtaaaagcaggattacacgcacgcacacacacacacacacacacacacacgcaacacgcacacgcacacacacacacacagaaacaaggttttcattttggtgatgacaaacgacttgaagaacgacacctactgccgaatggaaataagtttacaacctttgaaagttagtgagagccctttgttaatgcttagaagagtataagttagaagagtctaggttagaagagtctaggattgaagagtctaggattgaagagtctaggattgaagagtctaggattgaagagtctaggtttgaagagtctaggtttgaagagtctaggtttgaagagtctaggtttgaagagtctaggtttgaaagtctaggtttgctatcgcctgtcttgcgagtaaatagcagaaaaaaacgtttggagaagcgcaaccccacatcgcgctgcgttttgaggaggtggagtcccgtacagtaaacagtgacatctctgcctctatcgcttcaacaagaaagttttaaaacagcaaacacaagccctgaattgcccgggagtttgggggacagctaaatgtttgccaaacaacaaagcacagtcgatatctctcgctcgtaaaaaaaaataaaaaaatctctcgctcgtctcttttctctttttcttcgtgaaattaagctgccttcaggtacagtaggaaacgttgggttctataaaagatctgacgaaaaactgttactgtgaaatataaagtctacttgtgctacattggggggattaaagaatacatcaggacgtcgcaccaccctgcggcgattgctattttttctgaacgcagcttcacgctgaaatacggagctcatttaagacgatgctctgactTCCCGTTTccttgaaggcagcacggagctgcgccgaacaatgatccaccgtctcgtccagttgcagtgccgtgaactggcaggtttttaatgttgcagaaaacagttttttgcaagtagtttaagtgtaaacatgtattgttattgtgaatctttggtttaaactagctttcaaacaaacgccccccaagggcacctcaacgcccccctttccaaaatattgcttccaacgccccccatcatcttctgaacgccccctggggggcggtaccgcccccgttgagaaacactg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU49242 True 1723 lncRNA 0.40 1 8144541 8146263

Neighbor

gene id symbol gene type direction distance location
LOC120557574 LOC104939084,LOC103365882 coding upstream 1594 8140234 ~ 8142947 (+)
cdh4 LOC102194679,LOC102298797,LOC100702438 coding upstream 28510 7885752 ~ 8116031 (+)
LOC120557341 LOC106565946 coding upstream 374799 7762888 ~ 7769742 (+)
LOC120557338 NA coding upstream 393421 7728149 ~ 7751120 (+)
zmynd8 LOC103358838 coding upstream 417223 7709966 ~ 7727318 (+)
LOC120556871 NA coding downstream 24419 8170682 ~ 8177048 (+)
rae1 rae1 coding downstream 45440 8191703 ~ 8200687 (+)
LOC120557172 rbm38,LOC104939027,LOC101475440,LOC103365886,LOC107102025,LOC107384941 coding downstream 56017 8202280 ~ 8212838 (+)
arpc4l arpc4,LOC103358720 coding downstream 86819 8233082 ~ 8236649 (+)
si:dkey-202e22.2 LOC104952071,LOC103375511 coding downstream 183052 8329315 ~ 8334854 (+)
G36649 LOC104950789,LOC103358841 non-coding upstream 391904 7699642 ~ 7752637 (+)
G36638 NA non-coding upstream 480667 7662944 ~ 7663874 (+)
G36616 LOC103386327,LOC105417874 non-coding upstream 597506 7543986 ~ 7547035 (+)
G36609 NA non-coding upstream 612338 7531717 ~ 7532203 (+)
G36604 NA non-coding upstream 618578 7521180 ~ 7525963 (+)
G36728 NA non-coding downstream 1664 8147927 ~ 8148229 (+)
G36745 NA non-coding downstream 77995 8224258 ~ 8224772 (+)
G36754 NA non-coding downstream 93200 8239463 ~ 8244446 (+)
G36820 NA non-coding downstream 258981 8405244 ~ 8407693 (+)
G36826 LOC100705312 non-coding downstream 272041 8418304 ~ 8419581 (+)
hcfc1a hcfc1,LOC102799381,LOC102206223 other upstream 838198 7288907 ~ 7306343 (+)
G36458 LOC100304472,LOC107385856 other upstream 872173 7209996 ~ 7272368 (+)
si:dkey-245f22.3 NA other upstream 957327 7183199 ~ 7187214 (+)
setmar LOC100698471 other upstream 1506018 6635280 ~ 6638523 (+)
foxp1b foxp1 other upstream 1838398 6139463 ~ 6306143 (+)
G36744 NA other downstream 81499 8227762 ~ 8228720 (+)
prickle2b prickle2 other downstream 1613970 9760233 ~ 9856656 (+)
G37197 NA other downstream 2158924 10305187 ~ 10309996 (+)
glrx glrx other downstream 2241645 10387908 ~ 10396187 (+)
G37397 LOC102299939,LOC103353648,LOC103366902,LOC102208776,LOC100700987,LOC104921056 other downstream 2850967 10997230 ~ 11012909 (+)

Expression


Co-expression Network