si:dkey-202e22.2 (LOC104952071,LOC103375511)


Basic Information

Item Value
gene id si:dkey-202e22.2
gene name LOC104952071,LOC103375511
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 8329315 ~ 8334854 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798872.1
TGGACCTTGCTGGGACACGGAGCTCTCAGGTTGGCTGTGAATTAATGAAAAACCTTTACATGAATTAATTAGCTTTGAGAAGGACCTATCCTTTGCATCGTTTAGGCTAACACACAGTCACTTTTTTTATCGCGCAAAATCGATGAAGACAAGACACCAGGAAATTGGAAACATTTCGTTATGTCAAATATGGAGCGTTCATTCTTGGGCTAACCAATAATCCATTTGCTGCTACGGGGGAACACAGTCCACTTTTGTCAGAGAGATGCCCTGGCTGTTCCTGAGAATGCTTTGAACTTTATAAAAGATTCTTTTAACATTGTTCCTGGAAGGGCATCGGAAGAATACTCCTGGAATCATCTGCACACTTTGCGCATTGCGTAATTGGCAGGGAAATATGCGCTTGTCCGTTAGGAAGGCTACACATAATGTTGGGACTAATCTCTGCTGGAAGGCGTTTATCGCACCACGTTTGTTGTAAACACAGCAGAAACAAGGATGAGAGTGTTTAGTATGCGTGGGAAAGGTCGGCATCAGATGCTGCTGGCGCTCTGTTGGCTGTTTTTGGTTCTTATGAGGAGCGGAGCAGTTTCCAGATGTGTGGACCATGCCTGTAGTCCACCAATTGGGAACCTGGCTAGTGGCAGGACCATCCTCACCCACTCAAGCTGCTGTGGGAACAGCTCCTTCCCACGCAGCCCTTGCCCCCATCCTCCTGTAACCCCCCACCTCCTCTGCCCCGAGGACACCCACCCATCTGCTCACATGACTGATGACCCTTTCTTGCATCCAGATACCTGGTGGGCATCAGGTGCAGGCACCACCATGCAGGAGCAGCAGGATGAGATCCGCTTGGACCTTGAAGCACAATTCTGTCTGTCCCATGTAGTTTTAGTGTTCAGGTCACCACGGCCTGCTGCCATGGCCATTGAGCGTTCAGCTGACTTTGGAAAGACCTGGGAAGCTCTTAAGCTCTTTGCACACAATTGCAGCATGGAGTTTGGTTTGCCTGATGATTTTACTCAGCCAGGGTCTTTGTGTACATCCCGTTATACCagtgctacaccctgcagtgggGGGGAGGTAATATTACGGACACTAGACCCTAGCAGTGCTAAAACACTGGACCCTTACAGTCCAGAGGCCCTCGCCCGCCTCACACTCACTAACCTCCGCATCAGACTGCTAAAAGCTCAGACTTGTCCGGCACCTCTAAATCCACCTGCAGAATGGACAAGCCCCACGGCCTCAGCTCTGACTTCCACATCCTCCACAGAAAGCTCAGCCTCCGCACCTTATGCTATTTATACTTTACTGGCCAGAGGGACCTGCCTGTGCCATGGACATGCTGAGCATTGTGTACCATACAACAGCAGCCAAGACACAAGACAGGACAGTAACATGGTGTCTGGTAGGTGCCTATGTACTCACCACACAGCAGGAAATCACTGTGAGAAGTGTGCCCCGCTCTACAATGATCGTCCCTGGAGGCCTGCCAACAGCAACAGTGGGGAGTCCAACCCATGCCAGAAGTGCCAGTGCCACGGTCACGCAGATAGCTGTCACTTCTCTCAGCGGGCATGGCTTTCCTCCGGCGGCACCAGTGGGGGCGTTTGTGATGACTGCAGACACAACACTGTCGGGCGCAGGTGCCAACGCTGTCGCCACGGCTACCACCACCACCCATCCCTGCCCCTTAACTCcccccacacatgcacacGCTGCTGGTGTGATCCACAGGGCTCTTTGCCTCCTCGTCCTGGAGAGGAGAGACCCTGGTGCCACCCTAGAAGCGGGCAGTGCCACTGCAAATCTGGTGTAGGCGGCACAAGCTGCAGACACTGCCTGCCTGGCTATTGGGGTTTTGGAGAGGAGGGCTGTAAACCCTGCACTTGCACACACAGCTGTGATCCAACCACTGGGCAGTGTCTGGACAGTTACTCAAATAACCAGGTGTTCAATGTGCCCATTGGTGGAAAGATCCCTGATCTGGATCACATGTTCACAGTAGAAGAAGAGGTACAGTGGTCAAAGGAGCTTGCCGTCTCTGCGCTGCATTACACAGGAAAGTGTAGCTGTAAGCAGAAAAAGCTGAGAAGTGTGTCTGACCTCTGTAAGACCAAACATGATTATGTGATCAAAGCCATTGTGCTGTCTGCTCATGACAAAGGCAGCCACGCAGAAGTGCAGGTCAAAGTTCGCAAGGTCCTTCGATCAAGCCAAGTGGCTCTCTACTTGGGAACCATCCGCATCTATCCACTGCCGTGGACCAGCCGCGGCTGCACCTGTCCTATTCTCAACCCAGgtaTGGAGTACCTGCTGGCAGGCCCAGAGGAGGCTGGGACAGGCCGTCTACTGGTCACCATGCAGAGTGTGGTGGTCCCATGGACACCCCGACTTGGTCTACTTATATCAGAGAGCCTGAGGACTGGATGCACATGAACATAAACCCAAAAAGGCAGGACAGACTTCAGAGGATTTCTCAAGAAAATTtgagtggaaaaaaaatcagaaaatggACTGAAAACCGCTGGACAACATGCTTTATCACCAGGAGGAAATTATCCAAACTCATGATCAGTCCAGGTCACAACATTGAAGAAAGGTACTCACGACGTGTGAGTGTGCAACACAAAATAAAGACTAAAATGAATACCTGGATTTGTTAAGATCTGAGTTTAACAAATCTCTTATTCAATGTTTACCTCCTCTTTATTAGCAAAGAGAAATGTACAAAAGATTAAGGTAGTCGTATATAGAAAATATGTGACGGGGCAAAGTTCTTTGAATTTCAGATGGTTTCTAAAATATTTATTACTTCTTTCATAAATAGTAAgtataatacattttgaaagCCAAATATAATTTGGATTCAATAAAATGCTATGAAACTATCATTACTAATAAACAGGCAATATAACAAA
>XM_039798873.1
TGGACCTTGCTGGGACACGGAGCTCTCAGGTTGGCTGTGAATTAATGAAAAACCTTTACATGAATTAATTAGCTTTGAGAAGGACCTATCCTTTGCATCGTTTAGGCTAACACACAGTCACTTTTTTTATCGCGCAAAATCGATGAAGACAAGACACCAGGAAATTGGAAACATTTCGTTATGTCAAATATGGAGCGTTCATTCTTGGGCTAACCAATAATCCATTTGCTGCTACGGGGGAACACAGTCCACTTTTGTCAGAGAGATGCCCTGGCTGTTCCTGAGAATGCTTTGAACTTTATAAAAGATTCTTTTAACATTGTTCCTGGAAGGGCATCGGAAGAATACTCCTGGAATCATCTGCACACTTTGCGCATTGCGTAATTGGCAGGGAAATATGCGCTTGTCCGTTAGGAAGGCTACACATAATGTTGGGACTAATCTCTGCTGGAAGGCGTTTATCGCACCACGTTTGTTGTAAACACAGCAGAAACAAGGATGAGAGTGTTTAGTATGCGTGGGAAAGGTCGGCATCAGATGCTGCTGGCGCTCTGTTGGCTGTTTTTGGTTCTTATGAGGAGCGGAGCAGTTTCCAGATGTGTGGACCATGCCTGTAGTCCACCAATTGGGAACCTGGCTAGTGGCAGGACCATCCTCACCCACTCAAGCTGCTGTGGGAACAGCTCCTTCCCACGCAGCCCTTGCCCCCATCCTCCTGTAACCCCCCACCTCCTCTGCCCCGAGGACACCCACCCATCTGCTCACATGACTGATGACCCTTTCTTGCATCCAGATACCTGGTGGGCATCAGGTGCAGGCACCACCATGCAGGAGCAGCAGGATGAGATCCGCTTGGACCTTGAAGCACAATTCTGTCTGTCCCATGTAGTTTTAGTGTTCAGGTCACCACGGCCTGCTGCCATGGCCATTGAGCGTTCAGCTGACTTTGGAAAGACCTGGGAAGCTCTTAAGCTCTTTGCACACAATTGCAGCATGGAGTTTGGTTTGCCTGATGATTTTACTCAGCCAGGGTCTTTGTGTACATCCCGTTATACCagtgctacaccctgcagtgggGGGGAGGTAATATTACGGACACTAGACCCTAGCAGTGCTAAAACACTGGACCCTTACAGTCCAGAGGCCCTCGCCCGCCTCACACTCACTAACCTCCGCATCAGACTGCTAAAAGCTCAGACTTGTCCGGCACCTCTAAATCCACCTGCAGAATGGACAAGCCCCACGGCCTCAGCTCTGACTTCCACATCCTCCACAGAAAGCTCAGCCTCCGCACCTTATGCTATTTATACTTTACTGGCCAGAGGGACCTGCCTGTGCCATGGACATGCTGAGCATTGTGTACCATACAACAGCAGCCAAGACACAAGACAGGACAGTAACATGGTGTCTGGTAGGTGCCTATGTACTCACCACACAGCAGGAAATCACTGTGAGAAGTGTGCCCCGCTCTACAATGATCGTCCCTGGAGGCCTGCCAACAGCAACAGTGGGGAGTCCAACCCATGCCAGAAGTGCCAGTGCCACGGTCACGCAGATAGCTGTCACTTCTCTCAGCGGGCATGGCTTTCCTCCGGCGGCACCAGTGGGGGCGTTTGTGATGACTGCAGACACAACACTGTCGGGCGCAGGTGCCAACGCTGTCGCCACGGCTACCACCACCACCCATCCCTGCCCCTTAACTCcccccacacatgcacacGCTGCTGGTGTGATCCACAGGGCTCTTTGCCTCCTCGTCCTGGAGAGGAGAGACCCTGGTGCCACCCTAGAAGCGGGCAGTGCCACTGCAAATCTGGTGTAGGCGGCACAAGCTGCAGACACTGCCTGCCTGGCTATTGGGGTTTTGGAGAGGAGGGCTGTAAACCCTGCACTTGCACACACAGCTGTGATCCAACCACTGGGCAGTGTCTGGACAGTTACTCAAATAACCAGGTGTTCAATGTGCCCATTGGTGGAAAGATCCCTGATCTGGATCACATGTTCACAGTAGAAGAAGAGGTACAGTGGTCAAAGGAGCTTGCCGTCTCTGCGCTGCATTACACAGTGATCAAAGCCATTGTGCTGTCTGCTCATGACAAAGGCAGCCACGCAGAAGTGCAGGTCAAAGTTCGCAAGGTCCTTCGATCAAGCCAAGTGGCTCTCTACTTGGGAACCATCCGCATCTATCCACTGCCGTGGACCAGCCGCGGCTGCACCTGTCCTATTCTCAACCCAGgtaTGGAGTACCTGCTGGCAGGCCCAGAGGAGGCTGGGACAGGCCGTCTACTGGTCACCATGCAGAGTGTGGTGGTCCCATGGACACCCCGACTTGGTCTACTTATATCAGAGAGCCTGAGGACTGGATGCACATGAACATAAACCCAAAAAGGCAGGACAGACTTCAGAGGATTTCTCAAGAAAATTtgagtggaaaaaaaatcagaaaatggACTGAAAACCGCTGGACAACATGCTTTATCACCAGGAGGAAATTATCCAAACTCATGATCAGTCCAGGTCACAACATTGAAGAAAGGTACTCACGACGTGTGAGTGTGCAACACAAAATAAAGACTAAAATGAATACCTGGATTTGTTAAGATCTGAGTTTAACAAATCTCTTATTCAATGTTTACCTCCTCTTTATTAGCAAAGAGAAATGTACAAAAGATTAAGGTAGTCGTATATAGAAAATATGTGACGGGGCAAAGTTCTTTGAATTTCAGATGGTTTCTAAAATATTTATTACTTCTTTCATAAATAGTAAgtataatacattttgaaagCCAAATATAATTTGGATTCAATAAAATGCTATGAAACTATCATTACTAATAAACAGGCAATATAACAAA
>XM_039798875.1
TGGACCTTGCTGGGACACGGAGCTCTCAGGTTGGCTGTGAATTAATGAAAAACCTTTACATGAATTAATTAGCTTTGAGAAGGACCTATCCTTTGCATCGTTTAGGCTAACACACAGTCACTTTTTTTATCGCGCAAAATCGATGAAGACAAGACACCAGGAAATTGGAAACATTTCGTTATGTCAAATATGGAGCGTTCATTCTTGGGCTAACCAATAATCCATTTGCTGCTACGGGGGAACACAGTCCACTTTTGTCAGAGAGATGCCCTGGCTGTTCCTGAGAATGCTTTGAACTTTATAAAAGATTCTTTTAACATTGTTCCTGGAAGGGCATCGGAAGAATACTCCTGGAATCATCTGCACACTTTGCGCATTGCGTAATTGGCAGGGAAATATGCGCTTGTCCGTTAGGAAGGCTACACATAATGTTGGGACTAATCTCTGCTGGAAGGCGTTTATCGCACCACGTTTGTTGTAAACACAGCAGAAACAAGGATGAGAGTGTTTAGTATGCGTGGGAAAGGTCGGCATCAGATGCTGCTGGCGCTCTGTTGGCTGTTTTTGGTTCTTATGAGGAGCGGAGCAGTTTCCAGATGTGTGGACCATGCCTGTAGTCCACCAATTGGGAACCTGGCTAGTGGCAGGACCATCCTCACCCACTCAAGCTGCTGTGGGAACAGCTCCTTCCCACGCAGCCCTTGCCCCCATCCTCCTGTAACCCCCCACCTCCTCTGCCCCGAGGACACCCACCCATCTGCTCACATGACTGATGACCCTTTCTTGCATCCAGATACCTGGTGGGCATCAGGTGCAGGCACCACCATGCAGGAGCAGCAGGATGAGATCCGCTTGGACCTTGAAGCACAATTCTGTCTGTCCCATGTAGTTTTAGTGTTCAGGTCACCACGGCCTGCTGCCATGGCCATTGAGCGTTCAGCTGACTTTGGAAAGACCTGGGAAGCTCTTAAGCTCTTTGCACACAATTGCAGCATGGAGTTTGGTTTGCCTGATGATTTTACTCAGCCAGGGTCTTTGTGTACATCCCGTTATACCagtgctacaccctgcagtgggGGGGAGGTAATATTACGGACACTAGACCCTAGCAGTGCTAAAACACTGGACCCTTACAGTCCAGAGGCCCTCGCCCGCCTCACACTCACTAACCTCCGCATCAGACTGCTAAAAGCTCAGACTTGTCCGGCACCTCTAAATCCACCTGCAGAATGGACAAGCCCCACGGCCTCAGCTCTGACTTCCACATCCTCCACAGAAAGCTCAGCCTCCGCACCTTATGCTATTTATACTTTACTGGCCAGAGGGACCTGCCTGTGCCATGGACATGCTGAGCATTGTGTACCATACAACAGCAGCCAAGACACAAGACAGGACAGTAACATGGTGTCTGGTAGGTGCCTATGTACTCACCACACAGCAGGAAATCACTGTGAGAAGTGTGCCCCGCTCTACAATGATCGTCCCTGGAGGCCTGCCAACAGCAACAGTGGGGAGTCCAACCCATGCCAGAAGTGCCAGTGCCACGGTCACGCAGATAGCTGTCACTTCTCTCAGCGGGCATGGCTTTCCTCCGGCGGCACCAGTGGGGGCGTTTGTGATGACTGCAGACACAACACTGTCGGGCGCAGGTGCCAACGCTGTCGCCACGGCTACCACCACCACCCATCCCTGCCCCTTAACTCcccccacacatgcacacGCTGCTGGTGTGATCCACAGGGCTCTTTGCCTCCTCGTCCTGGAGAGGAGAGACCCTGGTGCCACCCTAGAAGCGGGCAGTGCCACTGCAAATCTGGTGTAGGCGGCACAAGCTGCAGACACTGCCTGCCTGGCTATTGGGGTTTTGGAGAGGAGGGCTGTAAACCCTGCACTTGCACACACAGCTGTGATCCAACCACTGGGCAGTGTCTGGACAGTTACTCAAATAACCAGGTGTTCAATGTGCCCATTGGTGGAAAGATCCCTGATCTGGATCACATGTTCACAGTAGAAGAAGAGGTACAGTGGTCAAAGGAGCTTGCCGTCTCTGCGCTGCATTACACAGGAAAGTGTAGCTGTAAGCAGAAAAAGCTGAGAAGTGTGTCTGACCTCTGTAAGACCAAACATGATTATGTCATCTGTTTTTCCTGTGTGGCCCATGACAGTGATCAAAGCCATTGTGCTGTCTGCTCATGACAAAGGCAGCCACGCAGAAGTGCAGGTCAAAGTTCGCAAGGTCCTTCGATCAAGCCAAGTGGCTCTCTACTTGGGAACCATCCGCATCTATCCACTGCCGTGGACCAGCCGCGGCTGCACCTGTCCTATT

Function

NR:

description
PREDICTED: netrin-4-like

GO:

id name namespace
GO:0005576 extracellular region cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798872.1 True 2924 mRNA 0.49 10 8329315 8334854
XM_039798873.1 False 2855 mRNA 0.49 9 8329315 8334854
XM_039798875.1 False 2326 mRNA 0.52 9 8329315 8334005

Neighbor

gene id symbol gene type direction distance location
arpc4l arpc4,LOC103358720 coding upstream 92666 8233082 ~ 8236649 (+)
LOC120557172 rbm38,LOC104939027,LOC101475440,LOC103365886,LOC107102025,LOC107384941 coding upstream 116477 8202280 ~ 8212838 (+)
rae1 rae1 coding upstream 128628 8191703 ~ 8200687 (+)
LOC120556871 NA coding upstream 152267 8170682 ~ 8177048 (+)
LOC120557574 LOC104939084,LOC103365882 coding upstream 186368 8140234 ~ 8142947 (+)
hmces hmces coding downstream 115847 8450701 ~ 8453316 (+)
rpn1 rpn1,LOC107091506 coding downstream 131746 8466600 ~ 8474022 (+)
gata2a LOC103359878,LOC102204047,LOC100705840,LOC101487525,LOC102779036 coding downstream 148336 8483190 ~ 8496659 (+)
trnae-cuc_4 NA coding downstream 282144 8616998 ~ 8617069 (+)
trnae-cuc_5 NA coding downstream 307176 8642030 ~ 8642101 (+)
G36754 NA non-coding upstream 84869 8239463 ~ 8244446 (+)
G36745 NA non-coding upstream 104543 8224258 ~ 8224772 (+)
G36728 NA non-coding upstream 181086 8147927 ~ 8148229 (+)
G36727 NA non-coding upstream 183052 8144541 ~ 8146263 (+)
G36649 LOC104950789,LOC103358841 non-coding upstream 576678 7699642 ~ 7752637 (+)
G36820 NA non-coding downstream 70390 8405244 ~ 8407693 (+)
G36826 LOC100705312 non-coding downstream 83450 8418304 ~ 8419581 (+)
G36827 LOC100705312,LOC102203484,LOC101465335,LOC104933013 non-coding downstream 87319 8422173 ~ 8425531 (+)
G36836 NA non-coding downstream 110538 8445392 ~ 8445591 (+)
G36887 LOC101487045 non-coding downstream 275507 8610361 ~ 8611088 (+)
G36744 NA other upstream 100595 8227762 ~ 8228720 (+)
hcfc1a hcfc1,LOC102799381,LOC102206223 other upstream 1022972 7288907 ~ 7306343 (+)
G36458 LOC100304472,LOC107385856 other upstream 1056947 7209996 ~ 7272368 (+)
si:dkey-245f22.3 NA other upstream 1142101 7183199 ~ 7187214 (+)
setmar LOC100698471 other upstream 1690792 6635280 ~ 6638523 (+)
prickle2b prickle2 other downstream 1425379 9760233 ~ 9856656 (+)
G37197 NA other downstream 1970333 10305187 ~ 10309996 (+)
glrx glrx other downstream 2053054 10387908 ~ 10396187 (+)
G37397 LOC102299939,LOC103353648,LOC103366902,LOC102208776,LOC100700987,LOC104921056 other downstream 2662376 10997230 ~ 11012909 (+)
G37525 evc2 other downstream 3017224 11352078 ~ 11352387 (+)

Expression


Co-expression Network